| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302238
Identifier: 146302238
GI number: 146302238
Start: 5448386
End: 5451133
Strand: Direct
Name: 146302238
Synonym: Fjoh_4511
Alternate gene names: NA
Gene position: 5448386-5451133 (Clockwise)
Preceding gene: 146302237
Following gene: 146302239
Centisome position: 89.36
GC content: 33.22
Gene sequence:
>2748_bases ATGGAAGTGGCGGTTAATCTTGAACTCAAAACACTAAACGTAAAACAGGATATTACCTATTTAAATACTTCAAATGATAC TTTGGTTTCAATTGTTTTAAACGACTGGAACAATGCTTTTTCAGATAGAAATACACCTTTAGCAAAACGTTTTTCTGATG AATTTTATCGCGGTTTTCATTTGGCAAAAACTGTAGAAAAAGGAAACACCACAATTTTAAATCTGACCGATTCAAACTTT ACGGCTCTTGAATGGGAAAGAACAGAGAAAAATCCGGATTTTATCGTTATACGGCTGAATAAAAAACTTCTCCCTGGCGA ACAAATTGATCTGCATATTACCTACATTTCAAAAATTCCAAGTGATAAATTCACCCATTATGGATTTGACCAAAACGGGA TGAACTTAAAAAACTGGTTCCTGACCCCTGCCCGCTTTGAAAATCATGATTTTGTAAAATACAACAACTTTAATCTTGAT GATATTGCAAATGCCGAAGCTGATTATAAACTTGAAATAAAAGTACCAAACAATTACTCTATTATAACCGATTTAAATTC GGTTTCAAAAGACAGTACTAATGCTGCTTACAGCACCTATTCGTTTGCAGGAAGTAACAGAACTGATTTTAACCTGTTTA TTGAAAAACAAAACAATTTTAGAAGTTATAACAATGGGACAATTGAGGTTTTAACTGACTTGAAAAACAAGAAAATAACC GAGATTCAAAAAGCAATTGTAATTAATCGCGTCGCTGCGTTTGCAAATGAATTTATTGGAAAATATCCGCATAAAAAAAT CACGGTTTCGCAGGCAGATTATGAACGAAATCCTTTTTATGGACTAAATCAGCTTCCTTCTATAATTAGTCCGTTTTCAG ATGAGTTTATGTTTGAAATTACTTTTTTCAAAACCTATCTCAACAATTATCTAAAAAACTCCCTCCGCCTTGACCCACGA AAAGACAATTGGGTTTATGACGGAATCCAGATCTATGCCATGATGAAATACATGGAAGAATATCATCTGGATGAAAAAAT GCTGGGCAGACTCTCGAGAATGAAACTTTTTAAAAGTTACAATATCACCAATTTGACTTTTAACGAGCAATACAGCTATT ATTACATGCTTATGGCACGTAAAAATCTGGATCAGCCGCTTGGCGATCCAAAAAACACTTTAATAAAATTTAATGAGCAA ATTGCGAGCAAATACCGCGCTGGTTTAAGTTTAAGCTATTTAGATGATTACCTGAACCATAATATTGTTCCCGAAAGTGT TCAGGAATTTTATAATCTTAATAAATCACAGCAGACAAATCGTTATGATTTTGAAAAAATCTTAATTAAAAAAAGCCCTA AAAATCTCGATTGGTTTTTTAATACCATAATCGATTCCAGAGAAATAATAGATTATAAATTTACAAACGTATCGAGAACT GCCGACAGCGTTCAGTTTTCAATAAAAAGCAAAACTGACATTTATGCGCCTATTCCGGTTTACGGCCTTAAAAAAAATAA AATTGTTTTTAAAGAATGGATTGAACCGAAACAACCAGATTCTGTTTACCAGTTCAGCCGAAAAAATGCTGATAAATTAG TTATCAATTACGATAACGAAGTTCCAGAATTCAATCAAAGAAACAACTGGAAATCATTAAAAAGTCTGGCAATCACAAAT CGCCCAATCAAATTTAATTTTGCAAAAGATTTAGAAGATCCTTATTACAATCAGATTTTATATATACCAACCCTGACCTA TAATTACTACGATGGTTTTACGCCCGGAGTACGTTTTCATAATAAAACGATTTTAGATAAACCGTTTACGTTTGATATTA ATCCTGCTTATTCTTTAAAAGCCGGGACATTATCTGGTTCATCTGCTTTTGCTTGGAGTCAGTATTACCGAAACAGTACT TTATATAATGTAAGATATTCTCTAAGCCAGAACTATTTTCATTATGCACCGGATGCTACTTATTTGAGACTGAATCCTAT GGTGCAATTTCGAATTCGTGAGGAGAATTTTAGAGACAACAGGAAACAGCTTATTATGTTTCGTCAGGTAATTGTAAATC GTGAAGCCAGCGAATTTATTACAGACAATTCAAAACCAAATTATTCAATTTTTAATGCGCGGTATGCCAATACTAAAACA GAATTGGTCGATCATTTTAATTTTATGACCGATGTTCAGTTTTCAAGCGGTTTTGGAAAAGCCTCCGCTGAAGTAGAATA CAGAAGATTATTTGAAAACAACCGAAAGTTAAACCTGAGAGTATTTGCCGGAAGTTTTATTTACAACACAACAAATTCAG ATTATTTTAGTTTTGGTTTAGACAAGCCGACTGATTATTTGTTTGATTACAATATTCTGGGAAGATCAGAAACTACAGGT ATTTTCAGCCAGCAGTATGTAATTGCCGAAGGAGGTTTTAAATCTAAACTGAATCCTGCATTTGCAAACCAATGGATGGC GACTGTAAATGCCAGTTACGCACTATGGAACTGGATTGAGGTTTATGGCGATGCTGGTTTTTTAAAAAATAAACATCAAA AAGAGTACTTCGCTTACGACAGCGGCATACGCTTAAACCTTGTTCCTGATTATTTTGAGCTTTATTTTCCAGTTTACTCA AATAACGGATGGGAAATATCACAAAATAAATACAACGAAAAAATTAGATTTGTGATAACTTTTTCTCCTAAAACATTAGT CACTCTTTTCACTCGAAAATGGTTTTAA
Upstream 100 bases:
>100_bases ATAATTTTTAAGCCAATTCTTGAAATCATTCTATAAAATTATAATCATAATTTTTGCTTTATTGAATTCGATAAAGCAAT ATGCACAACATCAGTCTAAG
Downstream 100 bases:
>100_bases TTGAATAAATTTTAATCAAAAACATAAATAATTATCAGAAAAAGAACAAAAACAATGAAAATAACACAAATAAAATACAT AGTTTTTTGGTTTTAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Metalloprotease; Peptidase
Number of amino acids: Translated: 915; Mature: 915
Protein sequence:
>915_residues MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFHLAKTVEKGNTTILNLTDSNF TALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIPSDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLD DIANAEADYKLEIKVPNNYSIITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEITFFKTYLNNYLKNSLRLDPR KDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSYNITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQ IASKYRAGLSLSYLDDYLNHNIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNEVPEFNQRNNWKSLKSLAITN RPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFHNKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNST LYNVRYSLSQNYFHYAPDATYLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGLDKPTDYLFDYNILGRSETTG IFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIEVYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYS NNGWEISQNKYNEKIRFVITFSPKTLVTLFTRKWF
Sequences:
>Translated_915_residues MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFHLAKTVEKGNTTILNLTDSNF TALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIPSDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLD DIANAEADYKLEIKVPNNYSIITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEITFFKTYLNNYLKNSLRLDPR KDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSYNITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQ IASKYRAGLSLSYLDDYLNHNIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNEVPEFNQRNNWKSLKSLAITN RPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFHNKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNST LYNVRYSLSQNYFHYAPDATYLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGLDKPTDYLFDYNILGRSETTG IFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIEVYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYS NNGWEISQNKYNEKIRFVITFSPKTLVTLFTRKWF >Mature_915_residues MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFHLAKTVEKGNTTILNLTDSNF TALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIPSDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLD DIANAEADYKLEIKVPNNYSIITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEITFFKTYLNNYLKNSLRLDPR KDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSYNITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQ IASKYRAGLSLSYLDDYLNHNIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNEVPEFNQRNNWKSLKSLAITN RPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFHNKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNST LYNVRYSLSQNYFHYAPDATYLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGLDKPTDYLFDYNILGRSETTG IFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIEVYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYS NNGWEISQNKYNEKIRFVITFSPKTLVTLFTRKWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107800; Mature: 107800
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFH CEEEEEEEEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LAKTVEKGNTTILNLTDSNFTALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIP HHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCC SDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLDDIANAEADYKLEIKVPNNYS CCCCEECCCCCCCCCCHHEEECCCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEECCCCE IITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT EEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCHHH EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEH TFFKTYLNNYLKNSLRLDPRKDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSY HHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC NITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQIASKYRAGLSLSYLDDYLNH CEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHEEECHHHHHHHHCCCCHHHHHHHHCC NIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT CCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCC ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNE CCCEEEEEECCCCEEECCCCEECCCCCEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCC VPEFNQRNNWKSLKSLAITNRPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFH CCCCCCCCCHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEC NKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNSTLYNVRYSLSQNYFHYAPDAT CCEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCEEEECCCCE YLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT EEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCHH ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGL HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCEEEECC DKPTDYLFDYNILGRSETTGIFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIE CCCCCEEEEEEEECCCCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH VYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYSNNGWEISQNKYNEKIRFVIT HHCCCCHHCCCCCCCEEEECCCCEEEECCCCEEEEEEEECCCCEEECCCCCCCEEEEEEE FSPKTLVTLFTRKWF ECCCCEEHHHHHCCC >Mature Secondary Structure MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFH CEEEEEEEEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LAKTVEKGNTTILNLTDSNFTALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIP HHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCC SDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLDDIANAEADYKLEIKVPNNYS CCCCEECCCCCCCCCCHHEEECCCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEECCCCE IITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT EEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCHHH EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEH TFFKTYLNNYLKNSLRLDPRKDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSY HHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC NITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQIASKYRAGLSLSYLDDYLNH CEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHEEECHHHHHHHHCCCCHHHHHHHHCC NIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT CCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCC ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNE CCCEEEEEECCCCEEECCCCEECCCCCEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCC VPEFNQRNNWKSLKSLAITNRPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFH CCCCCCCCCHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEC NKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNSTLYNVRYSLSQNYFHYAPDAT CCEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCEEEECCCCE YLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT EEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCHH ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGL HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCEEEECC DKPTDYLFDYNILGRSETTGIFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIE CCCCCEEEEEEEECCCCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH VYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYSNNGWEISQNKYNEKIRFVIT HHCCCCHHCCCCCCCEEEECCCCEEEECCCCEEEEEEEECCCCEEECCCCCCCEEEEEEE FSPKTLVTLFTRKWF ECCCCEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA