| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301989
Identifier: 146301989
GI number: 146301989
Start: 5134222
End: 5135178
Strand: Reverse
Name: 146301989
Synonym: Fjoh_4253
Alternate gene names: NA
Gene position: 5135178-5134222 (Counterclockwise)
Preceding gene: 146301990
Following gene: 146301988
Centisome position: 84.23
GC content: 35.01
Gene sequence:
>957_bases ATGCGAAAAATTGTATTCATTTTGTTATGCTTTTCCTGTGCAGTAAATGCGCAGCATACTTACAGTGTCGACACGTCGTA CACCGTAAAAAGCACTTATAATAAATTGATAAAGAAATACCCGGAAATAACAATACCGGAAATTGCCAAAAATGAAAATG TAAACCAGATTAGCGATGTGGTTTATTTTACATCAAAAGACAGAATACTGCATTTGGATGCTTTTGTAAATAATAAGCAA AAACAAAATCTGGCAGTTATCATGATTCATGGCGGCGGATGGCGTTCAGGAAATAAAAATCAGATGAATCTTTTGGCACA GGAAATTGCTTCAAAAGGCTATTCTTGTTTTACAATAGAATATAGGTTGTCGCTCGAAGCAAAATATCCATACGGAGTAT ATGATGTAAAAAATGCGATTCGTTTTATAAAAGATAATGCAAAGAAATTCAAAGTAGATCCAGACAAAATTGCGGTTTTA GGCTGTTCTTCGGGAGGTCAGATGGCAGCTTTGATTGGCACAACAAATGGAATTTCGGCTTTTGATGATCCGTTAAATAA AAGTAAATCATCATCAAAAGTAAATGCTATTATTAATGTAGACGGCGTATTAGCGTTCAGGCATCCCGAATCATCAGAAG GAGAAATGGCATCGTTTTGGCTTGGAGGTTCTTATGAAGAAAAAGAAGAAAACTGGAAGAATGCATCGGCTTTAAGCCAC GCTGATAAAAATACACCTCCAATATTGTTTATAAACAGCAGTATTCCGAGGTTTCATGCAGGAAGAGACGACATGATAAA AATTCTGGATCAATATAAAATTTACAGTGAGGTTCATACAATCGAAAATTCGCCTCACTCATTTTGGTTTTTTCAACCCT GGTTTGACCAGACTATTGATTTTACAACCCATTTTTTAAACAAGATATTTAAATTGCAACACACAAGTCACTATTAA
Upstream 100 bases:
>100_bases TTGTTAGTTTTTTGAGAACATTTGTTTTTTTGAAGAAGTTAAAAAGGAGTTTGGCCAAAGTGCCGGACTCCTTTCTTAAC TAAAAAGTAAATTGATTTTA
Downstream 100 bases:
>100_bases TCAAAAAATCCTTTTAATCTGTGGCAAAACAAAATATAAGAATGAACTATAAAAAAACAGTCTTTGCATTTTTCCTGTTG TACAGCATTTTTACTGTAGG
Product: esterase/lipase-like protein
Products: NA
Alternate protein names: Lipase/Esterase; Esterase/Lipase; Alpha/Beta Hydrolase Domain-Containing Protein; Esterase/Lipase-Like Protein; Esterase; Lipase; Alpha/Beta Hydrolase; Esterase/Lipase/Thioesterase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold Domain Protein; Esterase LipO; Pectinesterase; Esterase/Lipase-Like; Alpha/Beta Hydrolase Fold Protein-3 Domain Protein; Carboxylesterase; Peptidase; Lipoprotein; Membrane-Bound Esterase LipM; Triacylglycerol Lipase; Acetyl Esterase; Alpha/Beta Hydrolase Fold Protein; Esterase-Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Xylanase; Coagulation Factor 5/8 Type Domain Protein; Lipase/Esterase Protein; Carboxylesterase LipQ; Dienelactone Hydrolase; Esterase/Lipase/Thioesterase Family Protein; Esterase LipC; Peptidase S; Para-Nitrobenzyl Esterase; Esterase LipM
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRKIVFILLCFSCAVNAQHTYSVDTSYTVKSTYNKLIKKYPEITIPEIAKNENVNQISDVVYFTSKDRILHLDAFVNNKQ KQNLAVIMIHGGGWRSGNKNQMNLLAQEIASKGYSCFTIEYRLSLEAKYPYGVYDVKNAIRFIKDNAKKFKVDPDKIAVL GCSSGGQMAALIGTTNGISAFDDPLNKSKSSSKVNAIINVDGVLAFRHPESSEGEMASFWLGGSYEEKEENWKNASALSH ADKNTPPILFINSSIPRFHAGRDDMIKILDQYKIYSEVHTIENSPHSFWFFQPWFDQTIDFTTHFLNKIFKLQHTSHY
Sequences:
>Translated_318_residues MRKIVFILLCFSCAVNAQHTYSVDTSYTVKSTYNKLIKKYPEITIPEIAKNENVNQISDVVYFTSKDRILHLDAFVNNKQ KQNLAVIMIHGGGWRSGNKNQMNLLAQEIASKGYSCFTIEYRLSLEAKYPYGVYDVKNAIRFIKDNAKKFKVDPDKIAVL GCSSGGQMAALIGTTNGISAFDDPLNKSKSSSKVNAIINVDGVLAFRHPESSEGEMASFWLGGSYEEKEENWKNASALSH ADKNTPPILFINSSIPRFHAGRDDMIKILDQYKIYSEVHTIENSPHSFWFFQPWFDQTIDFTTHFLNKIFKLQHTSHY >Mature_318_residues MRKIVFILLCFSCAVNAQHTYSVDTSYTVKSTYNKLIKKYPEITIPEIAKNENVNQISDVVYFTSKDRILHLDAFVNNKQ KQNLAVIMIHGGGWRSGNKNQMNLLAQEIASKGYSCFTIEYRLSLEAKYPYGVYDVKNAIRFIKDNAKKFKVDPDKIAVL GCSSGGQMAALIGTTNGISAFDDPLNKSKSSSKVNAIINVDGVLAFRHPESSEGEMASFWLGGSYEEKEENWKNASALSH ADKNTPPILFINSSIPRFHAGRDDMIKILDQYKIYSEVHTIENSPHSFWFFQPWFDQTIDFTTHFLNKIFKLQHTSHY
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71996133, Length=100, Percent_Identity=41, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17540028, Length=99, Percent_Identity=38.3838383838384, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36136; Mature: 36136
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIVFILLCFSCAVNAQHTYSVDTSYTVKSTYNKLIKKYPEITIPEIAKNENVNQISDV CCHHHEEHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHE VYFTSKDRILHLDAFVNNKQKQNLAVIMIHGGGWRSGNKNQMNLLAQEIASKGYSCFTIE EEEECCCCEEEEEHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE YRLSLEAKYPYGVYDVKNAIRFIKDNAKKFKVDPDKIAVLGCSSGGQMAALIGTTNGISA EEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCH FDDPLNKSKSSSKVNAIINVDGVLAFRHPESSEGEMASFWLGGSYEEKEENWKNASALSH HCCCCCCCCCCCCEEEEEEECEEEEEECCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHH ADKNTPPILFINSSIPRFHAGRDDMIKILDQYKIYSEVHTIENSPHSFWFFQPWFDQTID CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH FTTHFLNKIFKLQHTSHY HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRKIVFILLCFSCAVNAQHTYSVDTSYTVKSTYNKLIKKYPEITIPEIAKNENVNQISDV CCHHHEEHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHE VYFTSKDRILHLDAFVNNKQKQNLAVIMIHGGGWRSGNKNQMNLLAQEIASKGYSCFTIE EEEECCCCEEEEEHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE YRLSLEAKYPYGVYDVKNAIRFIKDNAKKFKVDPDKIAVLGCSSGGQMAALIGTTNGISA EEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCH FDDPLNKSKSSSKVNAIINVDGVLAFRHPESSEGEMASFWLGGSYEEKEENWKNASALSH HCCCCCCCCCCCCEEEEEEECEEEEEECCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHH ADKNTPPILFINSSIPRFHAGRDDMIKILDQYKIYSEVHTIENSPHSFWFFQPWFDQTID CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH FTTHFLNKIFKLQHTSHY HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA