| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302062
Identifier: 146302062
GI number: 146302062
Start: 5225256
End: 5227274
Strand: Reverse
Name: 146302062
Synonym: Fjoh_4326
Alternate gene names: NA
Gene position: 5227274-5225256 (Counterclockwise)
Preceding gene: 146302063
Following gene: 146302060
Centisome position: 85.74
GC content: 37.49
Gene sequence:
>2019_bases ATGAGAAACATAAGATATAGATACTGTATAATCGCCTTAGCTTCAATGCTTCTTTTTGCCTGCAGTACTAAAAAAACATA TAAAATCAACTCGCCGGGAAAAGTCACCGAATTAATTTTTGAATTAACACCTTCAGGACAGCCTCAATACAGCTTTTCTA AAAACGGAAAATCGGTTATAGAACCCTCTTTGTTAGGATTTGAATTTCAGGGAATTCAAAAAATGACCGACGGTTTTGAA GTCGTTTCTACCGAAGAAAAATCTGCAGATGAAACCTGGGAACAGCCTTGGGGAGAATTCAAAAAAGTCCGCGATCACCA CAACGAATTGATTGTTCATTTAAAAGAATCAAAAGGAGAAGAGCGTTTAGTAGATATTATTTTCAGAGTTTTTGATGATG GTTTAGGATTTCGATATGAATTTCCAAAACAGCCTAATTTAGGTAAAGTGAAAATCTCGAATGAAATCACGCAATTTACT TTTAAAGATAACAACGACGTTTGGTGGATTCCGGTACACCGCGAAAATAGTTATTACGAAAGTGAATACCGTAAAACTCC TATAAGTAAAACCGATACAATTAATACGCCGGCTACTTTTGAAACAAAAAATAAATTGTATGTAGCAATTCATGAGGCTA ATTTGACTGATTTTGCTTCGATGACACTTTTAAAAACAAGCGACAAACAATACAAAAGTGATTTAGTGCCGTGGGCAGAC GGAGTAAAAGTATATGCTGAAACTCCATTTAAAACACCTTGGAGAACAGTTGTTGTGGGTGAGAATCCGGGAGAGGTTGC AACTTCCACGATCATGCTGAATTTAAATGAACCTTCAAAAATTGAAGATCTTTCCTGGATTACACCTTCTAAATATATTG GAATCTGGTGGGGAATGCACTTAGAAAAATTCACTTGGGGACAAGGGCCTAAACATGGTGCTACAACAAAAAATACAAAA GAATATATTGATTTTGCTGCGAAAAACAATTTTGACGGCGTTCTGGTTGAAGGCTGGAACGAGGGCTGGGACGGCGACTG GACTGCCGACGGAAGTGCATTTAGTTTTGTAAAAGCATATCCTGATTTTAATCTGGAAGAAATTACAAAATATGCTGCCA TGAAAAATGTTCGTTTAATAGGACATCACGAAACAGCAGGTGCTTCTAAACATTATGAAAGCCAATTAGAAGATGCTTTT AAATTGTATCAAAAAATGGGCGTGAATTCAGTTAAAACAGGTTATGTAAACAAATATTTGGATAAAAAAGAATGGCATGA CAGCCAGTATGCATCTCGTCATTACAGAAAAGTGATCGAAACTGCGGCCAAATATCACATCATGATCGATAATCACGAGC CAATAAAAGGAACAGGATTACAGCGTACCTATCCAAACTTTATGTCTCAGGAAGGCGGAAGAGGGCAGGAATACAACGCA TGGTCTGTAGACGGCGGAAACACGCCGCAGCATTTAACAACTTTACCGTTTACAAGAATGCTTTCAGGTCCGTTTGATTA CACTCCGGGGAATTTCAATTTTGATTACAAAACACCTTCTGGAGCAAGAGTACAGACAACCCTGGCAAACCAATTAGCAT TGTATGTTATCATTTTCAGCCCATTGCAAATGGCATCAGATTTACCGGAAAATTATGTTGGCAAACCTGAATTTCAGTTC ATAAAAGATGTGCCTTGCACCTGGTCTGATACTAAAGTTTTAGATTCTAAAATTGGAGAATACACTACAATTGCGCGTAA AGACTGGGATGAGAAAAACTGGTATTTAGGATCAATTACCAACCAAAATGCAAGAGATCTAAATGTTGCTTTATCATTCT TAGATGCCGGAAAAGAATACGAAGCCGAAATCTATGCTGACGGCAGCGGAGCGAATTACAAAACAAATCCATACCCGGTT GCAATCTCTAAGCAAAAAGTAAATAACAAAAGCGTTTTAAACATCAAATTGGCAGCTGGAGGAGGAACAGCTATAAAATT TACTCCAATCGAGAAATAA
Upstream 100 bases:
>100_bases CTGGATCAGGCTTTTAATTATTTTGTTTCAATGCAGCCTGCAAAAGCAAAACAGTTAATAAACGAAATAAAATAAGAGCC GTAATTAATACCAATACATA
Downstream 100 bases:
>100_bases GTAGTTGAGTTTATTTTGAGTTAAGTTAAGTTTAAGTGAATGAACCCGATATCTTGCAAAAGATGTCGGGTTTGTTTTTT TATTTTTTTGTTTCAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MRNIRYRYCIIALASMLLFACSTKKTYKINSPGKVTELIFELTPSGQPQYSFSKNGKSVIEPSLLGFEFQGIQKMTDGFE VVSTEEKSADETWEQPWGEFKKVRDHHNELIVHLKESKGEERLVDIIFRVFDDGLGFRYEFPKQPNLGKVKISNEITQFT FKDNNDVWWIPVHRENSYYESEYRKTPISKTDTINTPATFETKNKLYVAIHEANLTDFASMTLLKTSDKQYKSDLVPWAD GVKVYAETPFKTPWRTVVVGENPGEVATSTIMLNLNEPSKIEDLSWITPSKYIGIWWGMHLEKFTWGQGPKHGATTKNTK EYIDFAAKNNFDGVLVEGWNEGWDGDWTADGSAFSFVKAYPDFNLEEITKYAAMKNVRLIGHHETAGASKHYESQLEDAF KLYQKMGVNSVKTGYVNKYLDKKEWHDSQYASRHYRKVIETAAKYHIMIDNHEPIKGTGLQRTYPNFMSQEGGRGQEYNA WSVDGGNTPQHLTTLPFTRMLSGPFDYTPGNFNFDYKTPSGARVQTTLANQLALYVIIFSPLQMASDLPENYVGKPEFQF IKDVPCTWSDTKVLDSKIGEYTTIARKDWDEKNWYLGSITNQNARDLNVALSFLDAGKEYEAEIYADGSGANYKTNPYPV AISKQKVNNKSVLNIKLAAGGGTAIKFTPIEK
Sequences:
>Translated_672_residues MRNIRYRYCIIALASMLLFACSTKKTYKINSPGKVTELIFELTPSGQPQYSFSKNGKSVIEPSLLGFEFQGIQKMTDGFE VVSTEEKSADETWEQPWGEFKKVRDHHNELIVHLKESKGEERLVDIIFRVFDDGLGFRYEFPKQPNLGKVKISNEITQFT FKDNNDVWWIPVHRENSYYESEYRKTPISKTDTINTPATFETKNKLYVAIHEANLTDFASMTLLKTSDKQYKSDLVPWAD GVKVYAETPFKTPWRTVVVGENPGEVATSTIMLNLNEPSKIEDLSWITPSKYIGIWWGMHLEKFTWGQGPKHGATTKNTK EYIDFAAKNNFDGVLVEGWNEGWDGDWTADGSAFSFVKAYPDFNLEEITKYAAMKNVRLIGHHETAGASKHYESQLEDAF KLYQKMGVNSVKTGYVNKYLDKKEWHDSQYASRHYRKVIETAAKYHIMIDNHEPIKGTGLQRTYPNFMSQEGGRGQEYNA WSVDGGNTPQHLTTLPFTRMLSGPFDYTPGNFNFDYKTPSGARVQTTLANQLALYVIIFSPLQMASDLPENYVGKPEFQF IKDVPCTWSDTKVLDSKIGEYTTIARKDWDEKNWYLGSITNQNARDLNVALSFLDAGKEYEAEIYADGSGANYKTNPYPV AISKQKVNNKSVLNIKLAAGGGTAIKFTPIEK >Mature_672_residues MRNIRYRYCIIALASMLLFACSTKKTYKINSPGKVTELIFELTPSGQPQYSFSKNGKSVIEPSLLGFEFQGIQKMTDGFE VVSTEEKSADETWEQPWGEFKKVRDHHNELIVHLKESKGEERLVDIIFRVFDDGLGFRYEFPKQPNLGKVKISNEITQFT FKDNNDVWWIPVHRENSYYESEYRKTPISKTDTINTPATFETKNKLYVAIHEANLTDFASMTLLKTSDKQYKSDLVPWAD GVKVYAETPFKTPWRTVVVGENPGEVATSTIMLNLNEPSKIEDLSWITPSKYIGIWWGMHLEKFTWGQGPKHGATTKNTK EYIDFAAKNNFDGVLVEGWNEGWDGDWTADGSAFSFVKAYPDFNLEEITKYAAMKNVRLIGHHETAGASKHYESQLEDAF KLYQKMGVNSVKTGYVNKYLDKKEWHDSQYASRHYRKVIETAAKYHIMIDNHEPIKGTGLQRTYPNFMSQEGGRGQEYNA WSVDGGNTPQHLTTLPFTRMLSGPFDYTPGNFNFDYKTPSGARVQTTLANQLALYVIIFSPLQMASDLPENYVGKPEFQF IKDVPCTWSDTKVLDSKIGEYTTIARKDWDEKNWYLGSITNQNARDLNVALSFLDAGKEYEAEIYADGSGANYKTNPYPV AISKQKVNNKSVLNIKLAAGGGTAIKFTPIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76562; Mature: 76562
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIRYRYCIIALASMLLFACSTKKTYKINSPGKVTELIFELTPSGQPQYSFSKNGKSVI CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHEEEEEEECCCCCCCCCCCCCCCCCC EPSLLGFEFQGIQKMTDGFEVVSTEEKSADETWEQPWGEFKKVRDHHNELIVHLKESKGE CCCCCCEEHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH ERLVDIIFRVFDDGLGFRYEFPKQPNLGKVKISNEITQFTFKDNNDVWWIPVHRENSYYE HHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCEEEEEEECCCCCHH SEYRKTPISKTDTINTPATFETKNKLYVAIHEANLTDFASMTLLKTSDKQYKSDLVPWAD HHHHCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCHHHEEEEECCCHHHHHCCCCCCC GVKVYAETPFKTPWRTVVVGENPGEVATSTIMLNLNEPSKIEDLSWITPSKYIGIWWGMH CEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECE LEKFTWGQGPKHGATTKNTKEYIDFAAKNNFDGVLVEGWNEGWDGDWTADGSAFSFVKAY EEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC PDFNLEEITKYAAMKNVRLIGHHETAGASKHYESQLEDAFKLYQKMGVNSVKTGYVNKYL CCCCHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DKKEWHDSQYASRHYRKVIETAAKYHIMIDNHEPIKGTGLQRTYPNFMSQEGGRGQEYNA CHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCE WSVDGGNTPQHLTTLPFTRMLSGPFDYTPGNFNFDYKTPSGARVQTTLANQLALYVIIFS EECCCCCCCCCEEECCHHHHHCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHEEEEEEEC PLQMASDLPENYVGKPEFQFIKDVPCTWSDTKVLDSKIGEYTTIARKDWDEKNWYLGSIT HHHHHHCCCHHHCCCCCHHHHHCCCCCCCCCHHHHHHCCCEEEEHHCCCCCCCEEEEECC NQNARDLNVALSFLDAGKEYEAEIYADGSGANYKTNPYPVAISKQKVNNKSVLNIKLAAG CCCCCHHHHEEEEHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEC GGTAIKFTPIEK CCCEEEEECCCC >Mature Secondary Structure MRNIRYRYCIIALASMLLFACSTKKTYKINSPGKVTELIFELTPSGQPQYSFSKNGKSVI CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHEEEEEEECCCCCCCCCCCCCCCCCC EPSLLGFEFQGIQKMTDGFEVVSTEEKSADETWEQPWGEFKKVRDHHNELIVHLKESKGE CCCCCCEEHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH ERLVDIIFRVFDDGLGFRYEFPKQPNLGKVKISNEITQFTFKDNNDVWWIPVHRENSYYE HHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCEEEEEEECCCCCHH SEYRKTPISKTDTINTPATFETKNKLYVAIHEANLTDFASMTLLKTSDKQYKSDLVPWAD HHHHCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCHHHEEEEECCCHHHHHCCCCCCC GVKVYAETPFKTPWRTVVVGENPGEVATSTIMLNLNEPSKIEDLSWITPSKYIGIWWGMH CEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECE LEKFTWGQGPKHGATTKNTKEYIDFAAKNNFDGVLVEGWNEGWDGDWTADGSAFSFVKAY EEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC PDFNLEEITKYAAMKNVRLIGHHETAGASKHYESQLEDAFKLYQKMGVNSVKTGYVNKYL CCCCHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DKKEWHDSQYASRHYRKVIETAAKYHIMIDNHEPIKGTGLQRTYPNFMSQEGGRGQEYNA CHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCE WSVDGGNTPQHLTTLPFTRMLSGPFDYTPGNFNFDYKTPSGARVQTTLANQLALYVIIFS EECCCCCCCCCEEECCHHHHHCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHEEEEEEEC PLQMASDLPENYVGKPEFQFIKDVPCTWSDTKVLDSKIGEYTTIARKDWDEKNWYLGSIT HHHHHHCCCHHHCCCCCHHHHHCCCCCCCCCHHHHHHCCCEEEEHHCCCCCCCEEEEECC NQNARDLNVALSFLDAGKEYEAEIYADGSGANYKTNPYPVAISKQKVNNKSVLNIKLAAG CCCCCHHHHEEEEHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEC GGTAIKFTPIEK CCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA