BacMap

Definition	Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession	NC_009441
Length	6,096,872

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The map label for this gene is fabG [H]

Identifier: 146302016

GI number: 146302016

Start: 5170728

End: 5171492

Strand: Direct

Name: fabG [H]

Synonym: Fjoh_4280

Alternate gene names: 146302016

Gene position: 5170728-5171492 (Clockwise)

Preceding gene: 146302015

Following gene: 146302020

Centisome position: 84.81

GC content: 37.65

Gene sequence:

>765_bases
ATGGCAGTAAATACAAAAACAGCTCTGGTTACAGGAGGAAGCAGAGGTTTAGGAAAAAATATGGCAATTGCGATTGCAAA
GAAAGGAATCGACGTAATTATTACGTACAACAGCAAAAAAGAAGAAGCTGATTTAGTAGTAAAAGAAATCGAAAGTTTAG
GTCAAAAAGCGGCTGCACTTCAATTAAATGTTGCTGAATCAAATACTTTTGATGCTTTCTACAAAGAAGTAGAATCAACT
TTAAAAAACACTTTTAAAACAGACAAATTTGACTTTTTAATCAACAATGCCGGAATTGGAATTCACAATTCTTTCATTGG
AACAACTGAAGCTGAATTTGATCAATTAACTAACATTCAGTTTAAAGGTCCGTTCTTCTTAACTCAAAAAGGTTTAAACG
TAATGAATGATGGCGGCGGAATCGTAAATATTTCTACAGGTTTAGCCAGATTCTCATTTCCGGGTTATGCTGCTTATGCT
TCTATGAAAGGTGCCATTGAAACTTTAACTAAATATCAGGCAAAAGAACTTGGAGCAAGAAAAATCAGAGTTAATGTCGT
GGCTCCAGGCGCTATCGAAACAGATTTTGGAGGCGGAGTGGTTCGCGACAATGAGCAGATGAACCAGCAGATTGCTTCAG
TAACTGCTCTTGGAAGAGTTGGTTTACCAGATGATATTGGCGGTGTTGTTGCCTTTTTATGTACCGAAGAGGCTCGCTGG
ATAAACGCACAAAGAATCGAAGCTTCTGGGGGAATGATGCTTTAA

Upstream 100 bases:

>100_bases
AATAATCATATCATAAAGGTCTTCGACTTCGCTCAGACTGACAGAAAAACAACAACAAATAATTCACAATTAACAACTCA
CAATTCATAATTAAATAAAT

Downstream 100 bases:

>100_bases
TGAATGGTTTATGGTTAATGGTTAATGGTTGATGGTTTATTGTTGATGGTTGATAGTTGATGTTTTATTGCTAATGGTTA
ATGGTTAATTGTTTATAGTT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAVNTKTALVTGGSRGLGKNMAIAIAKKGIDVIITYNSKKEEADLVVKEIESLGQKAAALQLNVAESNTFDAFYKEVEST
LKNTFKTDKFDFLINNAGIGIHNSFIGTTEAEFDQLTNIQFKGPFFLTQKGLNVMNDGGGIVNISTGLARFSFPGYAAYA
SMKGAIETLTKYQAKELGARKIRVNVVAPGAIETDFGGGVVRDNEQMNQQIASVTALGRVGLPDDIGGVVAFLCTEEARW
INAQRIEASGGMML

Sequences:

>Translated_254_residues
MAVNTKTALVTGGSRGLGKNMAIAIAKKGIDVIITYNSKKEEADLVVKEIESLGQKAAALQLNVAESNTFDAFYKEVEST
LKNTFKTDKFDFLINNAGIGIHNSFIGTTEAEFDQLTNIQFKGPFFLTQKGLNVMNDGGGIVNISTGLARFSFPGYAAYA
SMKGAIETLTKYQAKELGARKIRVNVVAPGAIETDFGGGVVRDNEQMNQQIASVTALGRVGLPDDIGGVVAFLCTEEARW
INAQRIEASGGMML
>Mature_253_residues
AVNTKTALVTGGSRGLGKNMAIAIAKKGIDVIITYNSKKEEADLVVKEIESLGQKAAALQLNVAESNTFDAFYKEVESTL
KNTFKTDKFDFLINNAGIGIHNSFIGTTEAEFDQLTNIQFKGPFFLTQKGLNVMNDGGGIVNISTGLARFSFPGYAAYAS
MKGAIETLTKYQAKELGARKIRVNVVAPGAIETDFGGGVVRDNEQMNQQIASVTALGRVGLPDDIGGVVAFLCTEEARWI
NAQRIEASGGMML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=31.2252964426877, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=29.1497975708502, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI15277342, Length=262, Percent_Identity=26.7175572519084, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=27.3809523809524, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=24.4979919678715, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI40254992, Length=252, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=29.0155440414508, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=25.6603773584906, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI209862901, Length=202, Percent_Identity=22.7722772277228, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI19923983, Length=202, Percent_Identity=22.7722772277228, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4503817, Length=200, Percent_Identity=27.5, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=30.9803921568627, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI2367175, Length=254, Percent_Identity=30.3149606299213, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=30.6772908366534, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=27.4900398406374, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=30.7392996108949, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=27.5590551181102, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=30.7053941908714, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=32.4110671936759, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=28.2868525896414, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=28.4046692607004, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786812, Length=266, Percent_Identity=24.812030075188, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787545, Length=253, Percent_Identity=24.1106719367589, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786701, Length=229, Percent_Identity=27.9475982532751, Blast_Score=68, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=31.1023622047244, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=29.5454545454545, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=28.8537549407115, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=30.3030303030303, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=28.1746031746032, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=258, Percent_Identity=28.6821705426357, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=29.7709923664122, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=30.5970149253731, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=30.4511278195489, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=30.4182509505703, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=30.6818181818182, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=25.4032258064516, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17531453, Length=275, Percent_Identity=27.6363636363636, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=30.5970149253731, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=26.1538461538462, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=263, Percent_Identity=23.574144486692, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=29.4776119402985, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=30.188679245283, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=272, Percent_Identity=30.5147058823529, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=264, Percent_Identity=26.8939393939394, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=23.7354085603113, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=270, Percent_Identity=28.8888888888889, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=28.3088235294118, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=27.8625954198473, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=28.6259541984733, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=239, Percent_Identity=26.3598326359833, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=271, Percent_Identity=29.1512915129151, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=27.5735294117647, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=26.3565891472868, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=255, Percent_Identity=28.6274509803922, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=30.9803921568627, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=30.0395256916996, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=30.4878048780488, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=31.8897637795276, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=30.8300395256917, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=32.4110671936759, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=27.734375, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24644337, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21358495, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI18859837, Length=256, Percent_Identity=26.953125, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27187; Mature: 27056

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNTKTALVTGGSRGLGKNMAIAIAKKGIDVIITYNSKKEEADLVVKEIESLGQKAAAL
CCCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCHHEEE
QLNVAESNTFDAFYKEVESTLKNTFKTDKFDFLINNAGIGIHNSFIGTTEAEFDQLTNIQ
EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHCCEE
FKGPFFLTQKGLNVMNDGGGIVNISTGLARFSFPGYAAYASMKGAIETLTKYQAKELGAR
ECCCEEEECCCCCEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
KIRVNVVAPGAIETDFGGGVVRDNEQMNQQIASVTALGRVGLPDDIGGVVAFLCTEEARW
EEEEEEEECCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCHHH
INAQRIEASGGMML
CCCEEEECCCCCCC
>Mature Secondary Structure 
AVNTKTALVTGGSRGLGKNMAIAIAKKGIDVIITYNSKKEEADLVVKEIESLGQKAAAL
CCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCHHEEE
QLNVAESNTFDAFYKEVESTLKNTFKTDKFDFLINNAGIGIHNSFIGTTEAEFDQLTNIQ
EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHCCEE
FKGPFFLTQKGLNVMNDGGGIVNISTGLARFSFPGYAAYASMKGAIETLTKYQAKELGAR
ECCCEEEECCCCCEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
KIRVNVVAPGAIETDFGGGVVRDNEQMNQQIASVTALGRVGLPDDIGGVVAFLCTEEARW
EEEEEEEECCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCHHH
INAQRIEASGGMML
CCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]