| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is menE [H]
Identifier: 146302509
GI number: 146302509
Start: 5777423
End: 5778469
Strand: Reverse
Name: menE [H]
Synonym: Fjoh_4782
Alternate gene names: 146302509
Gene position: 5778469-5777423 (Counterclockwise)
Preceding gene: 146302510
Following gene: 146302505
Centisome position: 94.78
GC content: 34.38
Gene sequence:
>1047_bases ATGCTAAACTTAACTCATAAAAACGTACATAACTATTTTAAGCTCGACGGTTATCATTTAAATGCAGCTGATTTATGCCG AATTGGCTACAGTTTTATTAAAGAAGGCGATGCCTATGAGCGCGCAATTGGTGAATTTTTTCTGGATTGGTTCGATCATA AGGACTATATCGAAATGACAACATCAGGAACAACCGGACTTCCTAAATTAGTAAGATTAGAAAAACAAGCCATGATTCAG TCTGCATTGGCAACAGGAGATTTCTTCGGATTAGAGCCGGGAAATAAAGCATTATTGTGTCTGCCGACTCAGTTTATTGC AGGAAAAATGATGCTTGTGCGCAGTTTGATTTTAGGTCTGGAATTAGATGTTACACTACCAAGTACTGAGCCTTTGGCTT ACAATAATAAGCAATATGATTTTGTAGCAATGGTTCCGTTACAAGTTCAAAATTCAATTGAAAAGCTGGGAAATATTAAA AAGCTGATTATTGGCGGTGCAAAAATGGATAGTGCTCTCGAAGAAAAGCTTTTGCCATTAAAGAAAACAGAAATTTACGA AACCTACGGAATGACAGAAACAATTACGCATATTGCGGCTAAAAAAGTAGGTGAAACTGCTTTTACGATTCTGCCAAATG TTAAAATTGAGAAAGATGACCGAGGCTGTTTAGTTATTTATGTTGCTTCGATTTCTGATGAACCAATTGTAACCAATGAT TTAGTTGATTTAGTAAATGAAAATCAGTTTGTTTTTTTGGGAAGAATCGATAATGTCATTAACAGCGGGGGAGTAAAGCT GATTCCTGAACAGATTGAAGCTAAATTAACAGGCAGAATTACAAACCGATTTTTTGTAACTGGTGTTCCTGATACAGTTT TAGGAGAAAAATTGATTTTAGTAATTGAAGGGGAGAAGTATGATTTTTCGGCTGATTTTTTTGATGTTTTAGGAAAATTT GAAAAACCCAAAGAAATTGTTTTTGTTCCGAAATTTAAAGAAAATGAAAACGGAAAGTTATTACGCAAATCTAGTTTGAA AGTTTAA
Upstream 100 bases:
>100_bases AAAAATACAAATGGACAAACTGGAAAGAAAAACTAACCGGAATAATTGACGAAAAAAATAATGAAACAGCAGAATTTTTA AACTTAAATTAAAATTTATT
Downstream 100 bases:
>100_bases AACTTTAATTTGAGGAGTATTCTTTTTTATTAATATGTAATCTCTAAGAGATATTTGAGAACTCCTTTTGGAGTTGTAGA TCTAGACAAGAACCACATAA
Product: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLNLTHKNVHNYFKLDGYHLNAADLCRIGYSFIKEGDAYERAIGEFFLDWFDHKDYIEMTTSGTTGLPKLVRLEKQAMIQ SALATGDFFGLEPGNKALLCLPTQFIAGKMMLVRSLILGLELDVTLPSTEPLAYNNKQYDFVAMVPLQVQNSIEKLGNIK KLIIGGAKMDSALEEKLLPLKKTEIYETYGMTETITHIAAKKVGETAFTILPNVKIEKDDRGCLVIYVASISDEPIVTND LVDLVNENQFVFLGRIDNVINSGGVKLIPEQIEAKLTGRITNRFFVTGVPDTVLGEKLILVIEGEKYDFSADFFDVLGKF EKPKEIVFVPKFKENENGKLLRKSSLKV
Sequences:
>Translated_348_residues MLNLTHKNVHNYFKLDGYHLNAADLCRIGYSFIKEGDAYERAIGEFFLDWFDHKDYIEMTTSGTTGLPKLVRLEKQAMIQ SALATGDFFGLEPGNKALLCLPTQFIAGKMMLVRSLILGLELDVTLPSTEPLAYNNKQYDFVAMVPLQVQNSIEKLGNIK KLIIGGAKMDSALEEKLLPLKKTEIYETYGMTETITHIAAKKVGETAFTILPNVKIEKDDRGCLVIYVASISDEPIVTND LVDLVNENQFVFLGRIDNVINSGGVKLIPEQIEAKLTGRITNRFFVTGVPDTVLGEKLILVIEGEKYDFSADFFDVLGKF EKPKEIVFVPKFKENENGKLLRKSSLKV >Mature_348_residues MLNLTHKNVHNYFKLDGYHLNAADLCRIGYSFIKEGDAYERAIGEFFLDWFDHKDYIEMTTSGTTGLPKLVRLEKQAMIQ SALATGDFFGLEPGNKALLCLPTQFIAGKMMLVRSLILGLELDVTLPSTEPLAYNNKQYDFVAMVPLQVQNSIEKLGNIK KLIIGGAKMDSALEEKLLPLKKTEIYETYGMTETITHIAAKKVGETAFTILPNVKIEKDDRGCLVIYVASISDEPIVTND LVDLVNENQFVFLGRIDNVINSGGVKLIPEQIEAKLTGRITNRFFVTGVPDTVLGEKLILVIEGEKYDFSADFFDVLGKF EKPKEIVFVPKFKENENGKLLRKSSLKV
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=307, Percent_Identity=25.0814332247557, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 39000; Mature: 39000
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLTHKNVHNYFKLDGYHLNAADLCRIGYSFIKEGDAYERAIGEFFLDWFDHKDYIEMT CCCCCCCCCCCEEEECCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEE TSGTTGLPKLVRLEKQAMIQSALATGDFFGLEPGNKALLCLPTQFIAGKMMLVRSLILGL CCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECHHHHHHHHHHHHHHHHCC ELDVTLPSTEPLAYNNKQYDFVAMVPLQVQNSIEKLGNIKKLIIGGAKMDSALEEKLLPL EEEEECCCCCCCEECCCCEEEEEEECHHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCC KKTEIYETYGMTETITHIAAKKVGETAFTILPNVKIEKDDRGCLVIYVASISDEPIVTND CHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCEEECCCCCEEEEEEEECCCCCCCHHH LVDLVNENQFVFLGRIDNVINSGGVKLIPEQIEAKLTGRITNRFFVTGVPDTVLGEKLIL HHHHHCCCCEEEEEEHHHHHCCCCCEEEHHHHHHHHHEEEECEEEEECCCCHHCCCEEEE VIEGEKYDFSADFFDVLGKFEKPKEIVFVPKFKENENGKLLRKSSLKV EEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCCCC >Mature Secondary Structure MLNLTHKNVHNYFKLDGYHLNAADLCRIGYSFIKEGDAYERAIGEFFLDWFDHKDYIEMT CCCCCCCCCCCEEEECCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEE TSGTTGLPKLVRLEKQAMIQSALATGDFFGLEPGNKALLCLPTQFIAGKMMLVRSLILGL CCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECHHHHHHHHHHHHHHHHCC ELDVTLPSTEPLAYNNKQYDFVAMVPLQVQNSIEKLGNIKKLIIGGAKMDSALEEKLLPL EEEEECCCCCCCEECCCCEEEEEEECHHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCC KKTEIYETYGMTETITHIAAKKVGETAFTILPNVKIEKDDRGCLVIYVASISDEPIVTND CHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCEEECCCCCEEEEEEEECCCCCCCHHH LVDLVNENQFVFLGRIDNVINSGGVKLIPEQIEAKLTGRITNRFFVTGVPDTVLGEKLIL HHHHHCCCCEEEEEEHHHHHCCCCCEEEHHHHHHHHHEEEECEEEEECCCCHHCCCEEEE VIEGEKYDFSADFFDVLGKFEKPKEIVFVPKFKENENGKLLRKSSLKV EEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]