| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302008
Identifier: 146302008
GI number: 146302008
Start: 5161762
End: 5162076
Strand: Direct
Name: 146302008
Synonym: Fjoh_4272
Alternate gene names: NA
Gene position: 5161762-5162076 (Clockwise)
Preceding gene: 146302007
Following gene: 146302009
Centisome position: 84.66
GC content: 38.1
Gene sequence:
>315_bases ATGAAAACACTTGAATTCTTATTACTCGGAAAAAACGAAGCGATCCTGGCCATTTTACTTCGCCTTGTAAATGCTTATGA AGACTGGAACGCAGTCGCATTTAGCAGCGAAACAGAAGCTCAGGACTATTTTCAGAATCACAAAATCGACGTTGTTCTAT TGAGCTCCGGAATCGAAGACCATGTCGAAAAAGAGTTTACTTTATTTTGCTTAAAACAACAGCCAGACGTAGAAGTAATT GAACATTTTGGAGGCGGAAGCGGATTATTAAAATCAGAAATTCTCCACCGTTTACATCTAAAAGGAAAAATCTAG
Upstream 100 bases:
>100_bases ATATAAATGACAAGTTCTGCGAAACTGAAATTTCAAAGTAAAAAAAACTTAGAACCTCAGTCACGAAGCTTGGGATAGAA TCTTAGAAACTAAAGAAAAA
Downstream 100 bases:
>100_bases GCGCCGCATTTTTCTCTTTTAAAAATTCATTAAAAGCTTAAAGAATAATCTATTAACGAATATTCGTCGCTAAATCGACG ATATATCGTCAGGATCACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MKTLEFLLLGKNEAILAILLRLVNAYEDWNAVAFSSETEAQDYFQNHKIDVVLLSSGIEDHVEKEFTLFCLKQQPDVEVI EHFGGGSGLLKSEILHRLHLKGKI
Sequences:
>Translated_104_residues MKTLEFLLLGKNEAILAILLRLVNAYEDWNAVAFSSETEAQDYFQNHKIDVVLLSSGIEDHVEKEFTLFCLKQQPDVEVI EHFGGGSGLLKSEILHRLHLKGKI >Mature_104_residues MKTLEFLLLGKNEAILAILLRLVNAYEDWNAVAFSSETEAQDYFQNHKIDVVLLSSGIEDHVEKEFTLFCLKQQPDVEVI EHFGGGSGLLKSEILHRLHLKGKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11795; Mature: 11795
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLEFLLLGKNEAILAILLRLVNAYEDWNAVAFSSETEAQDYFQNHKIDVVLLSSGIED CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCEEEEEECCCCHH HVEKEFTLFCLKQQPDVEVIEHFGGGSGLLKSEILHRLHLKGKI HHHHHEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTLEFLLLGKNEAILAILLRLVNAYEDWNAVAFSSETEAQDYFQNHKIDVVLLSSGIED CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCEEEEEECCCCHH HVEKEFTLFCLKQQPDVEVIEHFGGGSGLLKSEILHRLHLKGKI HHHHHEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA