| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302101
Identifier: 146302101
GI number: 146302101
Start: 5269564
End: 5270205
Strand: Reverse
Name: 146302101
Synonym: Fjoh_4366
Alternate gene names: NA
Gene position: 5270205-5269564 (Counterclockwise)
Preceding gene: 146302102
Following gene: 146302098
Centisome position: 86.44
GC content: 25.23
Gene sequence:
>642_bases ATGAAAGATTTATATGAAAATTTACGAGATTCTTATAAAGAAAAAAATATTGCTAAAATAAAAAACAATATCAATCATAT TTTAAATAATCTTTTAAATACCGATTTTTTAGAACAAAATTTGAGGTATCATCCGTTAGGATTTATATATTGTAGATTAC ATGAGTTTGAAAATAAAGAAAATATTAGATTACATATTTGGAATAAATTTTCGAATATCCAAACTTCATCTATGGATAAA CATAATCACTTTTATGATGTTAACAGCTATGTTGTTAAGGGACAAATTATAAACACATTATATGCTTTAAAGGAAGATGA AGACATTAATTACTATCAATATAAGGGTAGCTACATTAATTCTGATAAAAGAATATTAACAAAGACAAATATTGGAAATA AACTAATTAAAATTAGTAGTACCATAATCAATTGTGGAGAGTTTTATAGAATCCCTAAAGAACATATTCATTCTGGTGGA GCAATTGGAGAGAGTATTACGATTACATATTCCGAAAATCCTGAAAACCCCACTCCTTTAATATTTGGAGAAATCGATGG AGAAAATGAGTATATTTATGAAAGTCAAAAAGTATCAAATAGTATTGTTAAATATATAAGATCGCAAATAACCGGCACCT AA
Upstream 100 bases:
>100_bases TTGAGGAAATTTGTTTACATTTTCATTTCAACTCAAAATTAGAGGAAAAAAATTTCATAGAAATCGCAGGAATTATCAAT AAAAACAATAATCCCTATAA
Downstream 100 bases:
>100_bases CAGCTAAGGGTTCGTTGCGTGCGTAGCACGAACAATGAAACCCGTGTTGAACTGAACTGCTGAGATTCCTCAACTATGGG TTTTTCGTAAAGATTTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKDLYENLRDSYKEKNIAKIKNNINHILNNLLNTDFLEQNLRYHPLGFIYCRLHEFENKENIRLHIWNKFSNIQTSSMDK HNHFYDVNSYVVKGQIINTLYALKEDEDINYYQYKGSYINSDKRILTKTNIGNKLIKISSTIINCGEFYRIPKEHIHSGG AIGESITITYSENPENPTPLIFGEIDGENEYIYESQKVSNSIVKYIRSQITGT
Sequences:
>Translated_213_residues MKDLYENLRDSYKEKNIAKIKNNINHILNNLLNTDFLEQNLRYHPLGFIYCRLHEFENKENIRLHIWNKFSNIQTSSMDK HNHFYDVNSYVVKGQIINTLYALKEDEDINYYQYKGSYINSDKRILTKTNIGNKLIKISSTIINCGEFYRIPKEHIHSGG AIGESITITYSENPENPTPLIFGEIDGENEYIYESQKVSNSIVKYIRSQITGT >Mature_213_residues MKDLYENLRDSYKEKNIAKIKNNINHILNNLLNTDFLEQNLRYHPLGFIYCRLHEFENKENIRLHIWNKFSNIQTSSMDK HNHFYDVNSYVVKGQIINTLYALKEDEDINYYQYKGSYINSDKRILTKTNIGNKLIKISSTIINCGEFYRIPKEHIHSGG AIGESITITYSENPENPTPLIFGEIDGENEYIYESQKVSNSIVKYIRSQITGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24970; Mature: 24970
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLYENLRDSYKEKNIAKIKNNINHILNNLLNTDFLEQNLRYHPLGFIYCRLHEFENKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEEEEEECCCCC NIRLHIWNKFSNIQTSSMDKHNHFYDVNSYVVKGQIINTLYALKEDEDINYYQYKGSYIN CEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHCCCCCCCEEEEECCEEC SDKRILTKTNIGNKLIKISSTIINCGEFYRIPKEHIHSGGAIGESITITYSENPENPTPL CCCEEEEECCCCCEEEEEHHHHHCCHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCCCE IFGEIDGENEYIYESQKVSNSIVKYIRSQITGT EEEEECCCCCEEECHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDLYENLRDSYKEKNIAKIKNNINHILNNLLNTDFLEQNLRYHPLGFIYCRLHEFENKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEEEEEECCCCC NIRLHIWNKFSNIQTSSMDKHNHFYDVNSYVVKGQIINTLYALKEDEDINYYQYKGSYIN CEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHCCCCCCCEEEEECCEEC SDKRILTKTNIGNKLIKISSTIINCGEFYRIPKEHIHSGGAIGESITITYSENPENPTPL CCCEEEEECCCCCEEEEEHHHHHCCHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCCCE IFGEIDGENEYIYESQKVSNSIVKYIRSQITGT EEEEECCCCCEEECHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA