| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302458
Identifier: 146302458
GI number: 146302458
Start: 5717495
End: 5717995
Strand: Reverse
Name: 146302458
Synonym: Fjoh_4731
Alternate gene names: NA
Gene position: 5717995-5717495 (Counterclockwise)
Preceding gene: 146302459
Following gene: 146302457
Centisome position: 93.79
GC content: 31.54
Gene sequence:
>501_bases ATGCAAAACAATACACTAGAAAAATACAAAAAAGCAATTAGAAAAAAATACGACATAGAAAAAGAAGGCAGATACTTTGA TTATTTGTACAAGCCTTCTCGTGGAAAACTGCGTGATTTGTGCTGGCTTATTTTCGAGAATAACACAACCAAAGAGGATT TAAATGTTTTCAGCAATTTCCTTTCTATGGATTTTGATCACACCAAAAAGAATAAGTTTAAGGAGAAAAAAGATAAGTTC AGACCTATTGAAACTTTCTTTAAGGGAGAAACAGATCTATCGAACATTGATGCTATAAATATGGCAGCGATTATGGTCGA TTTCCATCCGCGTCCTTTCAAAAAGTTTTACGAAAATTCTAAGACTGATGAAATAAAACCAGTTAAACGGATGGATAAAG CTAAAGCAGTCTTTGAGAAAAAGAGTACTGCAAAAAAAGAAAAGCATGAAAAAAAGTCTAAGAAAAGTTTCTTTCTAGAT TTTAAAAGCATGTTTTTCTAG
Upstream 100 bases:
>100_bases TCTGGTAAAGCAAGGGTGCTTTGAACTTTTGTGATATTGGATTTCCCGGAAAAACCTTTGATTTCCTGTGATTTCCAAGA ATTGCAAAAAAAAAAATACC
Downstream 100 bases:
>100_bases GGGTTTGCCACAAAGACGCTAAGACACAAAATTTTTATCCACAGATTATAAAGATTAAAAGGATTATAAAAAATCTGCCA GATCTGTGAGAAACTATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MQNNTLEKYKKAIRKKYDIEKEGRYFDYLYKPSRGKLRDLCWLIFENNTTKEDLNVFSNFLSMDFDHTKKNKFKEKKDKF RPIETFFKGETDLSNIDAINMAAIMVDFHPRPFKKFYENSKTDEIKPVKRMDKAKAVFEKKSTAKKEKHEKKSKKSFFLD FKSMFF
Sequences:
>Translated_166_residues MQNNTLEKYKKAIRKKYDIEKEGRYFDYLYKPSRGKLRDLCWLIFENNTTKEDLNVFSNFLSMDFDHTKKNKFKEKKDKF RPIETFFKGETDLSNIDAINMAAIMVDFHPRPFKKFYENSKTDEIKPVKRMDKAKAVFEKKSTAKKEKHEKKSKKSFFLD FKSMFF >Mature_166_residues MQNNTLEKYKKAIRKKYDIEKEGRYFDYLYKPSRGKLRDLCWLIFENNTTKEDLNVFSNFLSMDFDHTKKNKFKEKKDKF RPIETFFKGETDLSNIDAINMAAIMVDFHPRPFKKFYENSKTDEIKPVKRMDKAKAVFEKKSTAKKEKHEKKSKKSFFLD FKSMFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20096; Mature: 20096
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNNTLEKYKKAIRKKYDIEKEGRYFDYLYKPSRGKLRDLCWLIFENNTTKEDLNVFSNF CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHEECCCCCHHHHHHHHHH LSMDFDHTKKNKFKEKKDKFRPIETFFKGETDLSNIDAINMAAIMVDFHPRPFKKFYENS HHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHEEEECCCCHHHHHHCCC KTDEIKPVKRMDKAKAVFEKKSTAKKEKHEKKSKKSFFLDFKSMFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNNTLEKYKKAIRKKYDIEKEGRYFDYLYKPSRGKLRDLCWLIFENNTTKEDLNVFSNF CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHEECCCCCHHHHHHHHHH LSMDFDHTKKNKFKEKKDKFRPIETFFKGETDLSNIDAINMAAIMVDFHPRPFKKFYENS HHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHEEEECCCCHHHHHHCCC KTDEIKPVKRMDKAKAVFEKKSTAKKEKHEKKSKKSFFLDFKSMFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA