| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302102
Identifier: 146302102
GI number: 146302102
Start: 5270202
End: 5271119
Strand: Reverse
Name: 146302102
Synonym: Fjoh_4367
Alternate gene names: NA
Gene position: 5271119-5270202 (Counterclockwise)
Preceding gene: 146302103
Following gene: 146302101
Centisome position: 86.46
GC content: 27.45
Gene sequence:
>918_bases ATGCAAGCACTTTTACAGCACAAAACAAATCGTAAACATTTTCTTCTAATAGTTGCGTTGTTGTTTTTATTGATTATGGT AATTAGAATATTTGTAATGCCTCAATACCACGCGATTTCCCCTAGTGAAACCCCTGAATATATAAAATATATTGAAAATA TTCTCGATAATCTAACAACTTCATTATTTGTATCAGTCTTTATAGGACTATTTTTATTTTATATTGAAGTACCTAGTTCC GAGAAAAAACATGAAATTATTGCCCCAAATCGTTTGAATGAAATTTTTTCAAAAAATCAATTAAATACAGATTTTTGGTA TTTTTCCGGTGGAGCGGGTAGATATACTCGAGCTGAAACTATCCCAAAAATTTCAAAAAATTCAAAAGTTCAAAATGAGC ATAAAACAATTAAGATTCTTTTAATAGATCCGATGGATGATAAACTATGTAAAAGTTATGCGAACTTTAGGAATAGTTTG AATTCTTCAAAAAATGAATGGAATCTTAATTATGTTAGGAATGAAATCATTGCCACTATTTGTAATGCAGTAATACATAA AAGTTTAAATCAGATGTTAGAAGTTGATATCTTTCTAAAAAAAACTTTTTCTACATTACGTATTGATCTGAGCAAAAATA ATTGTGTCGTAACAAAGGAAGATAAAAAGGAATTTGCATTATTGATTCCAAATGACACATTTTTATACAAAACATATAAG GAAGAAATATTACAAGTAGCAAAACAATGTGAAGAGTTAGATATGCGTTGTGTTATGCAAGACCTTGATATTAAAGAAAT CAAACCAAGTGAAATTGAGGAAATTTGTTTACATTTTCATTTCAACTCAAAATTAGAGGAAAAAAATTTCATAGAAATCG CAGGAATTATCAATAAAAACAATAATCCCTATAAATGA
Upstream 100 bases:
>100_bases ACAACTTTTTTATTATATTTGAGGTAATACAAACGAAGGTTTTTTCACAGACTGACGTTAGGTGCCAGTTAAAACCAAAA TCAGGAATAAAATTATATAT
Downstream 100 bases:
>100_bases AAGATTTATATGAAAATTTACGAGATTCTTATAAAGAAAAAAATATTGCTAAAATAAAAAACAATATCAATCATATTTTA AATAATCTTTTAAATACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MQALLQHKTNRKHFLLIVALLFLLIMVIRIFVMPQYHAISPSETPEYIKYIENILDNLTTSLFVSVFIGLFLFYIEVPSS EKKHEIIAPNRLNEIFSKNQLNTDFWYFSGGAGRYTRAETIPKISKNSKVQNEHKTIKILLIDPMDDKLCKSYANFRNSL NSSKNEWNLNYVRNEIIATICNAVIHKSLNQMLEVDIFLKKTFSTLRIDLSKNNCVVTKEDKKEFALLIPNDTFLYKTYK EEILQVAKQCEELDMRCVMQDLDIKEIKPSEIEEICLHFHFNSKLEEKNFIEIAGIINKNNNPYK
Sequences:
>Translated_305_residues MQALLQHKTNRKHFLLIVALLFLLIMVIRIFVMPQYHAISPSETPEYIKYIENILDNLTTSLFVSVFIGLFLFYIEVPSS EKKHEIIAPNRLNEIFSKNQLNTDFWYFSGGAGRYTRAETIPKISKNSKVQNEHKTIKILLIDPMDDKLCKSYANFRNSL NSSKNEWNLNYVRNEIIATICNAVIHKSLNQMLEVDIFLKKTFSTLRIDLSKNNCVVTKEDKKEFALLIPNDTFLYKTYK EEILQVAKQCEELDMRCVMQDLDIKEIKPSEIEEICLHFHFNSKLEEKNFIEIAGIINKNNNPYK >Mature_305_residues MQALLQHKTNRKHFLLIVALLFLLIMVIRIFVMPQYHAISPSETPEYIKYIENILDNLTTSLFVSVFIGLFLFYIEVPSS EKKHEIIAPNRLNEIFSKNQLNTDFWYFSGGAGRYTRAETIPKISKNSKVQNEHKTIKILLIDPMDDKLCKSYANFRNSL NSSKNEWNLNYVRNEIIATICNAVIHKSLNQMLEVDIFLKKTFSTLRIDLSKNNCVVTKEDKKEFALLIPNDTFLYKTYK EEILQVAKQCEELDMRCVMQDLDIKEIKPSEIEEICLHFHFNSKLEEKNFIEIAGIINKNNNPYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35712; Mature: 35712
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALLQHKTNRKHFLLIVALLFLLIMVIRIFVMPQYHAISPSETPEYIKYIENILDNLTT CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH SLFVSVFIGLFLFYIEVPSSEKKHEIIAPNRLNEIFSKNQLNTDFWYFSGGAGRYTRAET HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH IPKISKNSKVQNEHKTIKILLIDPMDDKLCKSYANFRNSLNSSKNEWNLNYVRNEIIATI CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH CNAVIHKSLNQMLEVDIFLKKTFSTLRIDLSKNNCVVTKEDKKEFALLIPNDTFLYKTYK HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCEEEEECCCCEEHHHHH EEILQVAKQCEELDMRCVMQDLDIKEIKPSEIEEICLHFHFNSKLEEKNFIEIAGIINKN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC NNPYK CCCCC >Mature Secondary Structure MQALLQHKTNRKHFLLIVALLFLLIMVIRIFVMPQYHAISPSETPEYIKYIENILDNLTT CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH SLFVSVFIGLFLFYIEVPSSEKKHEIIAPNRLNEIFSKNQLNTDFWYFSGGAGRYTRAET HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH IPKISKNSKVQNEHKTIKILLIDPMDDKLCKSYANFRNSLNSSKNEWNLNYVRNEIIATI CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH CNAVIHKSLNQMLEVDIFLKKTFSTLRIDLSKNNCVVTKEDKKEFALLIPNDTFLYKTYK HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCEEEEECCCCEEHHHHH EEILQVAKQCEELDMRCVMQDLDIKEIKPSEIEEICLHFHFNSKLEEKNFIEIAGIINKN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC NNPYK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA