| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302071
Identifier: 146302071
GI number: 146302071
Start: 5240356
End: 5241210
Strand: Reverse
Name: 146302071
Synonym: Fjoh_4335
Alternate gene names: NA
Gene position: 5241210-5240356 (Counterclockwise)
Preceding gene: 146302072
Following gene: 146302070
Centisome position: 85.97
GC content: 32.16
Gene sequence:
>855_bases ATGTTGTTTCTTATTTTAAGTGTATTGTGCAGTGTTACGGTGGGTGTGATTTTCAAAATAACCCGAAAATACAATGCAGA TCCTATTCAGATTATTACGTTCAATTATGTAACAGCCTTAATACTCTGCTATTTTACCTTTAGTCCGGATTTAACGGTTG TTCATGCAGATGCACCTTGGAATATTTATGCAGCAGTGGGCGTTTTACTGCCAATTGTTTTCTTGTTTTTGTTTACTTCC ATCAAATATATGGGAATCGTAAAGACTGATGCCGCACAGCGTTTGTCTTTGTTTATTCCGATAATTGCCGCCTGGTTAAT TTTTAAGGAAGATTTTAATACTTATAAAGTTATCGGACTTATAATTGGTTTTATAGCCCTTCTTTTCATCTTAAGAAAGC AATCAACTAACGATCAGAACAAATGGATATTTCCGGCCGCTGTATTTTTAGGATTCGGGATTATCGATATTCTTTTTAAA CAGATTGCGCTTTTTACCGCTTTGCCTTATACAACATCTTTGTTTATTGTATTTGATATTTCTCTTGCCGTTTCTTTATT GGTAGTAGTGTATAATGTAGTTTTGAAAAAAGTAAAATTAAGTTCTAAAAATATTCTTTTTGGAGCCTTAGTTGGTATTT TCAATTTCGGAAATATTCTATTTTATTTAAAAGCACATAAAGCTTTTGCCGAAAATCCTTCAACAGTTTTTGCCGGAATG AATATGGGAGTTATTGTTTTAGGAAGTCTTGTCGGTCTGCTTTTTTTCAAAGAAAAACTATCAAAAATTAACTTCATAGG TATCTTTTTAGCCTTAATTGCGATCATTTTTATCGTTTTCTCGCAATTTATGTAA
Upstream 100 bases:
>100_bases TTTCTTTTTAGAATTTTAATCTGGTCTAGCCGGTTTTTTAAAACCGGCTGGGCCTTTTAAATTTAGAATACTTTACTTTT ACCCCTCAAAATATAAATTT
Downstream 100 bases:
>100_bases TTTTTTTTACTGTTTTAAGGTCTTAATTTACAGTTGTTTTGCTGTTAATTTGCATTTTTTTTAAAATTAACTCTACTAAT TCGATAGAATTTATAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPWNIYAAVGVLLPIVFLFLFTS IKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGLIIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFK QIALFTALPYTTSLFIVFDISLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM
Sequences:
>Translated_284_residues MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPWNIYAAVGVLLPIVFLFLFTS IKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGLIIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFK QIALFTALPYTTSLFIVFDISLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM >Mature_284_residues MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPWNIYAAVGVLLPIVFLFLFTS IKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGLIIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFK QIALFTALPYTTSLFIVFDISLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31754; Mature: 31754
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPW CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCC NIYAAVGVLLPIVFLFLFTSIKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGL HHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFKQIALFTALPYTTSLFIVFDI HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPW CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCC NIYAAVGVLLPIVFLFLFTSIKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGL HHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFKQIALFTALPYTTSLFIVFDI HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]