Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302235

Identifier: 146302235

GI number: 146302235

Start: 5442752

End: 5443705

Strand: Direct

Name: 146302235

Synonym: Fjoh_4508

Alternate gene names: NA

Gene position: 5442752-5443705 (Clockwise)

Preceding gene: 146302234

Following gene: 146302236

Centisome position: 89.27

GC content: 34.38

Gene sequence:

>954_bases
ATGTGGAATATTGACTTAACATACCGAGACGAATTTCAATCAACTTTTGATCGATTGTACCAAAAAAGACAGGAACTGCA
AACCAGCAGACCACTGCCTAATATTGCTTTACATAAAATCCGCGAAAGTTTATCTCTCGAATGGACTTACAATTCAAATA
GTATTGAAGGAAATACAATGAGCTTACGTGAAACCCAAATGGTTATCCAGGAAGGAATTACCATAAAAGGGAAATCACTT
CGAGAGCATTTTGAAACCCATAATCACGACAAAGCAATTGACTATTTATATTCAATTGTTGATGATAATTACAAACTTAG
AAGTATTGATATTCTTACTATTCATGGTTTAGTTTTACGTTCCATTGAAGATGATTTTGCTGGCCGCATTAGAAACGGAG
GTGTTCGTATTTCAGGAGCGAATTTTATGCCTCCAAATGCTAATAAAGTTTCAGATTATCTAGATGAATTAATTGACTTT
ATCAATACAAATCCATTAGGTTTAAATGATATTGAGCTGTCAACAATTTACCATCATAAATTAGTCTGGATTCATCCTTT
TTTTGATGGAAACGGCCGTACAGTTCGTTTAAGTATGAATTTATTATTAATGCGTTGTGGTTTTCCTCCGGCTATTATTT
TAAAAAACGATAGAAAAAAGTATTACGAAGCATTAAATCAAGCCAATAATGGCAATTACCAAAAACTAACGCTTTTGATG
TGTCAGGCACTTGAGCGTACACTCAATATTTATTTAAATGCAATGCCCGGAAGCACTTACGATTATCAGCCTATACAAAA
TATCGTAAGCGAGCCAGAATCACCATATGGTCAGGAATATGTTAGTTTATTGGCCAGAACAGGAAAAATAGATGCTTATA
AAGAAGGCCGAAACTGGTACACAACCAAAGAAGCCATTGAAGAATATATGGCCACAAGAAAAAGAAAACGCTAG

Upstream 100 bases:

>100_bases
CTACAGAATGAAACTGCGTTCTATGACAATAGAATAAGCTTAATATCGGATAAGTTAAAAATTTGCTATAACCGATATTA
TGAAGTAAATTTGTAGGATT

Downstream 100 bases:

>100_bases
TTCTAAACTAGCGTTAATTTGTTATTAATTGTAACATAAACTTTTGCATTCGAGTACAAAAAGAACAAATCAAAGTGGTA
ACTTTGCGTTTTGCTCATTT

Product: filamentation induced by cAMP protein Fic

Products: NA

Alternate protein names: Fic Family Protein; Fic Protein; FIC Domain-Containing Protein; Filamentation Induced By CAMP Protein Fic-Like Protein; Fic Protein Family; Filamentation Induced By Camp Family Protein; Fic Family Protein xin-Antitoxin System; Helix-Turn-Helix Domain-Containing Protein; Fic-Domain-Containing Protein; Fic Protein Involved In; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Fic/DOC Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MWNIDLTYRDEFQSTFDRLYQKRQELQTSRPLPNIALHKIRESLSLEWTYNSNSIEGNTMSLRETQMVIQEGITIKGKSL
REHFETHNHDKAIDYLYSIVDDNYKLRSIDILTIHGLVLRSIEDDFAGRIRNGGVRISGANFMPPNANKVSDYLDELIDF
INTNPLGLNDIELSTIYHHKLVWIHPFFDGNGRTVRLSMNLLLMRCGFPPAIILKNDRKKYYEALNQANNGNYQKLTLLM
CQALERTLNIYLNAMPGSTYDYQPIQNIVSEPESPYGQEYVSLLARTGKIDAYKEGRNWYTTKEAIEEYMATRKRKR

Sequences:

>Translated_317_residues
MWNIDLTYRDEFQSTFDRLYQKRQELQTSRPLPNIALHKIRESLSLEWTYNSNSIEGNTMSLRETQMVIQEGITIKGKSL
REHFETHNHDKAIDYLYSIVDDNYKLRSIDILTIHGLVLRSIEDDFAGRIRNGGVRISGANFMPPNANKVSDYLDELIDF
INTNPLGLNDIELSTIYHHKLVWIHPFFDGNGRTVRLSMNLLLMRCGFPPAIILKNDRKKYYEALNQANNGNYQKLTLLM
CQALERTLNIYLNAMPGSTYDYQPIQNIVSEPESPYGQEYVSLLARTGKIDAYKEGRNWYTTKEAIEEYMATRKRKR
>Mature_317_residues
MWNIDLTYRDEFQSTFDRLYQKRQELQTSRPLPNIALHKIRESLSLEWTYNSNSIEGNTMSLRETQMVIQEGITIKGKSL
REHFETHNHDKAIDYLYSIVDDNYKLRSIDILTIHGLVLRSIEDDFAGRIRNGGVRISGANFMPPNANKVSDYLDELIDF
INTNPLGLNDIELSTIYHHKLVWIHPFFDGNGRTVRLSMNLLLMRCGFPPAIILKNDRKKYYEALNQANNGNYQKLTLLM
CQALERTLNIYLNAMPGSTYDYQPIQNIVSEPESPYGQEYVSLLARTGKIDAYKEGRNWYTTKEAIEEYMATRKRKR

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42794620, Length=228, Percent_Identity=34.6491228070175, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17544594, Length=227, Percent_Identity=37.0044052863436, Blast_Score=146, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24582217, Length=222, Percent_Identity=35.1351351351351, Blast_Score=138, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36962; Mature: 36962

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNIDLTYRDEFQSTFDRLYQKRQELQTSRPLPNIALHKIRESLSLEWTYNSNSIEGNTM
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCCEE
SLRETQMVIQEGITIKGKSLREHFETHNHDKAIDYLYSIVDDNYKLRSIDILTIHGLVLR
HHHHHHHHHHCCCCEECHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHH
SIEDDFAGRIRNGGVRISGANFMPPNANKVSDYLDELIDFINTNPLGLNDIELSTIYHHK
HHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
LVWIHPFFDGNGRTVRLSMNLLLMRCGFPPAIILKNDRKKYYEALNQANNGNYQKLTLLM
EEEEEEEECCCCCEEEEEEEEHEEECCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHH
CQALERTLNIYLNAMPGSTYDYQPIQNIVSEPESPYGQEYVSLLARTGKIDAYKEGRNWY
HHHHHHHHHEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCC
TTKEAIEEYMATRKRKR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWNIDLTYRDEFQSTFDRLYQKRQELQTSRPLPNIALHKIRESLSLEWTYNSNSIEGNTM
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCCEE
SLRETQMVIQEGITIKGKSLREHFETHNHDKAIDYLYSIVDDNYKLRSIDILTIHGLVLR
HHHHHHHHHHCCCCEECHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHH
SIEDDFAGRIRNGGVRISGANFMPPNANKVSDYLDELIDFINTNPLGLNDIELSTIYHHK
HHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
LVWIHPFFDGNGRTVRLSMNLLLMRCGFPPAIILKNDRKKYYEALNQANNGNYQKLTLLM
EEEEEEEECCCCCEEEEEEEEHEEECCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHH
CQALERTLNIYLNAMPGSTYDYQPIQNIVSEPESPYGQEYVSLLARTGKIDAYKEGRNWY
HHHHHHHHHEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCC
TTKEAIEEYMATRKRKR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA