| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302216
Identifier: 146302216
GI number: 146302216
Start: 5412279
End: 5412875
Strand: Direct
Name: 146302216
Synonym: Fjoh_4488
Alternate gene names: NA
Gene position: 5412279-5412875 (Clockwise)
Preceding gene: 146302215
Following gene: 146302219
Centisome position: 88.77
GC content: 35.18
Gene sequence:
>597_bases ATGTTTCCTAACCAATCCAAAGCACTTTTGTTTCTCCTTGTTATACTTACAATTGGGGACCAAAATGTCTGGGCCTCTGT TAAAAATGGAAAACAAGTTGAAACCGCAGAAAAAAACCTGCCGGTTCAAAAGCATAATACAAATCAAGAACCGCCTTACA GCGAACAGCAAGTTAAAAAAGCTGAGAGACTGCTAAACAGTTTACCTGAAAACGTAGATAAAATCAAGATTTTATTAAAA GTATGCGACTGGTATGAAGCTTCTTATAACAATCCTAAAACATTAGAAAAGGCTTTTCAATATGCCGAAGATGCCCTTAG GATAAGCCAGGCAATTCATTCAAACATTTATTCCGGTAAATGTTATCTACAGCTTTCAATGATACATGAATTGAGAAACC ACAATTCGATGATAGAAGTTACAGCCAGAAAAGCAATAGCAGTATTAACCCAAACAAATGATTTAGATGATTTAGCAGAA TCCTGGGTTATGGTCTGGTCATCAAAAATGAGAACCAATGCACCTATAAAAGAAAGATTAGAACCCATTTTTAAAGCTGC TGCTCTATTTGAAACAACAGGAAATTGTTTTGATTGA
Upstream 100 bases:
>100_bases CAACGAAATATCGTTGGCAGTCAATTTTCTGAAATTTTAGACTTACATACGTAATTATCAATACCTTCGTATAACCAAAG CCAGTTTAATCATACGAAAG
Downstream 100 bases:
>100_bases AGGCAAAAACTTTTCTTCAGATCAATTTTTTAATCAGGTTAAGGCTGAATTTGACCAGCTTTATGCAGAAAGTGAATTTA AGCGAAGACAGCTTTCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKKAERLLNSLPENVDKIKILLK VCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGKCYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAE SWVMVWSSKMRTNAPIKERLEPIFKAAALFETTGNCFD
Sequences:
>Translated_198_residues MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKKAERLLNSLPENVDKIKILLK VCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGKCYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAE SWVMVWSSKMRTNAPIKERLEPIFKAAALFETTGNCFD >Mature_198_residues MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKKAERLLNSLPENVDKIKILLK VCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGKCYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAE SWVMVWSSKMRTNAPIKERLEPIFKAAALFETTGNCFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22628; Mature: 22628
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKK CCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH AERLLNSLPENVDKIKILLKVCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGK HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH CYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAESWVMVWSSKMRTNAPIKERL HEEHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH EPIFKAAALFETTGNCFD HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFPNQSKALLFLLVILTIGDQNVWASVKNGKQVETAEKNLPVQKHNTNQEPPYSEQQVKK CCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH AERLLNSLPENVDKIKILLKVCDWYEASYNNPKTLEKAFQYAEDALRISQAIHSNIYSGK HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH CYLQLSMIHELRNHNSMIEVTARKAIAVLTQTNDLDDLAESWVMVWSSKMRTNAPIKERL HEEHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH EPIFKAAALFETTGNCFD HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA