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The map label for this gene is 146302064

Identifier: 146302064

GI number: 146302064

Start: 5228764

End: 5230278

Strand: Reverse

Name: 146302064

Synonym: Fjoh_4328

Alternate gene names: NA

Gene position: 5230278-5228764 (Counterclockwise)

Preceding gene: 146302065

Following gene: 146302063

Centisome position: 85.79

GC content: 36.11

Gene sequence:

>1515_bases
ATGAAAATCAAAATAACAGCAGCATTATTAGTAAGCATGCTTTTTACGATATCATGTACCAACTTAAATGAGGATTTATA
CGACAAGGTACAGGATGGAAATTTTGGAAATACTCCAAAAGAAGTTGATGCATTGGTAGGAGGAGCATATTCTTCGTTAA
GAGGATTTGCTGATAATATATCGAACAATTACCCAACCTGTGAGTTTGTATTCTTTTTGAATGAAACAGTTTCTGATGAA
GCTACTATTCCAACAAGGGGAACAAACTGGTACGATGGCGGACAATATCAGGACGCACAAAAACATACCTGGAAAGCAGA
TAACCGTTTGATTCTTGCAGCATGGCGTTACAACTACACCGGAATTGCAAAAATTAACGCGATCATTTATCAAATCGATA
AATCATCTTTAAGCGATGCGTCAAAAGCACCAATTTATGCAGAATTAAAAGCATTAAGAGCATATTACTATTACAATCTT
TTAGATGCATTTGGAAACGTGCCTATCGTTACCAATTTTGAAGACACTTCATTACCGTCAAATTCTACAAGAAAACAAGT
ATATGATTTTGTCGAAAAAGAATTCTTAGATGCAATTCCATATTTATCATCAAATGTGGTGTATTCTAAAATGACAAAAA
ATGTAGCATATTCTATCTTAGCAAGATTATATCTTAACTCTGAAGCTTTCATAGGAACACCACGCTGGCAGGATTGTATC
AATATGTGCCAAAAAGTTTCAGGTTACACATTAACACCAGATTTCTTTACCAATTTCTCAACAGAAAATGAGAAATCGCC
TGAAATTATTTTTGCTATTCCTTACGATTCAAAAGCTGGAACAGTTGGAAATTACATGAACTCAATGTCATGCCACTACC
TGCACAGATTAACAATGTCTGTTTCTGGAAACGATTATCCTTGGAGCGCAAACGGAATGTGCGCACAGCCGGGAGTATAT
TCTTCTTTTGCAGATACAGATAAAAGAAAGAAATGTATGGTTGCCGGAGACCAGATCAACATGGCAACAGGAACTGTAAT
TATGATGGATAACGGAGAACCTCTAACTTATACTGAGGAAGTTACAAGTGTAGCTAACGCTAAAGACAATCAGGGAGTTC
GTTTAGGAAAATACGAAATGAAAGCCGGAGAAACTTGGGAACGCGATCACGATTTAGTTTTAATTCGTTATGCCGAAATT
TTAATGATGCAGGCAGAATGTTACGTTCGTTTAGGTTCACCAGATTTGGCAAAACCATTTGTACAGCAGATAACATCTCG
TGCTGGAGCAGAAATGCCGGCAGTAATTGATCTTGACTTTATTGATAAAGAATTACTAAGAGAATTTACTTTCGAAGGAA
GAAGAAGAACTGATAATATTCGTTTTGGAACATTCTTCAATCCATGGTGGGAAAAAGGAACAACTGAAAAATACAGAGCA
ATTTTCCCAATTCCTAGTACAGTTTTAACGACTAATAAAAATCTGGTACAAAATCCTGGGTACCCGGTAAATTAG

Upstream 100 bases:

>100_bases
TGGTATAGACAAGTACAACAATTATCCTAGACCAACTACAATTTCTGTTGGATTAAACTTTACGCTTAATAACTAGGCGA
CTAACTCAAAAATAGAAAAA

Downstream 100 bases:

>100_bases
GTTACTGAATGTCAGTCTTCCATGTTGGTTAGTCGTGGAAGGCTGACATATTTTAAAATGAGAATATCTGAATGGCTTCA
ATTTTAATGAAAATATTTTT

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; SusD Outer Membrane Protein; SusD Family Protein; RagB/SusD Family Protein; Lipoprotein; Liporotein; Outer Membrane Protein SusD

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MKIKITAALLVSMLFTISCTNLNEDLYDKVQDGNFGNTPKEVDALVGGAYSSLRGFADNISNNYPTCEFVFFLNETVSDE
ATIPTRGTNWYDGGQYQDAQKHTWKADNRLILAAWRYNYTGIAKINAIIYQIDKSSLSDASKAPIYAELKALRAYYYYNL
LDAFGNVPIVTNFEDTSLPSNSTRKQVYDFVEKEFLDAIPYLSSNVVYSKMTKNVAYSILARLYLNSEAFIGTPRWQDCI
NMCQKVSGYTLTPDFFTNFSTENEKSPEIIFAIPYDSKAGTVGNYMNSMSCHYLHRLTMSVSGNDYPWSANGMCAQPGVY
SSFADTDKRKKCMVAGDQINMATGTVIMMDNGEPLTYTEEVTSVANAKDNQGVRLGKYEMKAGETWERDHDLVLIRYAEI
LMMQAECYVRLGSPDLAKPFVQQITSRAGAEMPAVIDLDFIDKELLREFTFEGRRRTDNIRFGTFFNPWWEKGTTEKYRA
IFPIPSTVLTTNKNLVQNPGYPVN

Sequences:

>Translated_504_residues
MKIKITAALLVSMLFTISCTNLNEDLYDKVQDGNFGNTPKEVDALVGGAYSSLRGFADNISNNYPTCEFVFFLNETVSDE
ATIPTRGTNWYDGGQYQDAQKHTWKADNRLILAAWRYNYTGIAKINAIIYQIDKSSLSDASKAPIYAELKALRAYYYYNL
LDAFGNVPIVTNFEDTSLPSNSTRKQVYDFVEKEFLDAIPYLSSNVVYSKMTKNVAYSILARLYLNSEAFIGTPRWQDCI
NMCQKVSGYTLTPDFFTNFSTENEKSPEIIFAIPYDSKAGTVGNYMNSMSCHYLHRLTMSVSGNDYPWSANGMCAQPGVY
SSFADTDKRKKCMVAGDQINMATGTVIMMDNGEPLTYTEEVTSVANAKDNQGVRLGKYEMKAGETWERDHDLVLIRYAEI
LMMQAECYVRLGSPDLAKPFVQQITSRAGAEMPAVIDLDFIDKELLREFTFEGRRRTDNIRFGTFFNPWWEKGTTEKYRA
IFPIPSTVLTTNKNLVQNPGYPVN
>Mature_504_residues
MKIKITAALLVSMLFTISCTNLNEDLYDKVQDGNFGNTPKEVDALVGGAYSSLRGFADNISNNYPTCEFVFFLNETVSDE
ATIPTRGTNWYDGGQYQDAQKHTWKADNRLILAAWRYNYTGIAKINAIIYQIDKSSLSDASKAPIYAELKALRAYYYYNL
LDAFGNVPIVTNFEDTSLPSNSTRKQVYDFVEKEFLDAIPYLSSNVVYSKMTKNVAYSILARLYLNSEAFIGTPRWQDCI
NMCQKVSGYTLTPDFFTNFSTENEKSPEIIFAIPYDSKAGTVGNYMNSMSCHYLHRLTMSVSGNDYPWSANGMCAQPGVY
SSFADTDKRKKCMVAGDQINMATGTVIMMDNGEPLTYTEEVTSVANAKDNQGVRLGKYEMKAGETWERDHDLVLIRYAEI
LMMQAECYVRLGSPDLAKPFVQQITSRAGAEMPAVIDLDFIDKELLREFTFEGRRRTDNIRFGTFFNPWWEKGTTEKYRA
IFPIPSTVLTTNKNLVQNPGYPVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56983; Mature: 56983

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKITAALLVSMLFTISCTNLNEDLYDKVQDGNFGNTPKEVDALVGGAYSSLRGFADNI
CEEEEHHHHHHHHHHHHEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SNNYPTCEFVFFLNETVSDEATIPTRGTNWYDGGQYQDAQKHTWKADNRLILAAWRYNYT
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCC
GIAKINAIIYQIDKSSLSDASKAPIYAELKALRAYYYYNLLDAFGNVPIVTNFEDTSLPS
CCEEEEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
NSTRKQVYDFVEKEFLDAIPYLSSNVVYSKMTKNVAYSILARLYLNSEAFIGTPRWQDCI
CCHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
NMCQKVSGYTLTPDFFTNFSTENEKSPEIIFAIPYDSKAGTVGNYMNSMSCHYLHRLTMS
HHHHHHCCCEECHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHEEEEEEEE
VSGNDYPWSANGMCAQPGVYSSFADTDKRKKCMVAGDQINMATGTVIMMDNGEPLTYTEE
ECCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCEEEEEECEEEEEECCCCCEEHHH
VTSVANAKDNQGVRLGKYEMKAGETWERDHDLVLIRYAEILMMQAECYVRLGSPDLAKPF
HHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHEEEEEEEECCCHHHHHH
VQQITSRAGAEMPAVIDLDFIDKELLREFTFEGRRRTDNIRFGTFFNPWWEKGTTEKYRA
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCCCEEE
IFPIPSTVLTTNKNLVQNPGYPVN
EECCCCEEEECCCHHHCCCCCCCC
>Mature Secondary Structure
MKIKITAALLVSMLFTISCTNLNEDLYDKVQDGNFGNTPKEVDALVGGAYSSLRGFADNI
CEEEEHHHHHHHHHHHHEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SNNYPTCEFVFFLNETVSDEATIPTRGTNWYDGGQYQDAQKHTWKADNRLILAAWRYNYT
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCC
GIAKINAIIYQIDKSSLSDASKAPIYAELKALRAYYYYNLLDAFGNVPIVTNFEDTSLPS
CCEEEEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
NSTRKQVYDFVEKEFLDAIPYLSSNVVYSKMTKNVAYSILARLYLNSEAFIGTPRWQDCI
CCHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
NMCQKVSGYTLTPDFFTNFSTENEKSPEIIFAIPYDSKAGTVGNYMNSMSCHYLHRLTMS
HHHHHHCCCEECHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHEEEEEEEE
VSGNDYPWSANGMCAQPGVYSSFADTDKRKKCMVAGDQINMATGTVIMMDNGEPLTYTEE
ECCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCEEEEEECEEEEEECCCCCEEHHH
VTSVANAKDNQGVRLGKYEMKAGETWERDHDLVLIRYAEILMMQAECYVRLGSPDLAKPF
HHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHEEEEEEEECCCHHHHHH
VQQITSRAGAEMPAVIDLDFIDKELLREFTFEGRRRTDNIRFGTFFNPWWEKGTTEKYRA
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCCCEEE
IFPIPSTVLTTNKNLVQNPGYPVN
EECCCCEEEECCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA