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The map label for this gene is ycaC [H]

Identifier: 146302009

GI number: 146302009

Start: 5162304

End: 5162993

Strand: Direct

Name: ycaC [H]

Synonym: Fjoh_4273

Alternate gene names: 146302009

Gene position: 5162304-5162993 (Clockwise)

Preceding gene: 146302008

Following gene: 146302010

Centisome position: 84.67

GC content: 38.99

Gene sequence:

>690_bases
ATGAAAAAATTAATCCTTACAGCAGTTTTATCTTTAGTAACTTTTATCGGATTCGCTCAAAAACCAAGTCCGGCGCAGTT
AGATCCAACCAACCATACTTTAGTTTTAATCGATTACGAAAGCCAGATGGCCTTTGCAGTAAACAACATTCCAATCGATC
AGCTTAGAAACAACACTGCTTTAGTAGCAGGCGCATCAAAAATATTCAAAGTTCCAACTATTGTAACAACAGTAGCCGAA
AAATCGTTCAGCGGACCCGTTTTTAAAGAAATTGAAGAATTCTATCCACAAAAAACATCAAACTATATCGACCGTACTTC
AATGAATACCTGGGAAGACATTCCGGCTCACAAAGCTATAGTTGCAAAAGGTAAAAAGAAAATCGTTCTTGGCGGTTTAT
GGACAAGTGTTTGTATCGTAGGGCCAGCTTTATCAGCAATCAACGAAGGATATGATGTTTATGTAATTACAGATGCAAGC
GGCGACATTTCTAAAGAAGCTCACGAAATGGCTGTAACCCGTATGGTTCAGGCTGGTGCGCACCCAATTACTTCATTACA
GTATTTATTAGAATTACAACGTGACTGGGCTCGTCAGGAAACTTATGTTCCTGTGACTGATTTAGTTAAAAAATACGGCG
GCGCTTATGGTGTAGGTGTTCAATACGCTCACGAAATGTTGAAACACTAA

Upstream 100 bases:

>100_bases
ACAAGACATTAAAAACAAGGCATTTATTTTGAATGCAAAACACTGAAAATCAAATACAAAATATTTTAAAACCTTTATTT
AACAACAAAATCAAATTATC

Downstream 100 bases:

>100_bases
TTTTAGATGGAACACAGATGAAACGGATTCGCTATCGCGAAAAAACGGATAAGAACGGATTTTAAAATTCATAAATAAAA
ACCTGCGCAAATCCGCGTCT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKKLILTAVLSLVTFIGFAQKPSPAQLDPTNHTLVLIDYESQMAFAVNNIPIDQLRNNTALVAGASKIFKVPTIVTTVAE
KSFSGPVFKEIEEFYPQKTSNYIDRTSMNTWEDIPAHKAIVAKGKKKIVLGGLWTSVCIVGPALSAINEGYDVYVITDAS
GDISKEAHEMAVTRMVQAGAHPITSLQYLLELQRDWARQETYVPVTDLVKKYGGAYGVGVQYAHEMLKH

Sequences:

>Translated_229_residues
MKKLILTAVLSLVTFIGFAQKPSPAQLDPTNHTLVLIDYESQMAFAVNNIPIDQLRNNTALVAGASKIFKVPTIVTTVAE
KSFSGPVFKEIEEFYPQKTSNYIDRTSMNTWEDIPAHKAIVAKGKKKIVLGGLWTSVCIVGPALSAINEGYDVYVITDAS
GDISKEAHEMAVTRMVQAGAHPITSLQYLLELQRDWARQETYVPVTDLVKKYGGAYGVGVQYAHEMLKH
>Mature_229_residues
MKKLILTAVLSLVTFIGFAQKPSPAQLDPTNHTLVLIDYESQMAFAVNNIPIDQLRNNTALVAGASKIFKVPTIVTTVAE
KSFSGPVFKEIEEFYPQKTSNYIDRTSMNTWEDIPAHKAIVAKGKKKIVLGGLWTSVCIVGPALSAINEGYDVYVITDAS
GDISKEAHEMAVTRMVQAGAHPITSLQYLLELQRDWARQETYVPVTDLVKKYGGAYGVGVQYAHEMLKH

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=172, Percent_Identity=37.2093023255814, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25229; Mature: 25229

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILTAVLSLVTFIGFAQKPSPAQLDPTNHTLVLIDYESQMAFAVNNIPIDQLRNNTA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHCCCCE
LVAGASKIFKVPTIVTTVAEKSFSGPVFKEIEEFYPQKTSNYIDRTSMNTWEDIPAHKAI
EEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCHHHHCCCCCHHHCCCHHHH
VAKGKKKIVLGGLWTSVCIVGPALSAINEGYDVYVITDASGDISKEAHEMAVTRMVQAGA
HHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
HPITSLQYLLELQRDWARQETYVPVTDLVKKYGGAYGVGVQYAHEMLKH
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKLILTAVLSLVTFIGFAQKPSPAQLDPTNHTLVLIDYESQMAFAVNNIPIDQLRNNTA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHCCCCE
LVAGASKIFKVPTIVTTVAEKSFSGPVFKEIEEFYPQKTSNYIDRTSMNTWEDIPAHKAI
EEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCHHHHCCCCCHHHCCCHHHH
VAKGKKKIVLGGLWTSVCIVGPALSAINEGYDVYVITDASGDISKEAHEMAVTRMVQAGA
HHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
HPITSLQYLLELQRDWARQETYVPVTDLVKKYGGAYGVGVQYAHEMLKH
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]