| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302432
Identifier: 146302432
GI number: 146302432
Start: 5680037
End: 5680720
Strand: Direct
Name: 146302432
Synonym: Fjoh_4705
Alternate gene names: NA
Gene position: 5680037-5680720 (Clockwise)
Preceding gene: 146302431
Following gene: 146302436
Centisome position: 93.16
GC content: 31.43
Gene sequence:
>684_bases ATGAATTTAACTGAACATTATAATCAATTATATACAACTTCTTCAAAAAGTATTTTGACAGGAAAATATTCTATTGATAC TGAAATTAAAAACGAATCTGATTCCCGATTTGGCATTACTCTGCTCATTCGCCCAAGCGATGAAATCAAAGCAAATATCC AAGTCTTATTGAATGAACTAAAACAAGTTGAACCAGAACAGTATTATTATCCTGATTCTGATATTCATATTACCGTAATG TCGATTATTTCCTGTTCAGAAAATTTTAATTTAAACCATATTTCTCCAAACGATTATATTCAGCTTATCTGTAAAAGTCT GGTTGATGTAGATAAAGTTACAATTCAGTTTAAAGGAATTACCGCTTCGTCTTCTGCAATTATGATTCAGGGTTTTCCAA CTGATGAAACCTTAAATAATTTACGAAATAAACTACGCGAAGATTTTAAAAACTCTCAATTGCAGCAAAGCATCGACAGC CGATATAGAATATCTACTGCTCATGCCACAGTAATGCGTTTTCAGGAAAAACTTCTTGATCCAGAAAAATTAATACAAAC CGCAGAAAAATATCGTGATTACGATTTTGGGGAATTTAATGTAAAAAGCTTAGAATTGGTTTACAATGACTGGTACCAGC GTAAAAGCAATACAAAAGTTTTGGGCGAATTTTGTTTGAGATAA
Upstream 100 bases:
>100_bases GTTTCCTTTAAATCAGCCTATGCCTTATGATTTAATTACAAAAATTGTAAAATTTAGAGTTCAGGAAAATCTTCAAAAAG CAAAAAAGAAATAATCATAA
Downstream 100 bases:
>100_bases TTTATAATCGGGGTTCTTTTAATTCAATTAAATCTGCCCTTTATTTTTTAAACACTCCAAAATGCCATAAAACACCAGAA GGATCGTGCAGAAAACATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNLTEHYNQLYTTSSKSILTGKYSIDTEIKNESDSRFGITLLIRPSDEIKANIQVLLNELKQVEPEQYYYPDSDIHITVM SIISCSENFNLNHISPNDYIQLICKSLVDVDKVTIQFKGITASSSAIMIQGFPTDETLNNLRNKLREDFKNSQLQQSIDS RYRISTAHATVMRFQEKLLDPEKLIQTAEKYRDYDFGEFNVKSLELVYNDWYQRKSNTKVLGEFCLR
Sequences:
>Translated_227_residues MNLTEHYNQLYTTSSKSILTGKYSIDTEIKNESDSRFGITLLIRPSDEIKANIQVLLNELKQVEPEQYYYPDSDIHITVM SIISCSENFNLNHISPNDYIQLICKSLVDVDKVTIQFKGITASSSAIMIQGFPTDETLNNLRNKLREDFKNSQLQQSIDS RYRISTAHATVMRFQEKLLDPEKLIQTAEKYRDYDFGEFNVKSLELVYNDWYQRKSNTKVLGEFCLR >Mature_227_residues MNLTEHYNQLYTTSSKSILTGKYSIDTEIKNESDSRFGITLLIRPSDEIKANIQVLLNELKQVEPEQYYYPDSDIHITVM SIISCSENFNLNHISPNDYIQLICKSLVDVDKVTIQFKGITASSSAIMIQGFPTDETLNNLRNKLREDFKNSQLQQSIDS RYRISTAHATVMRFQEKLLDPEKLIQTAEKYRDYDFGEFNVKSLELVYNDWYQRKSNTKVLGEFCLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26407; Mature: 26407
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTEHYNQLYTTSSKSILTGKYSIDTEIKNESDSRFGITLLIRPSDEIKANIQVLLNEL CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHH KQVEPEQYYYPDSDIHITVMSIISCSENFNLNHISPNDYIQLICKSLVDVDKVTIQFKGI HHCCCCCEECCCCCCEEEHEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECE TASSSAIMIQGFPTDETLNNLRNKLREDFKNSQLQQSIDSRYRISTAHATVMRFQEKLLD ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCC PEKLIQTAEKYRDYDFGEFNVKSLELVYNDWYQRKSNTKVLGEFCLR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MNLTEHYNQLYTTSSKSILTGKYSIDTEIKNESDSRFGITLLIRPSDEIKANIQVLLNEL CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHH KQVEPEQYYYPDSDIHITVMSIISCSENFNLNHISPNDYIQLICKSLVDVDKVTIQFKGI HHCCCCCEECCCCCCEEEHEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECE TASSSAIMIQGFPTDETLNNLRNKLREDFKNSQLQQSIDSRYRISTAHATVMRFQEKLLD ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCC PEKLIQTAEKYRDYDFGEFNVKSLELVYNDWYQRKSNTKVLGEFCLR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA