Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302216

Identifier: 146302216

GI number: 146302216

Start: 5412279

End: 5412875

Strand: Direct

Name: 146302216

Synonym: Fjoh_4488

Alternate gene names: NA

Gene position: 5412279-5412875 (Clockwise)

Preceding gene: 146302215

Following gene: 146302219

Centisome position: 88.77

GC content: 35.18

Gene sequence:

>597_bases
ATGTTTCCTAACCAATCCAAAGCACTTTTGTTTCTCCTTGTTATACTTACAATTGGGGACCAAAATGTCTGGGCCTCTGT
TAAAAATGGAAAACAAGTTGAAACCGCAGAAAAAAACCTGCCGGTTCAAAAGCATAATACAAATCAAGAACCGCCTTACA
GCGAACAGCAAGTTAAAAAAGCTGAGAGACTGCTAAACAGTTTACCTGAAAACGTAGATAAAATCAAGATTTTATTAAAA
GTATGCGACTGGTATGAAGCTTCTTATAACAATCCTAAAACATTAGAAAAGGCTTTTCAATATGCCGAAGATGCCCTTAG
GATAAGCCAGGCAATTCATTCAAACATTTATTCCGGTAAATGTTATCTACAGCTTTCAATGATACATGAATTGAGAAACC
ACAATTCGATGATAGAAGTTACAGCCAGAAAAGCAATAGCAGTATTAACCCAAACAAATGATTTAGATGATTTAGCAGAA
TCCTGGGTTATGGTCTGGTCATCAAAAATGAGAACCAATGCACCTATAAAAGAAAGATTAGAACCCATTTTTAAAGCTGC
TGCTCTATTTGAAACAACAGGAAATTGTTTTGATTGA

Upstream 100 bases:

>100_bases
CAACGAAATATCGTTGGCAGTCAATTTTCTGAAATTTTAGACTTACATACGTAATTATCAATACCTTCGTATAACCAAAG
CCAGTTTAATCATACGAAAG

Downstream 100 bases:

>100_bases
AGGCAAAAACTTTTCTTCAGATCAATTTTTTAATCAGGTTAAGGCTGAATTTGACCAGCTTTATGCAGAAAGTGAATTTA
AGCGAAGACAGCTTTCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKKAERLLNSLPENVDKIKILLK
VCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGKCYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAE
SWVMVWSSKMRTNAPIKERLEPIFKAAALFETTGNCFD

Sequences:

>Translated_198_residues
MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKKAERLLNSLPENVDKIKILLK
VCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGKCYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAE
SWVMVWSSKMRTNAPIKERLEPIFKAAALFETTGNCFD
>Mature_198_residues
MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKKAERLLNSLPENVDKIKILLK
VCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGKCYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAE
SWVMVWSSKMRTNAPIKERLEPIFKAAALFETTGNCFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22628; Mature: 22628

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKK
CCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH
AERLLNSLPENVDKIKILLKVCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGK
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
CYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAESWVMVWSSKMRTNAPIKERL
HEEHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
EPIFKAAALFETTGNCFD
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKK
CCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH
AERLLNSLPENVDKIKILLKVCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGK
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
CYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAESWVMVWSSKMRTNAPIKERL
HEEHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
EPIFKAAALFETTGNCFD
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA