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The map label for this gene is ykgB [H]

Identifier: 146302427

GI number: 146302427

Start: 5676665

End: 5677789

Strand: Direct

Name: ykgB [H]

Synonym: Fjoh_4700

Alternate gene names: 146302427

Gene position: 5676665-5677789 (Clockwise)

Preceding gene: 146302426

Following gene: 146302428

Centisome position: 93.11

GC content: 34.67

Gene sequence:

>1125_bases
ATGAAAACCAAAATAAACTTCTTACTGCTAATCTTTTTACTAACATTTAATGCTTTCTCGCAAAACACTTATGTCTTTTT
GGGATCGTATAACCGCGATAAAACTGCAGAAGCGATCCAGATATATCAATTGGATACATTAAATGGAAAACTTACGAAAG
TAACGGCTGCAAAAAACATTATAAATCCGTCTTATTTAACGATTTCTCCAAACGGAAAATATGTGTATGCCTGTACAGAT
ACTAAAACACCAAATGCAGGAAGCGTGAGCAGTTTTGAGTTTAATCCCGACAATAAAACACTGACATTTTTAAACAGCCA
GAGAAGCGGCGGAGAAAATCCGGTATATGTAAGCGTTCACAAAAGCGGTAAATGGCTGGCAAATGCAAATTATACAGAAG
GAAGCGTTTCGGTTTATCCTCTTTTAGAAAATGGAAAAATAGATTCAATTGCGCAGAACTTTCAATATACAGACGGAAGC
GTAAACAAAGACAGACAGACAAGATCTCACGTACATTCGGCAGTATTTTCTCCGCAATGCGATTATTTGTTTTTACCCGA
TTTAGGTGCAGATAAAATTCGTTGTTATGCCTTTGATGCTTCTCAGAAAAAACCTTTAATCGAAACCCAAAACCCGTTTA
CAAAAACAGATTTAGAAGCCGGACCAAGGCATTTTACTTTTCATCCTAATCAAAAATGGGGTTATTGTATTGAAGAAATG
GCTGGGCAGATAAGTGTGTATAATTATGATAATGGCGTTTTAAATAAAATACAGCGTATTGCTTCACATCCAGATAAAAT
AAAAGAAGGTTTTGAAAGTTCGGACATTCATATTTCTCCAGATGGAAAATTTCTGTATGCCACAAATCGTGGAAAAGAAA
ACAATATTGCTATTTTCTCTATTGACGAAAATGGACTGCTAAAAAACATTGGTTACCAGTCTACTTTAGGAAAACATCCT
AGAATTTTTGCAATAGACGAAAGCGGAAAATTTTTGGCTGCATCGAATGTGCTTACCGGAAATGTAATTGTTTTTAAAAG
AGATTTGAAAACCGGTTTATTGAAAAAAACAGGAAAACAGATTAAAATGGAGAATGTTTCATGCGTTCAGATCAAAAAGA
TTTAG

Upstream 100 bases:

>100_bases
CAATGGTGGAAAGGGGTTAATTAATTGTGAATTATGAATGGTTAATTATGAATTATAATTGGAACCTGAAAACCTGAAAC
TTGAAACCTGAAAACCAAAA

Downstream 100 bases:

>100_bases
AGCCCCTAAATGCATTAATCAGCAGACAAAAAACTAACAGAAAAACCAAAAATCATGATATCAAATTTCAATTTACAGCC
TGAAGTTTTAGAAAATGAAC

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKTKINFLLLIFLLTFNAFSQNTYVFLGSYNRDKTAEAIQIYQLDTLNGKLTKVTAAKNIINPSYLTISPNGKYVYACTD
TKTPNAGSVSSFEFNPDNKTLTFLNSQRSGGENPVYVSVHKSGKWLANANYTEGSVSVYPLLENGKIDSIAQNFQYTDGS
VNKDRQTRSHVHSAVFSPQCDYLFLPDLGADKIRCYAFDASQKKPLIETQNPFTKTDLEAGPRHFTFHPNQKWGYCIEEM
AGQISVYNYDNGVLNKIQRIASHPDKIKEGFESSDIHISPDGKFLYATNRGKENNIAIFSIDENGLLKNIGYQSTLGKHP
RIFAIDESGKFLAASNVLTGNVIVFKRDLKTGLLKKTGKQIKMENVSCVQIKKI

Sequences:

>Translated_374_residues
MKTKINFLLLIFLLTFNAFSQNTYVFLGSYNRDKTAEAIQIYQLDTLNGKLTKVTAAKNIINPSYLTISPNGKYVYACTD
TKTPNAGSVSSFEFNPDNKTLTFLNSQRSGGENPVYVSVHKSGKWLANANYTEGSVSVYPLLENGKIDSIAQNFQYTDGS
VNKDRQTRSHVHSAVFSPQCDYLFLPDLGADKIRCYAFDASQKKPLIETQNPFTKTDLEAGPRHFTFHPNQKWGYCIEEM
AGQISVYNYDNGVLNKIQRIASHPDKIKEGFESSDIHISPDGKFLYATNRGKENNIAIFSIDENGLLKNIGYQSTLGKHP
RIFAIDESGKFLAASNVLTGNVIVFKRDLKTGLLKKTGKQIKMENVSCVQIKKI
>Mature_374_residues
MKTKINFLLLIFLLTFNAFSQNTYVFLGSYNRDKTAEAIQIYQLDTLNGKLTKVTAAKNIINPSYLTISPNGKYVYACTD
TKTPNAGSVSSFEFNPDNKTLTFLNSQRSGGENPVYVSVHKSGKWLANANYTEGSVSVYPLLENGKIDSIAQNFQYTDGS
VNKDRQTRSHVHSAVFSPQCDYLFLPDLGADKIRCYAFDASQKKPLIETQNPFTKTDLEAGPRHFTFHPNQKWGYCIEEM
AGQISVYNYDNGVLNKIQRIASHPDKIKEGFESSDIHISPDGKFLYATNRGKENNIAIFSIDENGLLKNIGYQSTLGKHP
RIFAIDESGKFLAASNVLTGNVIVFKRDLKTGLLKKTGKQIKMENVSCVQIKKI

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=335, Percent_Identity=29.5522388059701, Blast_Score=134, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 41839; Mature: 41839

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKINFLLLIFLLTFNAFSQNTYVFLGSYNRDKTAEAIQIYQLDTLNGKLTKVTAAKNI
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEHHHC
INPSYLTISPNGKYVYACTDTKTPNAGSVSSFEFNPDNKTLTFLNSQRSGGENPVYVSVH
CCCCEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEE
KSGKWLANANYTEGSVSVYPLLENGKIDSIAQNFQYTDGSVNKDRQTRSHVHSAVFSPQC
CCCCEEECCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC
DYLFLPDLGADKIRCYAFDASQKKPLIETQNPFTKTDLEAGPRHFTFHPNQKWGYCIEEM
CEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHH
AGQISVYNYDNGVLNKIQRIASHPDKIKEGFESSDIHISPDGKFLYATNRGKENNIAIFS
CCEEEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCEEEEECCCCCCCEEEEE
IDENGLLKNIGYQSTLGKHPRIFAIDESGKFLAASNVLTGNVIVFKRDLKTGLLKKTGKQ
ECCCCCEECCCCHHHCCCCCEEEEECCCCCEEEECCEEECCEEEEECCCHHHHHHHCCCE
IKMENVSCVQIKKI
EEECCCEEEEEEEC
>Mature Secondary Structure
MKTKINFLLLIFLLTFNAFSQNTYVFLGSYNRDKTAEAIQIYQLDTLNGKLTKVTAAKNI
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEHHHC
INPSYLTISPNGKYVYACTDTKTPNAGSVSSFEFNPDNKTLTFLNSQRSGGENPVYVSVH
CCCCEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEE
KSGKWLANANYTEGSVSVYPLLENGKIDSIAQNFQYTDGSVNKDRQTRSHVHSAVFSPQC
CCCCEEECCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC
DYLFLPDLGADKIRCYAFDASQKKPLIETQNPFTKTDLEAGPRHFTFHPNQKWGYCIEEM
CEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHH
AGQISVYNYDNGVLNKIQRIASHPDKIKEGFESSDIHISPDGKFLYATNRGKENNIAIFS
CCEEEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCEEEEECCCCCCCEEEEE
IDENGLLKNIGYQSTLGKHPRIFAIDESGKFLAASNVLTGNVIVFKRDLKTGLLKKTGKQ
ECCCCCEECCCCHHHCCCCCEEEEECCCCCEEEECCEEECCEEEEECCCHHHHHHHCCCE
IKMENVSCVQIKKI
EEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]