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The map label for this gene is yrbE [C]

Identifier: 146302050

GI number: 146302050

Start: 5211653

End: 5212411

Strand: Direct

Name: yrbE [C]

Synonym: Fjoh_4314

Alternate gene names: 146302050

Gene position: 5211653-5212411 (Clockwise)

Preceding gene: 146302049

Following gene: 146302051

Centisome position: 85.48

GC content: 35.84

Gene sequence:

>759_bases
TTGATTCTCAGCTTAAAAAATACATTCGCACAAATTGGTAATGCTGCATTATTTGCCAATAGGTTTTTTAAGGAGGTTTT
TATTCCCCCTTATGAGACAAAAGAGTTTTTGAAACAATGTTATTTAATTGGTTACAAATCACTCCCATTAGTAGCCATAA
CAGGTTTTATTATGGGATTGGTATTAACAATTCAGTCAAGACCTACATTAGTAACATTTGGAGCCGAAAGCTGGCTTCCA
GGAATGGTGGCACTTTCTTTAATTAGAGAAATTGCTCCTGTCATTACAGCCTTAATCTGCGCCGGAAAAATCTCTTCGGG
AATTGGTGCCGAACTGGGTTCGATGAAAGTAACAGAACAAATAGACGCTATGGAAGTTTCTGCCATCAATCCTTATAATT
ATTTAGTCGTAACAAGAATTTTAGCCTGTACCTTAATGGTGCCTATATTAGTAATTTTTGCAGATGCTGTTGGTATTATA
GGCGGTTATGCCGGAATAAATATTCATGGTGATGTTAATTTCTACCGATATCTAACCCAGATTATTCAATCATTAGAATT
TTCAGATCTGATTCCCGCAACGATAAAAACATTCTTCTTTGGCTATTTCATAGGAATGATTGGCTGTTATAAAGGATTTA
ATGCTGCAAACGGAACAGAAAGTGTAGGACACGCTGCAAACTCGGCAGTAGTTACAGCCTCTCTCAGCATATTTATTATT
GATATGGTAGCCGTGCAATTAACTGATTTAATTTATTAA

Upstream 100 bases:

>100_bases
TTAACAAGTATAGAGGTAACTTTCATATATAATTTAAAAAGTGGAAAAAACTGTTAAATATTTGATTTTGAAACTACAAC
TAACTTAAAAACAAAACATT

Downstream 100 bases:

>100_bases
GATGATTAAAGAAGAAAAAAATACCGAACCAAAATCAAAAGATAAAAAGCAGACTCCAATTATTGAAATTAAGAACCTGC
ATAAAACTTTTGGCGAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGLVLTIQSRPTLVTFGAESWLP
GMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGII
GGYAGINIHGDVNFYRYLTQIIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII
DMVAVQLTDLIY

Sequences:

>Translated_252_residues
MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGLVLTIQSRPTLVTFGAESWLP
GMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGII
GGYAGINIHGDVNFYRYLTQIIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII
DMVAVQLTDLIY
>Mature_252_residues
MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGLVLTIQSRPTLVTFGAESWLP
GMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGII
GGYAGINIHGDVNFYRYLTQIIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII
DMVAVQLTDLIY

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=262, Percent_Identity=30.5343511450382, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27299; Mature: 27299

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGL
CEEECHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VLTIQSRPTLVTFGAESWLPGMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQ
HHHHCCCCCEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHH
IDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQ
HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH
IIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII
HHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
DMVAVQLTDLIY
HHHHHHHHHHCC
>Mature Secondary Structure
MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGL
CEEECHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VLTIQSRPTLVTFGAESWLPGMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQ
HHHHCCCCCEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHH
IDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQ
HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH
IIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII
HHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
DMVAVQLTDLIY
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA