Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302214

Identifier: 146302214

GI number: 146302214

Start: 5410576

End: 5411112

Strand: Direct

Name: 146302214

Synonym: Fjoh_4486

Alternate gene names: NA

Gene position: 5410576-5411112 (Clockwise)

Preceding gene: 146302209

Following gene: 146302215

Centisome position: 88.74

GC content: 32.22

Gene sequence:

>537_bases
ATGTATCACTTAATAATAATTAGAATGAAAAAAATAACCGTTATTACAGCATTAACTATTGTTCTCTTTGTTACATATTC
TGCAAATGCTCAGAAAAATTCACAGCAGCTTGTTGAAGACTTCCAAAAATTGTCTGGCAGCTGGAACGGAAGCTTGACTT
ACTTAGATTATTCTTCCGGAAAACCCTATACAATGTCAGCAGATGTTGAAGTTAAAAGAATCAATAATTCTAATGAATTT
GAGTTCATTAATACTTACCCTAAAGAAAAAAGTGCCAACTCAACCCAAATTATTAGTATTTCACAAGATGGAAAATACAT
TGGTAAAGAAGAGGTAATCTCAAGAATGGAACTCGTCGATGGTCAAATACAAATTGTTACTCAAAAACAAGGAAAAGACG
GTAATGATAATAAGGAAGCCGTAATCAAGCAAACTTATACAATCAGCAAGACTGCATTTTCTATACGCAAAGACGTTTTA
TTTTCTGGAGATACTAAATGGATAAAGAGACACGAATATGCCTATTCAAGAAACTAA

Upstream 100 bases:

>100_bases
CAATTATTAAACTATTACGTGTTAAAAAAAAATACTAAAAAACTTACATAAAGTCAATTTTATTTCTTTTTCTTCTCTTT
AATTTTGATACTATCAAGTA

Downstream 100 bases:

>100_bases
AACTGCCTTCACCTAAGGCTGCTCCTATTTAAAGATTGTCAGCTGGATAAGATTATCTTTATATTAACATTAGATTTTCT
CTTGAGATTATAAAAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSGKPYTMSADVEVKRINNSNEF
EFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVDGQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVL
FSGDTKWIKRHEYAYSRN

Sequences:

>Translated_178_residues
MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSGKPYTMSADVEVKRINNSNEF
EFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVDGQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVL
FSGDTKWIKRHEYAYSRN
>Mature_178_residues
MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSGKPYTMSADVEVKRINNSNEF
EFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVDGQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVL
FSGDTKWIKRHEYAYSRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20357; Mature: 20357

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSG
CEEEEEEEEHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC
KPYTMSADVEVKRINNSNEFEFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVD
CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
GQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVLFSGDTKWIKRHEYAYSRN
CEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHHHHHHHEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MYHLIIIRMKKITVITALTIVLFVTYSANAQKNSQQLVEDFQKLSGSWNGSLTYLDYSSG
CEEEEEEEEHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC
KPYTMSADVEVKRINNSNEFEFINTYPKEKSANSTQIISISQDGKYIGKEEVISRMELVD
CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
GQIQIVTQKQGKDGNDNKEAVIKQTYTISKTAFSIRKDVLFSGDTKWIKRHEYAYSRN
CEEEEEEECCCCCCCCCCCEEEEEEEEEHHHHHHHHHHEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA