| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302098
Identifier: 146302098
GI number: 146302098
Start: 5266326
End: 5266931
Strand: Reverse
Name: 146302098
Synonym: Fjoh_4363
Alternate gene names: NA
Gene position: 5266931-5266326 (Counterclockwise)
Preceding gene: 146302101
Following gene: 146302097
Centisome position: 86.39
GC content: 34.98
Gene sequence:
>606_bases ATGAAAAATTTATTATTAACTGGTTTAATTATTTTATTAGTTTCATGTTCAAATGACGATTTTGACAATTCTGATTTAAG ATTGGTTTCCAGCCAAGCAATCAGCAAAGAGAAAACTGCAGATTTTAAAAATGGGTCTGCTTTAGAGGAAAACTTTAAGG AAGTTCAAGCGGGAGATTACGTACTTCTAGTTCCTGCCCAATTAAAAGAAAAGATCATTTCAGTATTAAAAGCCCAACCT GGGCGAAATGAACTAAAGACTTTTGAGAAAGGCACTTCTGCTTTAGATACAATTTCTTCTACGGAGGATCCTGTCTCAAC ATTATTTATAATTGTTGATGAAAGTACATTGGGATCATCATTGAAACTTGATATGAAAGGGTATATAGTCAGTCTCGGAA ATCTTCGCAGCCAGCAGTATCACATCGTGGATGATTTTATAATTCAATACGAGATTTCAAAAAGACAGGATTCAACACTT CTAACAGACGAAAAGGAATCCATTTTATCTATTTCTTCAATTTCGGAAGCAGTTTTATTTAGTGAAAAGGACAGAAAGGA CAGAGATTGGGAGACATCCACCACCAGTAGGAGTACCGGACATTAG
Upstream 100 bases:
>100_bases TTCAACAGCAAAAGATTCAGTAAAGTACTGAGCAAAAGTTCTGCTGGCCCGGGTAAAATGGACTGAGACAAGTTCTCAAT TAACCAAACCATTTTGCATT
Downstream 100 bases:
>100_bases TGATGTAACGACGTGATTGAAGTTGAATCACTTCCTGCTTTAATATAGTTGATTAATAATTTTCTAATCTATCTGATTTA TGAAAAAGAGAGCTTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKNLLLTGLIILLVSCSNDDFDNSDLRLVSSQAISKEKTADFKNGSALEENFKEVQAGDYVLLVPAQLKEKIISVLKAQP GRNELKTFEKGTSALDTISSTEDPVSTLFIIVDESTLGSSLKLDMKGYIVSLGNLRSQQYHIVDDFIIQYEISKRQDSTL LTDEKESILSISSISEAVLFSEKDRKDRDWETSTTSRSTGH
Sequences:
>Translated_201_residues MKNLLLTGLIILLVSCSNDDFDNSDLRLVSSQAISKEKTADFKNGSALEENFKEVQAGDYVLLVPAQLKEKIISVLKAQP GRNELKTFEKGTSALDTISSTEDPVSTLFIIVDESTLGSSLKLDMKGYIVSLGNLRSQQYHIVDDFIIQYEISKRQDSTL LTDEKESILSISSISEAVLFSEKDRKDRDWETSTTSRSTGH >Mature_201_residues MKNLLLTGLIILLVSCSNDDFDNSDLRLVSSQAISKEKTADFKNGSALEENFKEVQAGDYVLLVPAQLKEKIISVLKAQP GRNELKTFEKGTSALDTISSTEDPVSTLFIIVDESTLGSSLKLDMKGYIVSLGNLRSQQYHIVDDFIIQYEISKRQDSTL LTDEKESILSISSISEAVLFSEKDRKDRDWETSTTSRSTGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22345; Mature: 22345
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLTGLIILLVSCSNDDFDNSDLRLVSSQAISKEKTADFKNGSALEENFKEVQAGDY CCHHHHHHHHHHEEECCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCE VLLVPAQLKEKIISVLKAQPGRNELKTFEKGTSALDTISSTEDPVSTLFIIVDESTLGSS EEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEECCCCCCE LKLDMKGYIVSLGNLRSQQYHIVDDFIIQYEISKRQDSTLLTDEKESILSISSISEAVLF EEEECCCEEEEECCCCCCCEEEEEHEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHH SEKDRKDRDWETSTTSRSTGH CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNLLLTGLIILLVSCSNDDFDNSDLRLVSSQAISKEKTADFKNGSALEENFKEVQAGDY CCHHHHHHHHHHEEECCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCE VLLVPAQLKEKIISVLKAQPGRNELKTFEKGTSALDTISSTEDPVSTLFIIVDESTLGSS EEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEECCCCCCE LKLDMKGYIVSLGNLRSQQYHIVDDFIIQYEISKRQDSTLLTDEKESILSISSISEAVLF EEEECCCEEEEECCCCCCCEEEEEHEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHH SEKDRKDRDWETSTTSRSTGH CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA