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The map label for this gene is 146302097

Identifier: 146302097

GI number: 146302097

Start: 5265119

End: 5265988

Strand: Reverse

Name: 146302097

Synonym: Fjoh_4362

Alternate gene names: NA

Gene position: 5265988-5265119 (Counterclockwise)

Preceding gene: 146302098

Following gene: 146302096

Centisome position: 86.37

GC content: 31.49

Gene sequence:

>870_bases
ATGATTAGAGAAATCTTAAATACTGAGATTAAAAGCATTGAAAATGATGGTATTGATGTAGTATACATTACAGACTATAG
GGCAAAAAATATTGTACCGGTCCCATTTTCCATTTCAAATTTTTCCGTGCTTTTAATCAAAAGTGGTAAAATGAATATCA
GATTTCATGACGAAACTAATATAGTTAATCGGAAAGATTTATTGGTAATCCCATTTAATTCCATATGCACCAAGCTTGAA
GCTACGGATAATATCCAGCTATATCTTATAAGGACAAATTTTGATTTTGCATTTAATAATTGTTATGAGAAAGAGCTTTC
GGATGCTTTTAGTTTTCTAATGTTAAAATCAGATCGAAAGATTAGTCTTCAGGAAACGGATTTTAAGGTTTTGTCACTTA
TTTATAAATTAATGTATTTATTGCAGAACAGCAATGACAAACCGGAAGTAATTACTAAGCTGCGCCGGATATGCTTTAAT
TTATTTATATATGAACTCAAGTATATACATTCGAAATATAAACCCGACTTAAATCTTGACTTTTCAAGAAGGGAGAGCAT
TGTAATACAGTTCCTGACTCTACTATCAATACATTTGAGAAAACAGCATCATGTTCAGTTTTATGCAGGAGCATTATTTA
TCACTCCAGGACATTTGAATAAGATGGTAAAAGAAAGCACAGGTAAAACAGCTAAAGCATTTATAATTGAAGCTCTTGTC
AATGTTTCAAAAAATCTTCTTACGGACTCAAGCTATTCCGTGGCTAATATTGCCGATGAATTAGAATTTAGCAGCGCTGA
AAACTTTGGCGTATTTTTTAAAAGACATACCGGTATGCTGCCAACCGAATTTCGTTCTAATAAAAAATAA

Upstream 100 bases:

>100_bases
CGTCTGCTGTTTGTCTAATTTATATTTCCAGTTTTTTACATGGATGGAATATTTTTTCAAGGATGAAATTTAAAAGGAGA
TCTAAACTAAAAGAACAAAA

Downstream 100 bases:

>100_bases
ACTGCCAACACAGCTCCTTATTCTGCCAGAGATTGTTTAATTAAAACGATAAGACGATGATTAAAATGTATCCTTTGGAA
TGGTTTGATTCGTTGATTAT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC-Family Regulatory Protein; AraC-Type Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix Protein; AraC-Family Transcriptional Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; AraC-Type Transcriptional Regulator

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIREILNTEIKSIENDGIDVVYITDYRAKNIVPVPFSISNFSVLLIKSGKMNIRFHDETNIVNRKDLLVIPFNSICTKLE
ATDNIQLYLIRTNFDFAFNNCYEKELSDAFSFLMLKSDRKISLQETDFKVLSLIYKLMYLLQNSNDKPEVITKLRRICFN
LFIYELKYIHSKYKPDLNLDFSRRESIVIQFLTLLSIHLRKQHHVQFYAGALFITPGHLNKMVKESTGKTAKAFIIEALV
NVSKNLLTDSSYSVANIADELEFSSAENFGVFFKRHTGMLPTEFRSNKK

Sequences:

>Translated_289_residues
MIREILNTEIKSIENDGIDVVYITDYRAKNIVPVPFSISNFSVLLIKSGKMNIRFHDETNIVNRKDLLVIPFNSICTKLE
ATDNIQLYLIRTNFDFAFNNCYEKELSDAFSFLMLKSDRKISLQETDFKVLSLIYKLMYLLQNSNDKPEVITKLRRICFN
LFIYELKYIHSKYKPDLNLDFSRRESIVIQFLTLLSIHLRKQHHVQFYAGALFITPGHLNKMVKESTGKTAKAFIIEALV
NVSKNLLTDSSYSVANIADELEFSSAENFGVFFKRHTGMLPTEFRSNKK
>Mature_289_residues
MIREILNTEIKSIENDGIDVVYITDYRAKNIVPVPFSISNFSVLLIKSGKMNIRFHDETNIVNRKDLLVIPFNSICTKLE
ATDNIQLYLIRTNFDFAFNNCYEKELSDAFSFLMLKSDRKISLQETDFKVLSLIYKLMYLLQNSNDKPEVITKLRRICFN
LFIYELKYIHSKYKPDLNLDFSRRESIVIQFLTLLSIHLRKQHHVQFYAGALFITPGHLNKMVKESTGKTAKAFIIEALV
NVSKNLLTDSSYSVANIADELEFSSAENFGVFFKRHTGMLPTEFRSNKK

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33570; Mature: 33570

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIREILNTEIKSIENDGIDVVYITDYRAKNIVPVPFSISNFSVLLIKSGKMNIRFHDETN
CCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCEECCCEEEEEEECCCEEEEECCCCC
IVNRKDLLVIPFNSICTKLEATDNIQLYLIRTNFDFAFNNCYEKELSDAFSFLMLKSDRK
CCCCCCEEEEEHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCC
ISLQETDFKVLSLIYKLMYLLQNSNDKPEVITKLRRICFNLFIYELKYIHSKYKPDLNLD
EEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FSRRESIVIQFLTLLSIHLRKQHHVQFYAGALFITPGHLNKMVKESTGKTAKAFIIEALV
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHH
NVSKNLLTDSSYSVANIADELEFSSAENFGVFFKRHTGMLPTEFRSNKK
HHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCCC
>Mature Secondary Structure
MIREILNTEIKSIENDGIDVVYITDYRAKNIVPVPFSISNFSVLLIKSGKMNIRFHDETN
CCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCEECCCEEEEEEECCCEEEEECCCCC
IVNRKDLLVIPFNSICTKLEATDNIQLYLIRTNFDFAFNNCYEKELSDAFSFLMLKSDRK
CCCCCCEEEEEHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCC
ISLQETDFKVLSLIYKLMYLLQNSNDKPEVITKLRRICFNLFIYELKYIHSKYKPDLNLD
EEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FSRRESIVIQFLTLLSIHLRKQHHVQFYAGALFITPGHLNKMVKESTGKTAKAFIIEALV
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHH
NVSKNLLTDSSYSVANIADELEFSSAENFGVFFKRHTGMLPTEFRSNKK
HHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA