| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302067
Identifier: 146302067
GI number: 146302067
Start: 5234440
End: 5234961
Strand: Reverse
Name: 146302067
Synonym: Fjoh_4331
Alternate gene names: NA
Gene position: 5234961-5234440 (Counterclockwise)
Preceding gene: 146302069
Following gene: 146302066
Centisome position: 85.86
GC content: 34.48
Gene sequence:
>522_bases ATGAGAAGTAAAAGTTATTACTGGTTAGCTCTTTTTATGTGTTTTTTCGCCATTAGCTGCGATAATACAGAAGACGGCAG CTATGTTGATCCAATTACGATTTATGAGAAAGTAAATGGCAATTGGGGATTAACAAATTTAAAGATGGTTGATGAATTTG CTAAGACAAATAAGATCGAACCAAACGAAGAAAACTTGAGTACTTTTTTTAACTACGAAGATTTTAAAATTAATTTCAGC GTAGACGAAAAAAACAGACCTACAAGTTATGAAGTAACGGGGAATGTTCCTCCTTTATTTGCTCTAAAAGGATACTGGGA ACTAAGTTCAGATTTTCAGCAGACTAATGCCAGTGCGGTTAAAATTTACTTATACAGCGACGCACAAAAAACTCAAAAAA CAGACGAACTTAGATTATCATCTGTCCCTGGAAAGAGCGGCGAAATGGAATTTCAGCTGGTACGTTCTTCAGAAGGAACT GCGTTTTTGACTTATGTATTCAAATTAAATGCTATTAACTAA
Upstream 100 bases:
>100_bases TATCTTGATTTTTCGCAGATATTTTTTTTTAGATTTATTTAAGATCTAGTTTCGTACTGTCCTTTTAAGAGGATGAAAAA CTAACAAAAACCAAAAATTT
Downstream 100 bases:
>100_bases AAAGTAATATGAAAAAATTTCTATATACAATTTTACTTGCCCTTTTGATGGCTCCTAATTTTACTAAGGCACAAGAAGCC GCAGGAGCTGTTGGTGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRSKSYYWLALFMCFFAISCDNTEDGSYVDPITIYEKVNGNWGLTNLKMVDEFAKTNKIEPNEENLSTFFNYEDFKINFS VDEKNRPTSYEVTGNVPPLFALKGYWELSSDFQQTNASAVKIYLYSDAQKTQKTDELRLSSVPGKSGEMEFQLVRSSEGT AFLTYVFKLNAIN
Sequences:
>Translated_173_residues MRSKSYYWLALFMCFFAISCDNTEDGSYVDPITIYEKVNGNWGLTNLKMVDEFAKTNKIEPNEENLSTFFNYEDFKINFS VDEKNRPTSYEVTGNVPPLFALKGYWELSSDFQQTNASAVKIYLYSDAQKTQKTDELRLSSVPGKSGEMEFQLVRSSEGT AFLTYVFKLNAIN >Mature_173_residues MRSKSYYWLALFMCFFAISCDNTEDGSYVDPITIYEKVNGNWGLTNLKMVDEFAKTNKIEPNEENLSTFFNYEDFKINFS VDEKNRPTSYEVTGNVPPLFALKGYWELSSDFQQTNASAVKIYLYSDAQKTQKTDELRLSSVPGKSGEMEFQLVRSSEGT AFLTYVFKLNAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19878; Mature: 19878
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKSYYWLALFMCFFAISCDNTEDGSYVDPITIYEKVNGNWGLTNLKMVDEFAKTNKIE CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHCCCC PNEENLSTFFNYEDFKINFSVDEKNRPTSYEVTGNVPPLFALKGYWELSSDFQQTNASAV CCCCCHHEEECCEEEEEEEEECCCCCCCEEEEECCCCCEEEEECEECCCCCHHHCCCCEE KIYLYSDAQKTQKTDELRLSSVPGKSGEMEFQLVRSSEGTAFLTYVFKLNAIN EEEEECCCCHHCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCC >Mature Secondary Structure MRSKSYYWLALFMCFFAISCDNTEDGSYVDPITIYEKVNGNWGLTNLKMVDEFAKTNKIE CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHCCCC PNEENLSTFFNYEDFKINFSVDEKNRPTSYEVTGNVPPLFALKGYWELSSDFQQTNASAV CCCCCHHEEECCEEEEEEEEECCCCCCCEEEEECCCCCEEEEECEECCCCCHHHCCCCEE KIYLYSDAQKTQKTDELRLSSVPGKSGEMEFQLVRSSEGTAFLTYVFKLNAIN EEEEECCCCHHCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA