| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302461
Identifier: 146302461
GI number: 146302461
Start: 5724047
End: 5725342
Strand: Reverse
Name: 146302461
Synonym: Fjoh_4734
Alternate gene names: NA
Gene position: 5725342-5724047 (Counterclockwise)
Preceding gene: 146302467
Following gene: 146302460
Centisome position: 93.91
GC content: 31.17
Gene sequence:
>1296_bases ATGAAAACAACCTTATTATTTTTTTTATTTTTTGGATTTATAGGCTATAGCCAAGACAAAGAAAGCCGAATAGTTACTAA AATTATTGAAATCGATTTAAGCGAACCTAATTCAAATAGCATTAAAATGTGTAATGATGTAGGATGTACGCCTGTAGAAA ATAAAAAATGGCTTTCTGCAAAATGTAGTGAAATGATTGCGGTTAAATTATTAAACGCTAATCCTTTTAAATATACTTAT AAAATTGATACTAAAGAAATCTCTTTTTTTAATGATCAAAGTGCGACAGGAGAAAACTTAAAAGCAAAAGCAAAAATAAG TGCAGATAGCACGTTTAAATTATTGTCTTTTTTTCCTGATAGAGATAAAATGTATATTAAAAACATTATTGACCAAAATC AGCAATTAGCTCAAGGTATCGATAGCTTAGGCTACGAAGTAAAGAGTCTTTATGGAATTTTAAAGCAAAAAAACACACTA AAAGCAAATGATTACGCTCCGAGAAAAGATTTCCTAAATAAAGCAAAAGCACAGTTGAGAAATAGTTATGAATTGTTGAA TGTTTTAGAACAGTTTAGTGACAATGAACAATATGGAACAGTTAAAAGTAGTCTAATCGAAACAAAAGTAAAAGCTGAAA AAAGCATTGATTCAATTATTGAAAAATTCTACAGCATTGATTTTGATGTTTATACGCGACCAATCGACGTACAAGGTAAA AATATTGATGTTGTAGAATTCACAATTAATCAATCTAATAAAGAAACCAAAAAGAAAGATGAAAATTTCGATAGTAAACC GTATAATATCTGGATAAAAGGCGGTTTAAAAATTGATGTAAGTGCGGGAGTGTTTTTCACTTCGCTTTACGATTCAGAAT TTAGTACAAAAGACGATCCAGCCATTGCAGGCAATAAAATTATTACTCTAAAAAATGGAGGAGATTATGATTTAGCATTT GGTTCGACAATTAATACTTATATGCGTATGAATTCCTGGGTTGTGCCAACACTTAACTTTGGTGCAGTCATAACTCAAAA TCAAAAGTTGCAGATACTTTTAGGAGGCGGGCTTATATTGGGCAAGCAAGAACGCATTATTTTTTCTGGCGGGCTTACTA TGGGGAAAGTTACTAGAATTGCAGACTCTTATTCTGTTGGTGGTTCTTATAATCTGGGAAATTCCGGAGACGTTCCTACG CAAAACCAGTTTAAATTTGGGCACTTTTTTGGAATTACCTATAATTTAACCAAAGTTAAAAAAATAAGCCTCGATAAAGG AATCGAACAAAACTAG
Upstream 100 bases:
>100_bases AAAGAAGAATGTAAGAAAAAAAATATCACCCAAAAGGGTAATTGATTGGTGTAGTGATCTCTAAATACATTTGATACGTT AACTAAAAACATTAGAAATC
Downstream 100 bases:
>100_bases ATAAAGAGACTTTTTCTTATTTTGGTGAAAAAGAAATTTTATACCAATAAAAACCCAAACCCTGCAAATACCAATTTGCA GGGTATTTTTTTGCAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKTTLLFFLFFGFIGYSQDKESRIVTKIIEIDLSEPNSNSIKMCNDVGCTPVENKKWLSAKCSEMIAVKLLNANPFKYTY KIDTKEISFFNDQSATGENLKAKAKISADSTFKLLSFFPDRDKMYIKNIIDQNQQLAQGIDSLGYEVKSLYGILKQKNTL KANDYAPRKDFLNKAKAQLRNSYELLNVLEQFSDNEQYGTVKSSLIETKVKAEKSIDSIIEKFYSIDFDVYTRPIDVQGK NIDVVEFTINQSNKETKKKDENFDSKPYNIWIKGGLKIDVSAGVFFTSLYDSEFSTKDDPAIAGNKIITLKNGGDYDLAF GSTINTYMRMNSWVVPTLNFGAVITQNQKLQILLGGGLILGKQERIIFSGGLTMGKVTRIADSYSVGGSYNLGNSGDVPT QNQFKFGHFFGITYNLTKVKKISLDKGIEQN
Sequences:
>Translated_431_residues MKTTLLFFLFFGFIGYSQDKESRIVTKIIEIDLSEPNSNSIKMCNDVGCTPVENKKWLSAKCSEMIAVKLLNANPFKYTY KIDTKEISFFNDQSATGENLKAKAKISADSTFKLLSFFPDRDKMYIKNIIDQNQQLAQGIDSLGYEVKSLYGILKQKNTL KANDYAPRKDFLNKAKAQLRNSYELLNVLEQFSDNEQYGTVKSSLIETKVKAEKSIDSIIEKFYSIDFDVYTRPIDVQGK NIDVVEFTINQSNKETKKKDENFDSKPYNIWIKGGLKIDVSAGVFFTSLYDSEFSTKDDPAIAGNKIITLKNGGDYDLAF GSTINTYMRMNSWVVPTLNFGAVITQNQKLQILLGGGLILGKQERIIFSGGLTMGKVTRIADSYSVGGSYNLGNSGDVPT QNQFKFGHFFGITYNLTKVKKISLDKGIEQN >Mature_431_residues MKTTLLFFLFFGFIGYSQDKESRIVTKIIEIDLSEPNSNSIKMCNDVGCTPVENKKWLSAKCSEMIAVKLLNANPFKYTY KIDTKEISFFNDQSATGENLKAKAKISADSTFKLLSFFPDRDKMYIKNIIDQNQQLAQGIDSLGYEVKSLYGILKQKNTL KANDYAPRKDFLNKAKAQLRNSYELLNVLEQFSDNEQYGTVKSSLIETKVKAEKSIDSIIEKFYSIDFDVYTRPIDVQGK NIDVVEFTINQSNKETKKKDENFDSKPYNIWIKGGLKIDVSAGVFFTSLYDSEFSTKDDPAIAGNKIITLKNGGDYDLAF GSTINTYMRMNSWVVPTLNFGAVITQNQKLQILLGGGLILGKQERIIFSGGLTMGKVTRIADSYSVGGSYNLGNSGDVPT QNQFKFGHFFGITYNLTKVKKISLDKGIEQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48483; Mature: 48483
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLLFFLFFGFIGYSQDKESRIVTKIIEIDLSEPNSNSIKMCNDVGCTPVENKKWLSA CCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHH KCSEMIAVKLLNANPFKYTYKIDTKEISFFNDQSATGENLKAKAKISADSTFKLLSFFPD HHHHEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCEEHHHHCCC RDKMYIKNIIDQNQQLAQGIDSLGYEVKSLYGILKQKNTLKANDYAPRKDFLNKAKAQLR CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH NSYELLNVLEQFSDNEQYGTVKSSLIETKVKAEKSIDSIIEKFYSIDFDVYTRPIDVQGK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEECCCC NIDVVEFTINQSNKETKKKDENFDSKPYNIWIKGGLKIDVSAGVFFTSLYDSEFSTKDDP CEEEEEEEECCCCCHHHHHCCCCCCCCEEEEEECCEEEEEECCEEEEEEECCCCCCCCCC AIAGNKIITLKNGGDYDLAFGSTINTYMRMNSWVVPTLNFGAVITQNQKLQILLGGGLIL CCCCCEEEEEECCCCEEEEECCHHHHHHHCCCEEEEEECCCEEEECCCEEEEEEECCEEE GKQERIIFSGGLTMGKVTRIADSYSVGGSYNLGNSGDVPTQNQFKFGHFFGITYNLTKVK CCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEE KISLDKGIEQN EEHHCCCCCCC >Mature Secondary Structure MKTTLLFFLFFGFIGYSQDKESRIVTKIIEIDLSEPNSNSIKMCNDVGCTPVENKKWLSA CCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHH KCSEMIAVKLLNANPFKYTYKIDTKEISFFNDQSATGENLKAKAKISADSTFKLLSFFPD HHHHEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCEEHHHHCCC RDKMYIKNIIDQNQQLAQGIDSLGYEVKSLYGILKQKNTLKANDYAPRKDFLNKAKAQLR CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH NSYELLNVLEQFSDNEQYGTVKSSLIETKVKAEKSIDSIIEKFYSIDFDVYTRPIDVQGK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEECCCC NIDVVEFTINQSNKETKKKDENFDSKPYNIWIKGGLKIDVSAGVFFTSLYDSEFSTKDDP CEEEEEEEECCCCCHHHHHCCCCCCCCEEEEEECCEEEEEECCEEEEEEECCCCCCCCCC AIAGNKIITLKNGGDYDLAFGSTINTYMRMNSWVVPTLNFGAVITQNQKLQILLGGGLIL CCCCCEEEEEECCCCEEEEECCHHHHHHHCCCEEEEEECCCEEEECCCEEEEEEECCEEE GKQERIIFSGGLTMGKVTRIADSYSVGGSYNLGNSGDVPTQNQFKFGHFFGITYNLTKVK CCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEE KISLDKGIEQN EEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA