Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is ybaL [C]

Identifier: 146302435

GI number: 146302435

Start: 5681913

End: 5684060

Strand: Reverse

Name: ybaL [C]

Synonym: Fjoh_4708

Alternate gene names: 146302435

Gene position: 5684060-5681913 (Counterclockwise)

Preceding gene: 146302444

Following gene: 146302434

Centisome position: 93.23

GC content: 34.5

Gene sequence:

>2148_bases
ATGATAGAATTTTTCAAGCATTTTTTACACGAATTCGAACTCCCTCTCAACAACCCGGTATTGATTTTTTCGTTAATACT
TTTCATTATTCTGCTGTCGCCCATTTTACTTAAAAAAATAAATATTCCCGGAATCATTGGTTTAATTATTTCTGGTGTTA
TCATAGGTCCTCATGGATTAAATATACTGGCAAAAAATTCTGCTGTAGATTTATTCTCGACAATTGGGCTTTTGTACATT
ATGTTTATTGCAGGTCTTGAATTGGATATGAACGAATTTAAAGCCAATAGAAACAAAAGTTTATTATTTGGTTTTTTTAC
ATTCATTTTACCGCTCTCAATAGGTTTTCCGGTTTGTTTTTACTTACTGAAATACGATTTTAACGCTAGTTTTTTAACAG
CAAGTATGTTTGCAACGCATACTTTGGTTGCGTACCCAATTGTGAGTAAACTTGGAATTGCAAAAAATCAGGCAGTAGCT
ATTACGGTTGGAGGAACAATTTTAACTGATACTGCCGTTTTGATTATTCTGGCCGTAATTATGGGAAGCGCTCAGGGAAG
TTTAAACCAGGCGTTTTGGATTAAGTTAGGTGTATCTCTGGCAATTTTCTCTGCCATTATGTTTTTGGTTATTCCAAGAA
TTGCTAAATGGTTTTTCAAGAAACTGGAAAGTGAAAAACACGCCCATTATATTTTTGTTCTCTCAGTCGTTTTCTTTGCG
GCATTTTTAGCCGAAGTAGCAGGAGTAGAGCCTATTATTGGAGCATTCGTTGCCGGTTTGGCATTAAATCCTTTAATTCC
GCATTCATCAGCTTTGATGAATAGAATTGAGTTTATTGGAAATGCTTTGTTTATTCCGTTTTTCCTGATTTCGGTTGGAA
TGCTGGTTGATATCAGTGTAATTTTAAGCGGGCCTACAGCTTTAATCGTTGCCGGAACGTTGAGTGTTGTGGCTATTTTT
GGGAAATGGATTGCAGCATTTTTTACACAGGTCGTTTTTAAATATACTAAAACCGAAAGACAGCTTATTTTTGGGTTGAG
CAGTGCGCACGCGGCCGCAACTCTGGCTGTAATTTTAGTAGGTTTTAAAGCCAAAATTCTAGATGAAAATATATTAAACG
GAACCATTATTTTAATTCTGATAACTTGTATTGTAGCTTCTTTTGCTACAGAAAAGGCGGCTAAAAAAATTGCAATCTGT
GAAGAAGAAGTTTCTCATGAAGATGCCGGTAAAAATCAAATTCTAGATGAACATATTTTGATTCCGCTGGCAAAAACTTC
GGCGACAGCCAGTTTATTAGATTTTGCACTTTTAATTAAAGATAAAAAATCATCAAATCCGGTTACGCTTTTAACGATTG
TACCCAATAACGATCAGGCCGAAAAGAACATTTTAAAATATAAAAAAGCAGTTGATAAATTCGTAATTCAGGCTTCTGCT
TCTGAAGTAAAAATTAACACAATTGCCAGAATCGATCATAATCCAGCAAGTGGAATCGCTAGGACTTCCAAAGAAATTAT
GTCGGATATTGTAATTGTGGGCTGGCCTAGAAAAACCGGTTTTATCGATAAAATCTTTGGAGAAAATGTAGATTCTATAA
TTAATAATGTAGATAAAAGTTTATTTATCTGCAGGTTCCAGAGAACTTTTATTGAAGAAAAAAGGCTGGTATTTATATGC
CCGCCATTTTCAGAAAGAGGAGTTGGTTTTCAGGTATTATTACAGAAAATTTCAAGATTATCTCAGGAATTAAGTATTCC
TATTGTAATTTATGCAGAATATAAAACGCATCAAACAATTCAGCAAATTGCAAATAATCTTCGATTGAATACTAAACTAG
GATTTAAGAGCGTTATAGAGTGGGACGATTTTGAATCTATTTCAGATGAAATCCGCCAAACAGATTTAATCGTTTTTAAT
TTATCCCGAAAAGGGTCAGTTTCCTATCATTCAATCTTTGACAGGCTGCCTCAGAAATTTGAAAAATTCTTCAACGATAA
TAATATTATACTAGTTTATCCTCACGACGATCGAAAAGAAAGTGCCATGGATGCTTATGAAGATTTTACGGCTACGCCGT
TAACTAAAAGTCTGGAAGCAATTGAGCAGATTGGTCGTGGTTTAGGAAGCATCTTAAAAAAAAGCTAG

Upstream 100 bases:

>100_bases
CAGACTTATCTGTTTGTGTTAACTTCAAGGATTTCGTTTTAATGCTGTAAATGTCTTTTTACGAAAAATTTAGAATACCA
CAAGAAGATAAAATTACATT

Downstream 100 bases:

>100_bases
TATAAATAATTATCAGCATTAATAAATGAGACTAAAGTTTCCGTTAATAGTATTAACATTTTTAAGCTTCGCAGCGAATG
CACAAAACAAAATGAAAAAA

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: MjNapA [H]

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MIEFFKHFLHEFELPLNNPVLIFSLILFIILLSPILLKKINIPGIIGLIISGVIIGPHGLNILAKNSAVDLFSTIGLLYI
MFIAGLELDMNEFKANRNKSLLFGFFTFILPLSIGFPVCFYLLKYDFNASFLTASMFATHTLVAYPIVSKLGIAKNQAVA
ITVGGTILTDTAVLIILAVIMGSAQGSLNQAFWIKLGVSLAIFSAIMFLVIPRIAKWFFKKLESEKHAHYIFVLSVVFFA
AFLAEVAGVEPIIGAFVAGLALNPLIPHSSALMNRIEFIGNALFIPFFLISVGMLVDISVILSGPTALIVAGTLSVVAIF
GKWIAAFFTQVVFKYTKTERQLIFGLSSAHAAATLAVILVGFKAKILDENILNGTIILILITCIVASFATEKAAKKIAIC
EEEVSHEDAGKNQILDEHILIPLAKTSATASLLDFALLIKDKKSSNPVTLLTIVPNNDQAEKNILKYKKAVDKFVIQASA
SEVKINTIARIDHNPASGIARTSKEIMSDIVIVGWPRKTGFIDKIFGENVDSIINNVDKSLFICRFQRTFIEEKRLVFIC
PPFSERGVGFQVLLQKISRLSQELSIPIVIYAEYKTHQTIQQIANNLRLNTKLGFKSVIEWDDFESISDEIRQTDLIVFN
LSRKGSVSYHSIFDRLPQKFEKFFNDNNIILVYPHDDRKESAMDAYEDFTATPLTKSLEAIEQIGRGLGSILKKS

Sequences:

>Translated_715_residues
MIEFFKHFLHEFELPLNNPVLIFSLILFIILLSPILLKKINIPGIIGLIISGVIIGPHGLNILAKNSAVDLFSTIGLLYI
MFIAGLELDMNEFKANRNKSLLFGFFTFILPLSIGFPVCFYLLKYDFNASFLTASMFATHTLVAYPIVSKLGIAKNQAVA
ITVGGTILTDTAVLIILAVIMGSAQGSLNQAFWIKLGVSLAIFSAIMFLVIPRIAKWFFKKLESEKHAHYIFVLSVVFFA
AFLAEVAGVEPIIGAFVAGLALNPLIPHSSALMNRIEFIGNALFIPFFLISVGMLVDISVILSGPTALIVAGTLSVVAIF
GKWIAAFFTQVVFKYTKTERQLIFGLSSAHAAATLAVILVGFKAKILDENILNGTIILILITCIVASFATEKAAKKIAIC
EEEVSHEDAGKNQILDEHILIPLAKTSATASLLDFALLIKDKKSSNPVTLLTIVPNNDQAEKNILKYKKAVDKFVIQASA
SEVKINTIARIDHNPASGIARTSKEIMSDIVIVGWPRKTGFIDKIFGENVDSIINNVDKSLFICRFQRTFIEEKRLVFIC
PPFSERGVGFQVLLQKISRLSQELSIPIVIYAEYKTHQTIQQIANNLRLNTKLGFKSVIEWDDFESISDEIRQTDLIVFN
LSRKGSVSYHSIFDRLPQKFEKFFNDNNIILVYPHDDRKESAMDAYEDFTATPLTKSLEAIEQIGRGLGSILKKS
>Mature_715_residues
MIEFFKHFLHEFELPLNNPVLIFSLILFIILLSPILLKKINIPGIIGLIISGVIIGPHGLNILAKNSAVDLFSTIGLLYI
MFIAGLELDMNEFKANRNKSLLFGFFTFILPLSIGFPVCFYLLKYDFNASFLTASMFATHTLVAYPIVSKLGIAKNQAVA
ITVGGTILTDTAVLIILAVIMGSAQGSLNQAFWIKLGVSLAIFSAIMFLVIPRIAKWFFKKLESEKHAHYIFVLSVVFFA
AFLAEVAGVEPIIGAFVAGLALNPLIPHSSALMNRIEFIGNALFIPFFLISVGMLVDISVILSGPTALIVAGTLSVVAIF
GKWIAAFFTQVVFKYTKTERQLIFGLSSAHAAATLAVILVGFKAKILDENILNGTIILILITCIVASFATEKAAKKIAIC
EEEVSHEDAGKNQILDEHILIPLAKTSATASLLDFALLIKDKKSSNPVTLLTIVPNNDQAEKNILKYKKAVDKFVIQASA
SEVKINTIARIDHNPASGIARTSKEIMSDIVIVGWPRKTGFIDKIFGENVDSIINNVDKSLFICRFQRTFIEEKRLVFIC
PPFSERGVGFQVLLQKISRLSQELSIPIVIYAEYKTHQTIQQIANNLRLNTKLGFKSVIEWDDFESISDEIRQTDLIVFN
LSRKGSVSYHSIFDRLPQKFEKFFNDNNIILVYPHDDRKESAMDAYEDFTATPLTKSLEAIEQIGRGLGSILKKS

Specific function: This is probably a Na(+)/H(+) antiporter [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322367, Length=417, Percent_Identity=25.6594724220624, Blast_Score=104, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153 [H]

Pfam domain/function: PF00999 Na_H_Exchanger [H]

EC number: NA

Molecular weight: Translated: 79164; Mature: 79164

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFFKHFLHEFELPLNNPVLIFSLILFIILLSPILLKKINIPGIIGLIISGVIIGPHGL
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCC
NILAKNSAVDLFSTIGLLYIMFIAGLELDMNEFKANRNKSLLFGFFTFILPLSIGFPVCF
EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YLLKYDFNASFLTASMFATHTLVAYPIVSKLGIAKNQAVAITVGGTILTDTAVLIILAVI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHH
MGSAQGSLNQAFWIKLGVSLAIFSAIMFLVIPRIAKWFFKKLESEKHAHYIFVLSVVFFA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AFLAEVAGVEPIIGAFVAGLALNPLIPHSSALMNRIEFIGNALFIPFFLISVGMLVDISV
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSGPTALIVAGTLSVVAIFGKWIAAFFTQVVFKYTKTERQLIFGLSSAHAAATLAVILV
HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
GFKAKILDENILNGTIILILITCIVASFATEKAAKKIAICEEEVSHEDAGKNQILDEHIL
HHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHE
IPLAKTSATASLLDFALLIKDKKSSNPVTLLTIVPNNDQAEKNILKYKKAVDKFVIQASA
EEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
SEVKINTIARIDHNPASGIARTSKEIMSDIVIVGWPRKTGFIDKIFGENVDSIINNVDKS
CCEEEEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCHHHHHHHCCHH
LFICRFQRTFIEEKRLVFICPPFSERGVGFQVLLQKISRLSQELSIPIVIYAEYKTHQTI
HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
QQIANNLRLNTKLGFKSVIEWDDFESISDEIRQTDLIVFNLSRKGSVSYHSIFDRLPQKF
HHHHHCCEECCCCCHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH
EKFFNDNNIILVYPHDDRKESAMDAYEDFTATPLTKSLEAIEQIGRGLGSILKKS
HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEFFKHFLHEFELPLNNPVLIFSLILFIILLSPILLKKINIPGIIGLIISGVIIGPHGL
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCC
NILAKNSAVDLFSTIGLLYIMFIAGLELDMNEFKANRNKSLLFGFFTFILPLSIGFPVCF
EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YLLKYDFNASFLTASMFATHTLVAYPIVSKLGIAKNQAVAITVGGTILTDTAVLIILAVI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHH
MGSAQGSLNQAFWIKLGVSLAIFSAIMFLVIPRIAKWFFKKLESEKHAHYIFVLSVVFFA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AFLAEVAGVEPIIGAFVAGLALNPLIPHSSALMNRIEFIGNALFIPFFLISVGMLVDISV
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSGPTALIVAGTLSVVAIFGKWIAAFFTQVVFKYTKTERQLIFGLSSAHAAATLAVILV
HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
GFKAKILDENILNGTIILILITCIVASFATEKAAKKIAICEEEVSHEDAGKNQILDEHIL
HHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHE
IPLAKTSATASLLDFALLIKDKKSSNPVTLLTIVPNNDQAEKNILKYKKAVDKFVIQASA
EEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
SEVKINTIARIDHNPASGIARTSKEIMSDIVIVGWPRKTGFIDKIFGENVDSIINNVDKS
CCEEEEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCHHHHHHHCCHH
LFICRFQRTFIEEKRLVFICPPFSERGVGFQVLLQKISRLSQELSIPIVIYAEYKTHQTI
HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
QQIANNLRLNTKLGFKSVIEWDDFESISDEIRQTDLIVFNLSRKGSVSYHSIFDRLPQKF
HHHHHCCEECCCCCHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH
EKFFNDNNIILVYPHDDRKESAMDAYEDFTATPLTKSLEAIEQIGRGLGSILKKS
HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]