| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302214
Identifier: 146302214
GI number: 146302214
Start: 5410576
End: 5411112
Strand: Direct
Name: 146302214
Synonym: Fjoh_4486
Alternate gene names: NA
Gene position: 5410576-5411112 (Clockwise)
Preceding gene: 146302209
Following gene: 146302215
Centisome position: 88.74
GC content: 32.22
Gene sequence:
>537_bases ATGTATCACTTAATAATAATTAGAATGAAAAAAATAACCGTTATTACAGCATTAACTATTGTTCTCTTTGTTACATATTC TGCAAATGCTCAGAAAAATTCACAGCAGCTTGTTGAAGACTTCCAAAAATTGTCTGGCAGCTGGAACGGAAGCTTGACTT ACTTAGATTATTCTTCCGGAAAACCCTATACAATGTCAGCAGATGTTGAAGTTAAAAGAATCAATAATTCTAATGAATTT GAGTTCATTAATACTTACCCTAAAGAAAAAAGTGCCAACTCAACCCAAATTATTAGTATTTCACAAGATGGAAAATACAT TGGTAAAGAAGAGGTAATCTCAAGAATGGAACTCGTCGATGGTCAAATACAAATTGTTACTCAAAAACAAGGAAAAGACG GTAATGATAATAAGGAAGCCGTAATCAAGCAAACTTATACAATCAGCAAGACTGCATTTTCTATACGCAAAGACGTTTTA TTTTCTGGAGATACTAAATGGATAAAGAGACACGAATATGCCTATTCAAGAAACTAA
Upstream 100 bases:
>100_bases CAATTATTAAACTATTACGTGTTAAAAAAAAATACTAAAAAACTTACATAAAGTCAATTTTATTTCTTTTTCTTCTCTTT AATTTTGATACTATCAAGTA
Downstream 100 bases:
>100_bases AACTGCCTTCACCTAAGGCTGCTCCTATTTAAAGATTGTCAGCTGGATAAGATTATCTTTATATTAACATTAGATTTTCT CTTGAGATTATAAAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSGKPYTMSADVEVKRINNSNEF EFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVDGQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVL FSGDTKWIKRHEYAYSRN
Sequences:
>Translated_178_residues MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSGKPYTMSADVEVKRINNSNEF EFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVDGQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVL FSGDTKWIKRHEYAYSRN >Mature_178_residues MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSGKPYTMSADVEVKRINNSNEF EFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVDGQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVL FSGDTKWIKRHEYAYSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20357; Mature: 20357
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSG CEEEEEEEEHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC KPYTMSADVEVKRINNSNEFEFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVD CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC GQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVLFSGDTKWIKRHEYAYSRN CEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHHHHHHHEEECCCHHHHHHHCCCCCCC >Mature Secondary Structure MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSG CEEEEEEEEHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC KPYTMSADVEVKRINNSNEFEFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVD CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC GQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVLFSGDTKWIKRHEYAYSRN CEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHHHHHHHEEECCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA