Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302071

Identifier: 146302071

GI number: 146302071

Start: 5240356

End: 5241210

Strand: Reverse

Name: 146302071

Synonym: Fjoh_4335

Alternate gene names: NA

Gene position: 5241210-5240356 (Counterclockwise)

Preceding gene: 146302072

Following gene: 146302070

Centisome position: 85.97

GC content: 32.16

Gene sequence:

>855_bases
ATGTTGTTTCTTATTTTAAGTGTATTGTGCAGTGTTACGGTGGGTGTGATTTTCAAAATAACCCGAAAATACAATGCAGA
TCCTATTCAGATTATTACGTTCAATTATGTAACAGCCTTAATACTCTGCTATTTTACCTTTAGTCCGGATTTAACGGTTG
TTCATGCAGATGCACCTTGGAATATTTATGCAGCAGTGGGCGTTTTACTGCCAATTGTTTTCTTGTTTTTGTTTACTTCC
ATCAAATATATGGGAATCGTAAAGACTGATGCCGCACAGCGTTTGTCTTTGTTTATTCCGATAATTGCCGCCTGGTTAAT
TTTTAAGGAAGATTTTAATACTTATAAAGTTATCGGACTTATAATTGGTTTTATAGCCCTTCTTTTCATCTTAAGAAAGC
AATCAACTAACGATCAGAACAAATGGATATTTCCGGCCGCTGTATTTTTAGGATTCGGGATTATCGATATTCTTTTTAAA
CAGATTGCGCTTTTTACCGCTTTGCCTTATACAACATCTTTGTTTATTGTATTTGATATTTCTCTTGCCGTTTCTTTATT
GGTAGTAGTGTATAATGTAGTTTTGAAAAAAGTAAAATTAAGTTCTAAAAATATTCTTTTTGGAGCCTTAGTTGGTATTT
TCAATTTCGGAAATATTCTATTTTATTTAAAAGCACATAAAGCTTTTGCCGAAAATCCTTCAACAGTTTTTGCCGGAATG
AATATGGGAGTTATTGTTTTAGGAAGTCTTGTCGGTCTGCTTTTTTTCAAAGAAAAACTATCAAAAATTAACTTCATAGG
TATCTTTTTAGCCTTAATTGCGATCATTTTTATCGTTTTCTCGCAATTTATGTAA

Upstream 100 bases:

>100_bases
TTTCTTTTTAGAATTTTAATCTGGTCTAGCCGGTTTTTTAAAACCGGCTGGGCCTTTTAAATTTAGAATACTTTACTTTT
ACCCCTCAAAATATAAATTT

Downstream 100 bases:

>100_bases
TTTTTTTTACTGTTTTAAGGTCTTAATTTACAGTTGTTTTGCTGTTAATTTGCATTTTTTTTAAAATTAACTCTACTAAT
TCGATAGAATTTATAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPWNIYAAVGVLLPIVFLFLFTS
IKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGLIIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFK
QIALFTALPYTTSLFIVFDISLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM
NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM

Sequences:

>Translated_284_residues
MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPWNIYAAVGVLLPIVFLFLFTS
IKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGLIIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFK
QIALFTALPYTTSLFIVFDISLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM
NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM
>Mature_284_residues
MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPWNIYAAVGVLLPIVFLFLFTS
IKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGLIIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFK
QIALFTALPYTTSLFIVFDISLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM
NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31754; Mature: 31754

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCC
NIYAAVGVLLPIVFLFLFTSIKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFKQIALFTALPYTTSLFIVFDI
HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLFLILSVLCSVTVGVIFKITRKYNADPIQIITFNYVTALILCYFTFSPDLTVVHADAPW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCC
NIYAAVGVLLPIVFLFLFTSIKYMGIVKTDAAQRLSLFIPIIAAWLIFKEDFNTYKVIGL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IIGFIALLFILRKQSTNDQNKWIFPAAVFLGFGIIDILFKQIALFTALPYTTSLFIVFDI
HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SLAVSLLVVVYNVVLKKVKLSSKNILFGALVGIFNFGNILFYLKAHKAFAENPSTVFAGM
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
NMGVIVLGSLVGLLFFKEKLSKINFIGIFLALIAIIFIVFSQFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]