Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302207

Identifier: 146302207

GI number: 146302207

Start: 5400931

End: 5401452

Strand: Direct

Name: 146302207

Synonym: Fjoh_4478

Alternate gene names: NA

Gene position: 5400931-5401452 (Clockwise)

Preceding gene: 146302203

Following gene: 146302208

Centisome position: 88.59

GC content: 34.48

Gene sequence:

>522_bases
ATGAGAAGGCTTGGTATTTATATAACAGCATTTTTGTTTATAACAATGAGTTCCTGTGAATCTTCAAATGCAGCTGATTT
CAAGGAGTCGATCAATCAATCAGAACGCAGAGCTTTTGAAATTATTCTTGGAAAAAAAGGTTCAGGAGAAAAAAAGCTTA
ATTGTCTGGCAAAAGATGATTTTAAAGGAGCTTTAACAGCCGTGGATCAGCAGAGTAAAGAGTTTGATATCCTTATAGGC
GATATCAAAAAGCTTTCTACACAAGGTATTCCAAAAGGCGAACCTCTTAAAACTGCCTCTCTTGAATACTATCAGTCCCT
TAAAGAACTTCATGTATTTGATAGAAAAGAAATAGAGCAGGAAGCACTCCTGCGAACATTAAAGAACAATGAATTAAAGA
ATACTCAAAATAACCTTATAGTACTGGCAAGACAAAAAAAGATGCTTTATAACGCAGTATATGAAAAGGAAGCTCTACTA
CATACTGCAACTCAAAATTTTGATGCTGCCAATGGCTTTTAA

Upstream 100 bases:

>100_bases
CTAAAGTATTTCGTGAAATTTAGATTCCTGCTTCAGTCAATTTGAAGTTTTTTAAAGGAGTAATTTTCAATATTAGATTA
ACATCCATAAAACCATTATT

Downstream 100 bases:

>100_bases
CAAAGATTTTTTATGAATACCCAATATGTTATTTCCATTTTTTAGATAGAAATTGATATACTTTCTGCAAAAAAAGTCAG
TTGAAGGTGTCTATGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRRLGIYITAFLFITMSSCESSNAADFKESINQSERRAFEIILGKKGSGEKKLNCLAKDDFKGALTAVDQQSKEFDILIG
DIKKLSTQGIPKGEPLKTASLEYYQSLKELHVFDRKEIEQEALLRTLKNNELKNTQNNLIVLARQKKMLYNAVYEKEALL
HTATQNFDAANGF

Sequences:

>Translated_173_residues
MRRLGIYITAFLFITMSSCESSNAADFKESINQSERRAFEIILGKKGSGEKKLNCLAKDDFKGALTAVDQQSKEFDILIG
DIKKLSTQGIPKGEPLKTASLEYYQSLKELHVFDRKEIEQEALLRTLKNNELKNTQNNLIVLARQKKMLYNAVYEKEALL
HTATQNFDAANGF
>Mature_173_residues
MRRLGIYITAFLFITMSSCESSNAADFKESINQSERRAFEIILGKKGSGEKKLNCLAKDDFKGALTAVDQQSKEFDILIG
DIKKLSTQGIPKGEPLKTASLEYYQSLKELHVFDRKEIEQEALLRTLKNNELKNTQNNLIVLARQKKMLYNAVYEKEALL
HTATQNFDAANGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19600; Mature: 19600

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLGIYITAFLFITMSSCESSNAADFKESINQSERRAFEIILGKKGSGEKKLNCLAKDD
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHEECCCCCCCHHHEECCCCC
FKGALTAVDQQSKEFDILIGDIKKLSTQGIPKGEPLKTASLEYYQSLKELHVFDRKEIEQ
CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EALLRTLKNNELKNTQNNLIVLARQKKMLYNAVYEKEALLHTATQNFDAANGF
HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRLGIYITAFLFITMSSCESSNAADFKESINQSERRAFEIILGKKGSGEKKLNCLAKDD
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHEECCCCCCCHHHEECCCCC
FKGALTAVDQQSKEFDILIGDIKKLSTQGIPKGEPLKTASLEYYQSLKELHVFDRKEIEQ
CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EALLRTLKNNELKNTQNNLIVLARQKKMLYNAVYEKEALLHTATQNFDAANGF
HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA