| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is nfnB [C]
Identifier: 146302215
GI number: 146302215
Start: 5411257
End: 5411889
Strand: Direct
Name: nfnB [C]
Synonym: Fjoh_4487
Alternate gene names: 146302215
Gene position: 5411257-5411889 (Clockwise)
Preceding gene: 146302214
Following gene: 146302216
Centisome position: 88.75
GC content: 36.81
Gene sequence:
>633_bases ATGAAATTACTAGATGCTCTAAAATGGCGCTATGCAGCCAAAAAAATGAACGGACAAGTTGTACCGCAGGAAAAAATCGA TTATATACTAGAAGCTGCAAGATTAGCTCCTTCTTCATCTGGTTTACAGCCATATAAAATTTTTGTAATTACGAATAAGG AATTACAGGAAAAAATAAAAACTGTAGGTTTTGAACAAAGCCAAATTGTGGATGCTTCTCACGTATTGGTTTTTGCGGCA TGGGATGGATACTCTTTAGAAAAAATATCAGAAGTTTTTGAAAGAACAACGGCTGAAAGAGGAATTCCGGCAAGTGCTAT GGATGAATATAAAGAAAGACTTTGGGGAATGTATAAAGATCTTGGTCAGGAATGGCATGCCAATCATGCAGCAAAACAAG CGTACATTTCGTTTGGTTTAGCTATTGCTGCAGCTGCAGAACAAGAGGTTGATGCTACACCAATGGAAGGTTTTATCCCA GCCGAGGTAGATAAATTATTAGGTTTAAACGAGCTTGGTCTTAAAAGTGTATTAGTACTGCCTTTGGGTTACAGAGATGC TTCTAACGATTGGTTAGTGAACCTAAAAAAAGTAAGAACTCCGCAAAGCGAATTCATTACTGAAATAAAATAA
Upstream 100 bases:
>100_bases GGATAAGATTATCTTTATATTAACATTAGATTTTCTCTTGAGATTATAAAAATATATTTAAAGTCTTTACTTTTGAATAG AATTAAAATTGATACAGAAA
Downstream 100 bases:
>100_bases TTTCATTTCAAACATACCATAAACCAATAATTGAATCACTGCCGCATGAACGGTATATCTTTTTTGGCTTGAAATGTGGA TTTACCCATTTCAGCTTATT
Product: nitroreductase
Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKLLDALKWRYAAKKMNGQVVPQEKIDYILEAARLAPSSSGLQPYKIFVITNKELQEKIKTVGFEQSQIVDASHVLVFAA WDGYSLEKISEVFERTTAERGIPASAMDEYKERLWGMYKDLGQEWHANHAAKQAYISFGLAIAAAAEQEVDATPMEGFIP AEVDKLLGLNELGLKSVLVLPLGYRDASNDWLVNLKKVRTPQSEFITEIK
Sequences:
>Translated_210_residues MKLLDALKWRYAAKKMNGQVVPQEKIDYILEAARLAPSSSGLQPYKIFVITNKELQEKIKTVGFEQSQIVDASHVLVFAA WDGYSLEKISEVFERTTAERGIPASAMDEYKERLWGMYKDLGQEWHANHAAKQAYISFGLAIAAAAEQEVDATPMEGFIP AEVDKLLGLNELGLKSVLVLPLGYRDASNDWLVNLKKVRTPQSEFITEIK >Mature_210_residues MKLLDALKWRYAAKKMNGQVVPQEKIDYILEAARLAPSSSGLQPYKIFVITNKELQEKIKTVGFEQSQIVDASHVLVFAA WDGYSLEKISEVFERTTAERGIPASAMDEYKERLWGMYKDLGQEWHANHAAKQAYISFGLAIAAAAEQEVDATPMEGFIP AEVDKLLGLNELGLKSVLVLPLGYRDASNDWLVNLKKVRTPQSEFITEIK
Specific function: Reduction Of A Variety Of Nitroaromatic Compounds Using NADH (And To Lesser Extent Nadph) As Source Of Reducing Equivalents; Two Electrons Are Transferred. Capable Of Reducing Nitrofurazone, Quinones And The Anti-Tumor Agent Cb1954 (5- (Aziridin-1-Yl)-2,4
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
Organism=Escherichia coli, GI1786792, Length=220, Percent_Identity=29.5454545454545, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 23591; Mature: 23591
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLDALKWRYAAKKMNGQVVPQEKIDYILEAARLAPSSSGLQPYKIFVITNKELQEKIK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHH TVGFEQSQIVDASHVLVFAAWDGYSLEKISEVFERTTAERGIPASAMDEYKERLWGMYKD HCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LGQEWHANHAAKQAYISFGLAIAAAAEQEVDATPMEGFIPAEVDKLLGLNELGLKSVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHCCCEEEEE PLGYRDASNDWLVNLKKVRTPQSEFITEIK ECCCCCCCCCCEEEHHHHCCCHHHHHHCCC >Mature Secondary Structure MKLLDALKWRYAAKKMNGQVVPQEKIDYILEAARLAPSSSGLQPYKIFVITNKELQEKIK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHH TVGFEQSQIVDASHVLVFAAWDGYSLEKISEVFERTTAERGIPASAMDEYKERLWGMYKD HCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LGQEWHANHAAKQAYISFGLAIAAAAEQEVDATPMEGFIPAEVDKLLGLNELGLKSVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHCCCEEEEE PLGYRDASNDWLVNLKKVRTPQSEFITEIK ECCCCCCCCCCEEEHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H; 6,7-Dihydropteridine [C]
Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA