Click here to switch to the map view.

The map label for this gene is 146302505

Identifier: 146302505

GI number: 146302505

Start: 5771187

End: 5772269

Strand: Reverse

Name: 146302505

Synonym: Fjoh_4778

Alternate gene names: NA

Gene position: 5772269-5771187 (Counterclockwise)

Preceding gene: 146302509

Following gene: 146302500

Centisome position: 94.68

GC content: 34.35

Gene sequence:

>1083_bases
ATGAAACAAATTTTAATTTATATGAAAAAACTGATTTTATTTTGTGGTCTTTTTGTTTTGTTAATGTCTTTTACTTCATT
TAATTACAATAGTAAAAAAGCATTTTACGGCGGATTTACCTCTATGACAATTGATACTTTGTTTAATGATAGAATTAGTA
TAAGAGCAATTGTAATAGACAAAAATAAAGTTTGGTATGGCGGAGATAACTCTCGTTTTGGATTTTATGATTTAGATAAA
AAAGAAAAATTTGAAGAGCACATTTACCGTGATACGCTTAAATTAGAATTTAGAAGCATTGCACAAACTTCTAAAGATAT
TTTTTTGCTGAGTGTCGCAAATCCTGCACTCCTATATTCTGTTTCCAAAAAAGATCATAAAGTTAAATTGGTTTATAAAG
AAGTTAACCCAAAGGTGTTTTACGACAGTATGCAGTTTTGGAACGATAAGGAAGGAATTGCTATTGGCGATCCAACAGAA
GATACTTTTTCAGTAATTGTAACTCGCGATGGGGGTGAAACCTGGACAAAATTATTGTCAGATAAACTGCCGACTAATGC
AGTCGGTGAAGCCGCTTTTGCTGCAAGTAATACCAATATAGTGATAAAAGGAAACGATACCTGGCTGGTTTCGGGCGGAA
AAAAAGCACGTGTTTTTTATTCTCCTGATAAAGCAAAAACATGGAAAGTGGTTGAAACTCCAATTGTTCAGGGCAAACAA
ATGACTGGTATTTTTACAGCAGATTTTTACGATTCTAAGCAGGGATTTATTGCAGGAGGAGATTACGATAAACCAAATAG
TAAAATTAATAATAAAGCTTTTACTAAAGACGGCGGAAAAACCTGGGAGCTGATAGGGCAGGAAATGGGCTTTGGTTACG
CATCATGTGTGCAGTATGTTCCGGGAGGAAATGGAAGAGAAATCATTTGCGTAGGTTCTGAGGGGATACAATATTCTCAA
AATGGAGGAGAAAACTGGACACAGCTTTCTACTGATTCAAAGTTTTTTACGATTCGTTTCGTAAATAGAAATACTGCAAT
TGCAGCCGGATATAACAAAGTTGTCCGTCTTAACTTTAAATAA

Upstream 100 bases:

>100_bases
TTTTGAGCTTGATTTTATTGAACAAATAAGGTCTGAAAATTATTATTTTCTGAAAAAAAAGGAAACCTATTTGAGATGTT
ATAAATAATCGTATTTTAGC

Downstream 100 bases:

>100_bases
AAAAACAAGAACCCTAAATAATAAAGTAAGTATTATTATATAGGGTTCTTATCGCTGTTGTATTGTAATGACAATTAATT
TTTGCCTGCTTTATCTCGGT

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Photosystem II Stability/Assembly Protein; Glycosyl Hydrolase BNR Repeat-Containing Protein; Secreted Protein Containing Glycosyl Hydrolase BNR Repeats; Photosystem II Stability/Assembly Factor-Like Protein; Glycosyl Hydrolase; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKQILIYMKKLILFCGLFVLLMSFTSFNYNSKKAFYGGFTSMTIDTLFNDRISIRAIVIDKNKVWYGGDNSRFGFYDLDK
KEKFEEHIYRDTLKLEFRSIAQTSKDIFLLSVANPALLYSVSKKDHKVKLVYKEVNPKVFYDSMQFWNDKEGIAIGDPTE
DTFSVIVTRDGGETWTKLLSDKLPTNAVGEAAFAASNTNIVIKGNDTWLVSGGKKARVFYSPDKAKTWKVVETPIVQGKQ
MTGIFTADFYDSKQGFIAGGDYDKPNSKINNKAFTKDGGKTWELIGQEMGFGYASCVQYVPGGNGREIICVGSEGIQYSQ
NGGENWTQLSTDSKFFTIRFVNRNTAIAAGYNKVVRLNFK

Sequences:

>Translated_360_residues
MKQILIYMKKLILFCGLFVLLMSFTSFNYNSKKAFYGGFTSMTIDTLFNDRISIRAIVIDKNKVWYGGDNSRFGFYDLDK
KEKFEEHIYRDTLKLEFRSIAQTSKDIFLLSVANPALLYSVSKKDHKVKLVYKEVNPKVFYDSMQFWNDKEGIAIGDPTE
DTFSVIVTRDGGETWTKLLSDKLPTNAVGEAAFAASNTNIVIKGNDTWLVSGGKKARVFYSPDKAKTWKVVETPIVQGKQ
MTGIFTADFYDSKQGFIAGGDYDKPNSKINNKAFTKDGGKTWELIGQEMGFGYASCVQYVPGGNGREIICVGSEGIQYSQ
NGGENWTQLSTDSKFFTIRFVNRNTAIAAGYNKVVRLNFK
>Mature_360_residues
MKQILIYMKKLILFCGLFVLLMSFTSFNYNSKKAFYGGFTSMTIDTLFNDRISIRAIVIDKNKVWYGGDNSRFGFYDLDK
KEKFEEHIYRDTLKLEFRSIAQTSKDIFLLSVANPALLYSVSKKDHKVKLVYKEVNPKVFYDSMQFWNDKEGIAIGDPTE
DTFSVIVTRDGGETWTKLLSDKLPTNAVGEAAFAASNTNIVIKGNDTWLVSGGKKARVFYSPDKAKTWKVVETPIVQGKQ
MTGIFTADFYDSKQGFIAGGDYDKPNSKINNKAFTKDGGKTWELIGQEMGFGYASCVQYVPGGNGREIICVGSEGIQYSQ
NGGENWTQLSTDSKFFTIRFVNRNTAIAAGYNKVVRLNFK

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40577; Mature: 40577

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILIYMKKLILFCGLFVLLMSFTSFNYNSKKAFYGGFTSMTIDTLFNDRISIRAIVID
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHEEEEHHHCCCEEEEEEEEE
KNKVWYGGDNSRFGFYDLDKKEKFEEHIYRDTLKLEFRSIAQTSKDIFLLSVANPALLYS
CCEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEE
VSKKDHKVKLVYKEVNPKVFYDSMQFWNDKEGIAIGDPTEDTFSVIVTRDGGETWTKLLS
ECCCCCEEEEEEEECCCEEEEECHHHCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHH
DKLPTNAVGEAAFAASNTNIVIKGNDTWLVSGGKKARVFYSPDKAKTWKVVETPIVQGKQ
CCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCE
MTGIFTADFYDSKQGFIAGGDYDKPNSKINNKAFTKDGGKTWELIGQEMGFGYASCVQYV
EEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHCC
PGGNGREIICVGSEGIQYSQNGGENWTQLSTDSKFFTIRFVNRNTAIAAGYNKVVRLNFK
CCCCCCEEEEECCCCCEECCCCCCCCEEECCCCEEEEEEEECCCEEEEECCCEEEEEEEC
>Mature Secondary Structure
MKQILIYMKKLILFCGLFVLLMSFTSFNYNSKKAFYGGFTSMTIDTLFNDRISIRAIVID
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHEEEEHHHCCCEEEEEEEEE
KNKVWYGGDNSRFGFYDLDKKEKFEEHIYRDTLKLEFRSIAQTSKDIFLLSVANPALLYS
CCEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEE
VSKKDHKVKLVYKEVNPKVFYDSMQFWNDKEGIAIGDPTEDTFSVIVTRDGGETWTKLLS
ECCCCCEEEEEEEECCCEEEEECHHHCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHH
DKLPTNAVGEAAFAASNTNIVIKGNDTWLVSGGKKARVFYSPDKAKTWKVVETPIVQGKQ
CCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCE
MTGIFTADFYDSKQGFIAGGDYDKPNSKINNKAFTKDGGKTWELIGQEMGFGYASCVQYV
EEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHCC
PGGNGREIICVGSEGIQYSQNGGENWTQLSTDSKFFTIRFVNRNTAIAAGYNKVVRLNFK
CCCCCCEEEEECCCCCEECCCCCCCCEEECCCCEEEEEEEECCCEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA