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The map label for this gene is ygdH [C]

Identifier: 146302237

GI number: 146302237

Start: 5447357

End: 5448085

Strand: Direct

Name: ygdH [C]

Synonym: Fjoh_4510

Alternate gene names: 146302237

Gene position: 5447357-5448085 (Clockwise)

Preceding gene: 146302236

Following gene: 146302238

Centisome position: 89.35

GC content: 34.98

Gene sequence:

>729_bases
ATGAGATTAGAAGATTTTGATAATGATGAGGACAAAGTAATCCAGGACAGTTTAAAACAAAAAACCTGGAATGAAATTAG
AACCAATGACAGCTGGGCGATTTTTAAAATTATGTCTGAGTTTGTAAACGGTTACGAAAGCATGGGGCGTATTGGTCCTT
GTGTATCTATTTTTGGATCTGCGAGAACAAAACCAGACGACAAATATTATTTATTGGCAGAAAAAATTGCTTATAAAATC
AGTAAAGCCGGTTATGGCGTAATTACGGGAGGAGGCCCGGGAATTATGGAAGCTGGAAATAAAGGTGCACATATGGGAGG
CGGAACGTCTGTTGGTTTAAACATCGAACTGCCTTTTGAGCAGCACTTTAACCCTTATATTGATCACGATAAAAACCTGA
ATTTCGATTATTTCTTTGTGAGAAAAGTAATGTTCGTAAAGTATTCACAAGGTTTTGTGGTTATGCCGGGAGGTTTTGGA
ACATTAGACGAAATGTTCGAAGCTATCACTTTAATTCAAACCAAAAAAATTGGAAAATTCCCAATTATATTAGTTGGTGT
AGAATTTTGGTCTGGTTTAATCGAATGGGTAAAAACAGTTTTGGTAGAAAAAATGCATACTGTAAGCTCGGAAGATTTAA
ACTTATTCAAGATTGTAGATACTGAAGATGAAGTAGTTGATGTTTTAGATAAATTCTACAAGAAATACGATTTGAGTCCG
AATTTCTAA

Upstream 100 bases:

>100_bases
TCTAAATTGGAAATATAGTAAACAGCAGGACTAAGCTCCTTCTTTAACTATTATAATAATGACAGCTTAAATAAAAATAT
AAATAATTAAAATACCTAAA

Downstream 100 bases:

>100_bases
AATATCTTTTTAATCTTACAAAGATAAATATATTCTGTAAGTTTAAGTATTCTTAAAAAAATCTGCACTTCTTAACCCTA
CAAGGTTAAATTTGCACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRLEDFDNDEDKVIQDSLKQKTWNEIRTNDSWAIFKIMSEFVNGYESMGRIGPCVSIFGSARTKPDDKYYLLAEKIAYKI
SKAGYGVITGGGPGIMEAGNKGAHMGGGTSVGLNIELPFEQHFNPYIDHDKNLNFDYFFVRKVMFVKYSQGFVVMPGGFG
TLDEMFEAITLIQTKKIGKFPIILVGVEFWSGLIEWVKTVLVEKMHTVSSEDLNLFKIVDTEDEVVDVLDKFYKKYDLSP
NF

Sequences:

>Translated_242_residues
MRLEDFDNDEDKVIQDSLKQKTWNEIRTNDSWAIFKIMSEFVNGYESMGRIGPCVSIFGSARTKPDDKYYLLAEKIAYKI
SKAGYGVITGGGPGIMEAGNKGAHMGGGTSVGLNIELPFEQHFNPYIDHDKNLNFDYFFVRKVMFVKYSQGFVVMPGGFG
TLDEMFEAITLIQTKKIGKFPIILVGVEFWSGLIEWVKTVLVEKMHTVSSEDLNLFKIVDTEDEVVDVLDKFYKKYDLSP
NF
>Mature_242_residues
MRLEDFDNDEDKVIQDSLKQKTWNEIRTNDSWAIFKIMSEFVNGYESMGRIGPCVSIFGSARTKPDDKYYLLAEKIAYKI
SKAGYGVITGGGPGIMEAGNKGAHMGGGTSVGLNIELPFEQHFNPYIDHDKNLNFDYFFVRKVMFVKYSQGFVVMPGGFG
TLDEMFEAITLIQTKKIGKFPIILVGVEFWSGLIEWVKTVLVEKMHTVSSEDLNLFKIVDTEDEVVDVLDKFYKKYDLSP
NF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27485; Mature: 27485

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEDFDNDEDKVIQDSLKQKTWNEIRTNDSWAIFKIMSEFVNGYESMGRIGPCVSIFGS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ARTKPDDKYYLLAEKIAYKISKAGYGVITGGGPGIMEAGNKGAHMGGGTSVGLNIELPFE
CCCCCCCCEEHHHHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCCCCEEEEEEECCHH
QHFNPYIDHDKNLNFDYFFVRKVMFVKYSQGFVVMPGGFGTLDEMFEAITLIQTKKIGKF
HCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PIILVGVEFWSGLIEWVKTVLVEKMHTVSSEDLNLFKIVDTEDEVVDVLDKFYKKYDLSP
CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
NF
CC
>Mature Secondary Structure
MRLEDFDNDEDKVIQDSLKQKTWNEIRTNDSWAIFKIMSEFVNGYESMGRIGPCVSIFGS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ARTKPDDKYYLLAEKIAYKISKAGYGVITGGGPGIMEAGNKGAHMGGGTSVGLNIELPFE
CCCCCCCCEEHHHHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCCCCEEEEEEECCHH
QHFNPYIDHDKNLNFDYFFVRKVMFVKYSQGFVVMPGGFGTLDEMFEAITLIQTKKIGKF
HCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PIILVGVEFWSGLIEWVKTVLVEKMHTVSSEDLNLFKIVDTEDEVVDVLDKFYKKYDLSP
CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
NF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA