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The map label for this gene is prrC [H]

Identifier: 146302130

GI number: 146302130

Start: 5299812

End: 5301044

Strand: Direct

Name: prrC [H]

Synonym: Fjoh_4395

Alternate gene names: 146302130

Gene position: 5299812-5301044 (Clockwise)

Preceding gene: 146302129

Following gene: 146302131

Centisome position: 86.93

GC content: 30.25

Gene sequence:

>1233_bases
ATGGCACAGTCATTAACTGAAATAGCACAAAAATTAAAAAATGCTGATAAAAAAGTAAAAGTACAATTGATTTATGCTTT
CAATGGCTCTGGAAAAACAAGGCTTTCACGTGAATTTAAAGAACTGATAGCTCCTAAAAATCCTGCGTTTGAGGAAGGCG
AAGAAGAATCAAAAATCAAGGTAATGTACTATAATGCATTTACCGAAGATTTGTTTTATTGGGATAATGATTTGGATAAC
GATTTAGATAGAAAATTAAAAATTCAGCCCAATGGTTATACCAATTGGGTACTTTTAGAACAAGGACAAGAGCCTAACAT
AGCGAAACATTTTCAACGCTATACAAATGATAAATTAACGCCTAATTTTAATCAAGAATATACAATTAAGGATAAGAATG
GTAAAGATTTAATTATTCATGTATATTCTGAAGTCAGATTCTCATTTGAACGAGGAAATGAAGAGCCTTCTGTATTTGTC
AAAATTTCCAAAGGAGAAGAGAGTTGTTTTATTTGGAGTATCTTTTACACTTTATTAGAGCAGGCTATCAATGTTTTAAA
TGTTGCAGAAGAAGGAGAACGTGAAACGAACCGATTTAATGATTTGAAATATGTTTTTATTGATGATCCAGTAAGTTCAT
TGGATGACAATCATTTGATTGAAATGGCTGTAAATATAGGTGAATTGATAAAATCAAGCCAATCAGAAGACCTTAAATTC
ATCATAACAACACATAATCCTTTATTTTACAATGTGTTATTCAATGAATTCAATAATTCAGATTTACGATATGGATACAA
ACCAAGGAATTGTATAAAATGGCGTTTAGAAAAACTAGATGATGGTACTTTTGACATTCATGCCCAGGGAAAAGATTCTC
CTTTTGCATATCATCTTTTCCTTTTGAATGAACTTGAAAAAGTCAGAGTTTCTGGAGATATTCAAAAATATCATTTTAAT
TTTCTTCGCAATATTTTAGAAAAAACTTCTACTTTTTTAGGATATTATGAATGGAAGAAACTTTTGCCAGATGATGCGGA
AGGTGCCCGAGAGGGTTATTATAAAAGAATTCTTGAACTTTCTAGTCATAGTAAAATTTCAAGCGAGGAAGTTTCTGCAT
TAACGACTCAAGAAAAAGATGTTTTAAAGCATTTAGTAGAAGAAATTAAAAAAATATACAAATTCAAATTGAACAATTAC
CAACCTGTAAATGAGGAAGATGTCACAGTATAA

Upstream 100 bases:

>100_bases
AGTGAAGGTCTGCCAAAAGAAATAGAATTAAGAAAAAAACAATACGAGTATTATAGAGACTTGTTACTAACATTTCCTAA
GAACAATCTAGAATAATAAT

Downstream 100 bases:

>100_bases
AACCATAGCAGAATCAAACAATTTTATTGTTTTAGATAAGTACGATAAATATTCAGTGCTTAATGAAGCACCTTCGAGTT
ATCAAACGGAGGCTGCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAQSLTEIAQKLKNADKKVKVQLIYAFNGSGKTRLSREFKELIAPKNPAFEEGEEESKIKVMYYNAFTEDLFYWDNDLDN
DLDRKLKIQPNGYTNWVLLEQGQEPNIAKHFQRYTNDKLTPNFNQEYTIKDKNGKDLIIHVYSEVRFSFERGNEEPSVFV
KISKGEESCFIWSIFYTLLEQAINVLNVAEEGERETNRFNDLKYVFIDDPVSSLDDNHLIEMAVNIGELIKSSQSEDLKF
IITTHNPLFYNVLFNEFNNSDLRYGYKPRNCIKWRLEKLDDGTFDIHAQGKDSPFAYHLFLLNELEKVRVSGDIQKYHFN
FLRNILEKTSTFLGYYEWKKLLPDDAEGAREGYYKRILELSSHSKISSEEVSALTTQEKDVLKHLVEEIKKIYKFKLNNY
QPVNEEDVTV

Sequences:

>Translated_410_residues
MAQSLTEIAQKLKNADKKVKVQLIYAFNGSGKTRLSREFKELIAPKNPAFEEGEEESKIKVMYYNAFTEDLFYWDNDLDN
DLDRKLKIQPNGYTNWVLLEQGQEPNIAKHFQRYTNDKLTPNFNQEYTIKDKNGKDLIIHVYSEVRFSFERGNEEPSVFV
KISKGEESCFIWSIFYTLLEQAINVLNVAEEGERETNRFNDLKYVFIDDPVSSLDDNHLIEMAVNIGELIKSSQSEDLKF
IITTHNPLFYNVLFNEFNNSDLRYGYKPRNCIKWRLEKLDDGTFDIHAQGKDSPFAYHLFLLNELEKVRVSGDIQKYHFN
FLRNILEKTSTFLGYYEWKKLLPDDAEGAREGYYKRILELSSHSKISSEEVSALTTQEKDVLKHLVEEIKKIYKFKLNNY
QPVNEEDVTV
>Mature_409_residues
AQSLTEIAQKLKNADKKVKVQLIYAFNGSGKTRLSREFKELIAPKNPAFEEGEEESKIKVMYYNAFTEDLFYWDNDLDND
LDRKLKIQPNGYTNWVLLEQGQEPNIAKHFQRYTNDKLTPNFNQEYTIKDKNGKDLIIHVYSEVRFSFERGNEEPSVFVK
ISKGEESCFIWSIFYTLLEQAINVLNVAEEGERETNRFNDLKYVFIDDPVSSLDDNHLIEMAVNIGELIKSSQSEDLKFI
ITTHNPLFYNVLFNEFNNSDLRYGYKPRNCIKWRLEKLDDGTFDIHAQGKDSPFAYHLFLLNELEKVRVSGDIQKYHFNF
LRNILEKTSTFLGYYEWKKLLPDDAEGAREGYYKRILELSSHSKISSEEVSALTTQEKDVLKHLVEEIKKIYKFKLNNYQ
PVNEEDVTV

Specific function: Anticodon nuclease triggers the cleavage ligation of tRNA(Lys). It is activated by T4 stp protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48136; Mature: 48004

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSLTEIAQKLKNADKKVKVQLIYAFNGSGKTRLSREFKELIAPKNPAFEEGEEESKIK
CCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEE
VMYYNAFTEDLFYWDNDLDNDLDRKLKIQPNGYTNWVLLEQGQEPNIAKHFQRYTNDKLT
EEEEECHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCC
PNFNQEYTIKDKNGKDLIIHVYSEVRFSFERGNEEPSVFVKISKGEESCFIWSIFYTLLE
CCCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHH
QAINVLNVAEEGERETNRFNDLKYVFIDDPVSSLDDNHLIEMAVNIGELIKSSQSEDLKF
HHHHHHHHHHCCCHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEE
IITTHNPLFYNVLFNEFNNSDLRYGYKPRNCIKWRLEKLDDGTFDIHAQGKDSPFAYHLF
EEEECCCEEEEEEHHCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEHE
LLNELEKVRVSGDIQKYHFNFLRNILEKTSTFLGYYEWKKLLPDDAEGAREGYYKRILEL
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SSHSKISSEEVSALTTQEKDVLKHLVEEIKKIYKFKLNNYQPVNEEDVTV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQSLTEIAQKLKNADKKVKVQLIYAFNGSGKTRLSREFKELIAPKNPAFEEGEEESKIK
CCHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEE
VMYYNAFTEDLFYWDNDLDNDLDRKLKIQPNGYTNWVLLEQGQEPNIAKHFQRYTNDKLT
EEEEECHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCC
PNFNQEYTIKDKNGKDLIIHVYSEVRFSFERGNEEPSVFVKISKGEESCFIWSIFYTLLE
CCCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHH
QAINVLNVAEEGERETNRFNDLKYVFIDDPVSSLDDNHLIEMAVNIGELIKSSQSEDLKF
HHHHHHHHHHCCCHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEE
IITTHNPLFYNVLFNEFNNSDLRYGYKPRNCIKWRLEKLDDGTFDIHAQGKDSPFAYHLF
EEEECCCEEEEEEHHCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEHE
LLNELEKVRVSGDIQKYHFNFLRNILEKTSTFLGYYEWKKLLPDDAEGAREGYYKRILEL
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SSHSKISSEEVSALTTQEKDVLKHLVEEIKKIYKFKLNNYQPVNEEDVTV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1691706 [H]