Click here to switch to the map view.

The map label for this gene is ypjG [H]

Identifier: 146302444

GI number: 146302444

Start: 5696578

End: 5697294

Strand: Reverse

Name: ypjG [H]

Synonym: Fjoh_4717

Alternate gene names: 146302444

Gene position: 5697294-5696578 (Counterclockwise)

Preceding gene: 146302445

Following gene: 146302435

Centisome position: 93.45

GC content: 37.1

Gene sequence:

>717_bases
ATGAAATTAGACATATTAGCCTTTGGCGCACATCCGGATGATGTAGAATTAGGTTGCGCCGGAACAATTTTAAAAGAAGT
TTCCCTTGGGAAAAAAGTAGGTATTGTAGATTTAACCCGCGGCGAACTAGGAACTCGAGGTACAGCAGAAATTAGAGACG
AGGAAGCAAAAGATGCCGCAAAGATTCTGGGAGTTCTTGTGCGCGAAAATCTGGCAATGCGTGATGGATTTTTCGTTAAT
GATGAAAAACATCAATTAGAGGTTATAAAAATGATTCGAAAATACAAACCTGAAATTGTATTATGCAACGCAATTGATGA
TCGTCATATTGATCATGGTAAAGGAAGCAGATTAGTTTCTGATGCTTGTTTCCTGTCTGGTTTAATGAAAATCGAAACTT
CAATCGACGGAGAGAACCAGGAAGCCTGGAGACCAAAAGTTGTATACCACTATATTCAGTGGAAAAATATTACTCCAGAC
TTTGTAGTTGATATTACTGGTTTTGAAGAAAAGAAAATTGAAGCGGTTATGGCATATAAAACCCAATTTTACGATCCGAA
TTCAAAAGAGCCTTCAACGCCAATTACAAGTAAAAACTTTTTTGAGAGTTTAAATTATCGTGCGCAGGACTTAGGAAGAC
TGGTTGGTAAAGATTTTGCAGAAGGATTTACAGTTGAAAGGTGTTTGGCAGTCAACAGCTTAGAAAATTTATTGTAA

Upstream 100 bases:

>100_bases
TTTACAGTCGCAGTCGCAGTTTGCAGATACTGAGACTAAAAACTGAGACTGAAAACTGAGACTGCGACTCAACCTGAAAC
AAAACAAACAAAAAACAAAA

Downstream 100 bases:

>100_bases
TTTTTTCATTTTTTTCTTTGTAGAACTCAACCTTTGTTATATATTTGCACTCGCTAAGCAAAAAAATGGTGGTTGTAGCT
CAGCTGGTTAGAGTAGCGGT

Product: LmbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKLDILAFGAHPDDVELGCAGTILKEVSLGKKVGIVDLTRGELGTRGTAEIRDEEAKDAAKILGVLVRENLAMRDGFFVN
DEKHQLEVIKMIRKYKPEIVLCNAIDDRHIDHGKGSRLVSDACFLSGLMKIETSIDGENQEAWRPKVVYHYIQWKNITPD
FVVDITGFEEKKIEAVMAYKTQFYDPNSKEPSTPITSKNFFESLNYRAQDLGRLVGKDFAEGFTVERCLAVNSLENLL

Sequences:

>Translated_238_residues
MKLDILAFGAHPDDVELGCAGTILKEVSLGKKVGIVDLTRGELGTRGTAEIRDEEAKDAAKILGVLVRENLAMRDGFFVN
DEKHQLEVIKMIRKYKPEIVLCNAIDDRHIDHGKGSRLVSDACFLSGLMKIETSIDGENQEAWRPKVVYHYIQWKNITPD
FVVDITGFEEKKIEAVMAYKTQFYDPNSKEPSTPITSKNFFESLNYRAQDLGRLVGKDFAEGFTVERCLAVNSLENLL
>Mature_238_residues
MKLDILAFGAHPDDVELGCAGTILKEVSLGKKVGIVDLTRGELGTRGTAEIRDEEAKDAAKILGVLVRENLAMRDGFFVN
DEKHQLEVIKMIRKYKPEIVLCNAIDDRHIDHGKGSRLVSDACFLSGLMKIETSIDGENQEAWRPKVVYHYIQWKNITPD
FVVDITGFEEKKIEAVMAYKTQFYDPNSKEPSTPITSKNFFESLNYRAQDLGRLVGKDFAEGFTVERCLAVNSLENLL

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 26770; Mature: 26770

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDILAFGAHPDDVELGCAGTILKEVSLGKKVGIVDLTRGELGTRGTAEIRDEEAKDAA
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHH
KILGVLVRENLAMRDGFFVNDEKHQLEVIKMIRKYKPEIVLCNAIDDRHIDHGKGSRLVS
HHHHHHHHHCHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
DACFLSGLMKIETSIDGENQEAWRPKVVYHYIQWKNITPDFVVDITGFEEKKIEAVMAYK
HHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHH
TQFYDPNSKEPSTPITSKNFFESLNYRAQDLGRLVGKDFAEGFTVERCLAVNSLENLL
HHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLDILAFGAHPDDVELGCAGTILKEVSLGKKVGIVDLTRGELGTRGTAEIRDEEAKDAA
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHH
KILGVLVRENLAMRDGFFVNDEKHQLEVIKMIRKYKPEIVLCNAIDDRHIDHGKGSRLVS
HHHHHHHHHCHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
DACFLSGLMKIETSIDGENQEAWRPKVVYHYIQWKNITPDFVVDITGFEEKKIEAVMAYK
HHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHH
TQFYDPNSKEPSTPITSKNFFESLNYRAQDLGRLVGKDFAEGFTVERCLAVNSLENLL
HHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]