Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302171

Identifier: 146302171

GI number: 146302171

Start: 5361399

End: 5361908

Strand: Direct

Name: 146302171

Synonym: Fjoh_4439

Alternate gene names: NA

Gene position: 5361399-5361908 (Clockwise)

Preceding gene: 146302170

Following gene: 146302172

Centisome position: 87.94

GC content: 34.12

Gene sequence:

>510_bases
ATGGAAACAATTATTTATGTAGCCGTTTCAGCCAACGGACTAATTTTATTGACAAGTGAAGACAATTATCAAATACCTGT
CGAGTTATTGCAGGACTGTATGGGTTTAGCTCATCAAACAGGAAATATGGTGATAGGATTAAATACATATCGTCTGTTTT
CTAATAATGCTAATGCTCTTGAAGCCTTTAAAGGAGTGGAAATTGCAGTACTTTCATCTAGCTGCGAAGAAGAACTCGAA
GGAGTCACTGTTCTAAAGAATATTGATGCGGTTAGGGAATTTTACAAAGCAAAAGGATATTCAAAAATATTTGTTGCCGG
CGGTGCCTATACCTATCAATCTTTTCTAAAAGAAGGACATGCAGATGAATTTTACATCAACTATCTTCCCATTTTAACAG
CTGCAGGAGCACTTCTTGTTAGTCATATACCAGCTGATAAAATTCTTGAAATAAAAGAAAATAAAGTAATTGCAGAAAAT
ATTGTTCAACTGCACTTTACAACAAAATAA

Upstream 100 bases:

>100_bases
CCGCTCTGCTCCATTTAATTTCCTAATTATTTCCTGTATGTCCATTGTGTACAATTTTATGCCAATCCTATAGTATAGTT
TTGCTCAAAAATATTCAACA

Downstream 100 bases:

>100_bases
TGTCAATTTTAGAAAACAATAAAATGAAAAAAGCGGTATTATTTGGAGCCAGTGGCTTTGTTGGTTCTGAATTGCTTTTA
AAATTATTAAACAACCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
METIIYVAVSANGLILLTSEDNYQIPVELLQDCMGLAHQTGNMVIGLNTYRLFSNNANALEAFKGVEIAVLSSSCEEELE
GVTVLKNIDAVREFYKAKGYSKIFVAGGAYTYQSFLKEGHADEFYINYLPILTAAGALLVSHIPADKILEIKENKVIAEN
IVQLHFTTK

Sequences:

>Translated_169_residues
METIIYVAVSANGLILLTSEDNYQIPVELLQDCMGLAHQTGNMVIGLNTYRLFSNNANALEAFKGVEIAVLSSSCEEELE
GVTVLKNIDAVREFYKAKGYSKIFVAGGAYTYQSFLKEGHADEFYINYLPILTAAGALLVSHIPADKILEIKENKVIAEN
IVQLHFTTK
>Mature_169_residues
METIIYVAVSANGLILLTSEDNYQIPVELLQDCMGLAHQTGNMVIGLNTYRLFSNNANALEAFKGVEIAVLSSSCEEELE
GVTVLKNIDAVREFYKAKGYSKIFVAGGAYTYQSFLKEGHADEFYINYLPILTAAGALLVSHIPADKILEIKENKVIAEN
IVQLHFTTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18625; Mature: 18625

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIIYVAVSANGLILLTSEDNYQIPVELLQDCMGLAHQTGNMVIGLNTYRLFSNNANAL
CCEEEEEEECCCCEEEEECCCCCEECHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHH
EAFKGVEIAVLSSSCEEELEGVTVLKNIDAVREFYKAKGYSKIFVAGGAYTYQSFLKEGH
HHHCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC
ADEFYINYLPILTAAGALLVSHIPADKILEIKENKVIAENIVQLHFTTK
CCEEEEEHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHEEEEEEECC
>Mature Secondary Structure
METIIYVAVSANGLILLTSEDNYQIPVELLQDCMGLAHQTGNMVIGLNTYRLFSNNANAL
CCEEEEEEECCCCEEEEECCCCCEECHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHH
EAFKGVEIAVLSSSCEEELEGVTVLKNIDAVREFYKAKGYSKIFVAGGAYTYQSFLKEGH
HHHCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC
ADEFYINYLPILTAAGALLVSHIPADKILEIKENKVIAENIVQLHFTTK
CCEEEEEHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA