| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yjgM [C]
Identifier: 146302056
GI number: 146302056
Start: 5218688
End: 5219725
Strand: Reverse
Name: yjgM [C]
Synonym: Fjoh_4320
Alternate gene names: 146302056
Gene position: 5219725-5218688 (Counterclockwise)
Preceding gene: 146302057
Following gene: 146302046
Centisome position: 85.61
GC content: 33.82
Gene sequence:
>1038_bases ATGTTCCTTTGTAACTTTGCACCTAAAAAATCTTTGCAAAAAAGATTTTTTTTATACATTTGCATAACTAGTTATATAAT TAATTATAATATGGAATTTTTTGACAAAGTAGGCAAAGCGGCACTAGGAAGCCGTTTGCGATTAATGACAGCTGTTATTA CAGATGATGCTTCTAAAATTTATGAATTATACGGTGTAGATTTTGTGCCGAAGTGGTTTCCGGTTTTTTATATTTTAACA GAAGAAAGAGAACTTACCATTACCGAAATTGCAAATGAAATTGGACATTCTCAGCCTTCTGTAAGTAAAATTATTCAGGA AATGAGTAACGCAGGAATTGTAAAAGAAAGTAAAACGGATGATAAGCGAAAAAACAATGTTGTTTTGACTGAGAAAGGGG TTTTGCTTTCGCAGAAAATACAGCAGCAATTAAAAGATATTGATGTAGCAATCGACGGCATTATATCTGAATCGAAACAC AATCTTTGGGCAGCGCTTGAGGAATGGGAATTTTTATTGGAACAGAAATCAATGTTCAAACGTGTAAGCGATCAAAAAAA ACTTCGCGAAAGCAAAGATGTTGAAATAGTAGAATATAAACCAGAATATCAGGAAGCGTTTCGGGCTTTGAATGTAGAAT GGATTTCGAATTATTTTGAAATGGAAGAAGCAGATTATAAAGCACTCGATAATCCTGAAGAATATATCTTAAATAAAGGC GGAAAAATTCTGGTGGCATTATATCAAAACGAACCCGTAGGTGTCTGCGCTCTTATCAAAATGAACAATCCCGATTATGA TTTTGAAATGGCAAAAATGGCAGTTTCTCCAAAAGCGCAGGGTAAAAATATCGGCTGGCTTTTAGGTCAGGGAATCGTTA AAACCGCCAGAGAATTAGGCGCAAAAAAGATTTATCTGGAAAGCAACACAATTTTAAAACCAGCTATAAACTTATATTAC AAACTAGGTTTTGAAAAAGTCTTTGGTCTTGAAACGCCTTATAAACGATGTAATATACAGATGGAGTTAGTTCTTTAA
Upstream 100 bases:
>100_bases TAGATCTATCAAATTTTAAGTAAAAACTTAAATGAGGGCGATTTAGAATCTTATTTTTTTATAAAAAATTCAAGTAAAAG AGTAAAAAAACTTTGTCTCT
Downstream 100 bases:
>100_bases AAGTGGCAAAGTCACAGAGAGACAAAGGTTCAAAGTTTTAAATCTTTGTTTCTTTGTCTCTCTGTGACTTTGATCCTAAA AACTGTCAAACAGTTTTCAA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase; GNAT Family Acetyltransferase; Transcriptional Regulator; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; Transcriptional Regulator MarR Family; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MFLCNFAPKKSLQKRFFLYICITSYIINYNMEFFDKVGKAALGSRLRLMTAVITDDASKIYELYGVDFVPKWFPVFYILT EERELTITEIANEIGHSQPSVSKIIQEMSNAGIVKESKTDDKRKNNVVLTEKGVLLSQKIQQQLKDIDVAIDGIISESKH NLWAALEEWEFLLEQKSMFKRVSDQKKLRESKDVEIVEYKPEYQEAFRALNVEWISNYFEMEEADYKALDNPEEYILNKG GKILVALYQNEPVGVCALIKMNNPDYDFEMAKMAVSPKAQGKNIGWLLGQGIVKTARELGAKKIYLESNTILKPAINLYY KLGFEKVFGLETPYKRCNIQMELVL
Sequences:
>Translated_345_residues MFLCNFAPKKSLQKRFFLYICITSYIINYNMEFFDKVGKAALGSRLRLMTAVITDDASKIYELYGVDFVPKWFPVFYILT EERELTITEIANEIGHSQPSVSKIIQEMSNAGIVKESKTDDKRKNNVVLTEKGVLLSQKIQQQLKDIDVAIDGIISESKH NLWAALEEWEFLLEQKSMFKRVSDQKKLRESKDVEIVEYKPEYQEAFRALNVEWISNYFEMEEADYKALDNPEEYILNKG GKILVALYQNEPVGVCALIKMNNPDYDFEMAKMAVSPKAQGKNIGWLLGQGIVKTARELGAKKIYLESNTILKPAINLYY KLGFEKVFGLETPYKRCNIQMELVL >Mature_345_residues MFLCNFAPKKSLQKRFFLYICITSYIINYNMEFFDKVGKAALGSRLRLMTAVITDDASKIYELYGVDFVPKWFPVFYILT EERELTITEIANEIGHSQPSVSKIIQEMSNAGIVKESKTDDKRKNNVVLTEKGVLLSQKIQQQLKDIDVAIDGIISESKH NLWAALEEWEFLLEQKSMFKRVSDQKKLRESKDVEIVEYKPEYQEAFRALNVEWISNYFEMEEADYKALDNPEEYILNKG GKILVALYQNEPVGVCALIKMNNPDYDFEMAKMAVSPKAQGKNIGWLLGQGIVKTARELGAKKIYLESNTILKPAINLYY KLGFEKVFGLETPYKRCNIQMELVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 39794; Mature: 39794
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLCNFAPKKSLQKRFFLYICITSYIINYNMEFFDKVGKAALGSRLRLMTAVITDDASKI CEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHH YELYGVDFVPKWFPVFYILTEERELTITEIANEIGHSQPSVSKIIQEMSNAGIVKESKTD HHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCC DKRKNNVVLTEKGVLLSQKIQQQLKDIDVAIDGIISESKHNLWAALEEWEFLLEQKSMFK CHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RVSDQKKLRESKDVEIVEYKPEYQEAFRALNVEWISNYFEMEEADYKALDNPEEYILNKG HHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHCCC GKILVALYQNEPVGVCALIKMNNPDYDFEMAKMAVSPKAQGKNIGWLLGQGIVKTARELG CEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCC AKKIYLESNTILKPAINLYYKLGFEKVFGLETPYKRCNIQMELVL CEEEEEECCCCHHHHHHHHHHHCHHHHHCCCCCHHHCCEEEEEEC >Mature Secondary Structure MFLCNFAPKKSLQKRFFLYICITSYIINYNMEFFDKVGKAALGSRLRLMTAVITDDASKI CEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHH YELYGVDFVPKWFPVFYILTEERELTITEIANEIGHSQPSVSKIIQEMSNAGIVKESKTD HHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCC DKRKNNVVLTEKGVLLSQKIQQQLKDIDVAIDGIISESKHNLWAALEEWEFLLEQKSMFK CHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RVSDQKKLRESKDVEIVEYKPEYQEAFRALNVEWISNYFEMEEADYKALDNPEEYILNKG HHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHCCC GKILVALYQNEPVGVCALIKMNNPDYDFEMAKMAVSPKAQGKNIGWLLGQGIVKTARELG CEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCC AKKIYLESNTILKPAINLYYKLGFEKVFGLETPYKRCNIQMELVL CEEEEEECCCCHHHHHHHHHHHCHHHHHCCCCCHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA