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The map label for this gene is 146301990

Identifier: 146301990

GI number: 146301990

Start: 5135283

End: 5136956

Strand: Reverse

Name: 146301990

Synonym: Fjoh_4254

Alternate gene names: NA

Gene position: 5136956-5135283 (Counterclockwise)

Preceding gene: 146301991

Following gene: 146301989

Centisome position: 84.26

GC content: 35.19

Gene sequence:

>1674_bases
ATGAAAAAAATAATAATAATGTTAGGAATGATTGTTACAAGCTTAAGTTCTTGCAGCAATTATATAGAGGAGGAAAGTTT
ATCAAATGTTCCTGCCGATGCAACCTATAAAACCGCATCTGGATTTCAGTTATTAATCAATACAAACTATGCCTGGCTTA
AAAGCATTTATGGAGGAAATCCGTGGTTGTTTGAATCAGGAACAGATATGTATGCAGAAGGAAGAACTCCGGAACCAGCA
GGTTTGAGCCAGTACGCGCTTTTAATTCCTACTTCAGATAACGTGGCAGATTTATACCGTCCTTGTTATCAGTTAATTCA
ATCAGTAAATAAAGCAGTTTATTATTCATCTGTAACAGAGCAGACAGCGAATTTAAATACATTATTGGGTGAAGCCCGTT
TTTTAAGAGCACAGGCTTACTTTTTATTAGTGCAGACGTATGGCGGAGTTCCAATTGTTAACGAACATGTTACAACTCCA
GTATTATCTTTTACAAGAAATTCTGCAGAAGAAGTTTATACACAAATAATATCTGATTTAGATTTTGCTTTGGCAAATGT
TGGAACTACTGCTTATAGTACAACCGGAAGAGTAAACAAAAGAGCGGTTAATGATTTATTAGCAAAAGTATACCTTACCA
GAGGATATGAATCTTATGGTAAAGCCGATGATTTTTCAAAAGCAGCAGCTTATGCCGATGCAGCAATTGGAGGACAGACT
CTTGCAATTGCATTCGATCAGTTGTTTAAACCAGGAAATGATTTAAATGCTGAAACGATTTTTTCTGTTCAATATGATAA
AGCTTCAACAAGTACAGATCCAACGAAATTAGGAAACAACCAATTTTATTATTTTAGTTCGTATTTAGGAGGTGCAGAAA
CTGGAGCTCCGTTAAGAAGTTATAATTTATGTCCTACAGATTATGCTTTAGGTTTATATGAAAAAGGTGATGCAAGATGG
AACGCTACTTTTATGACAGAAATTGTAGAAGGTCCTGAAACAACAAATGGTGTAACAAAAACAATTTTATACTATCCTTA
TTACAGAAGTTCAAATCCTGCTTCATTAAAAGTTAGACATTTTTACGAGCCAAAATGGTTTACACCAGCAGATAAAACGG
CTTGGATGACAGCAAATGCATCGAGATTATCGGCTACGTTTGTTTATCACCCATGGGGAGAGTATTCTGCAGCACATACA
TTAATTAAAAACTTAGACTGTTATACTATTCCGGTTAAGAAATTTGATGATCCGGATCCTACTACACCTTCTAGCACAGG
TCCAGTTAGTACGAGAGATATTATTGTTTCGAGATTAGGAGAAACGTATTTAATTGCTGCCGAAGCCTATTTAAAAGCAG
GTGTGCCTTCAACAGGTTTAGATCGTTTAAACGAAGTAAGAAGAAGAGCAGGAGTTGCTAATGCAACAATCGGTCAATTC
AACATCGATTATATTTTAGATGAAAGAGGAAGAGAATTATTAGGAGAATATAAAAGATGGTTTGATTTGAAACGCACCGG
AACTTTAGTAGCAAGAGCTTCTGCATATAATTATAAAATTAAAGCAGCAAATTTTGTTGGTGTAGACGGTCAGCTTAAAA
TTTTAAGACCAATCCCTCAGTCGGCATTGGATTTAAACCAAAATAAAGATTTTCCTCAAAATCCTGGTTATTAG

Upstream 100 bases:

>100_bases
ATACGATCCGGAATGGGCAGCTTCATCTTTTGGAGTAAATCGTCCGGCATCAATAACAACGCAATTGGGAGTAAGTGTTA
AATTTTAATAAAGATATCAA

Downstream 100 bases:

>100_bases
TAATTTGTTAGTTTTTTGAGAACATTTGTTTTTTTGAAGAAGTTAAAAAGGAGTTTGGCCAAAGTGCCGGACTCCTTTCT
TAACTAAAAAGTAAATTGAT

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; Lipoprotein; LOW QUALITY PROTEIN Outer Membrane Protein

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MKKIIIMLGMIVTSLSSCSNYIEEESLSNVPADATYKTASGFQLLINTNYAWLKSIYGGNPWLFESGTDMYAEGRTPEPA
GLSQYALLIPTSDNVADLYRPCYQLIQSVNKAVYYSSVTEQTANLNTLLGEARFLRAQAYFLLVQTYGGVPIVNEHVTTP
VLSFTRNSAEEVYTQIISDLDFALANVGTTAYSTTGRVNKRAVNDLLAKVYLTRGYESYGKADDFSKAAAYADAAIGGQT
LAIAFDQLFKPGNDLNAETIFSVQYDKASTSTDPTKLGNNQFYYFSSYLGGAETGAPLRSYNLCPTDYALGLYEKGDARW
NATFMTEIVEGPETTNGVTKTILYYPYYRSSNPASLKVRHFYEPKWFTPADKTAWMTANASRLSATFVYHPWGEYSAAHT
LIKNLDCYTIPVKKFDDPDPTTPSSTGPVSTRDIIVSRLGETYLIAAEAYLKAGVPSTGLDRLNEVRRRAGVANATIGQF
NIDYILDERGRELLGEYKRWFDLKRTGTLVARASAYNYKIKAANFVGVDGQLKILRPIPQSALDLNQNKDFPQNPGY

Sequences:

>Translated_557_residues
MKKIIIMLGMIVTSLSSCSNYIEEESLSNVPADATYKTASGFQLLINTNYAWLKSIYGGNPWLFESGTDMYAEGRTPEPA
GLSQYALLIPTSDNVADLYRPCYQLIQSVNKAVYYSSVTEQTANLNTLLGEARFLRAQAYFLLVQTYGGVPIVNEHVTTP
VLSFTRNSAEEVYTQIISDLDFALANVGTTAYSTTGRVNKRAVNDLLAKVYLTRGYESYGKADDFSKAAAYADAAIGGQT
LAIAFDQLFKPGNDLNAETIFSVQYDKASTSTDPTKLGNNQFYYFSSYLGGAETGAPLRSYNLCPTDYALGLYEKGDARW
NATFMTEIVEGPETTNGVTKTILYYPYYRSSNPASLKVRHFYEPKWFTPADKTAWMTANASRLSATFVYHPWGEYSAAHT
LIKNLDCYTIPVKKFDDPDPTTPSSTGPVSTRDIIVSRLGETYLIAAEAYLKAGVPSTGLDRLNEVRRRAGVANATIGQF
NIDYILDERGRELLGEYKRWFDLKRTGTLVARASAYNYKIKAANFVGVDGQLKILRPIPQSALDLNQNKDFPQNPGY
>Mature_557_residues
MKKIIIMLGMIVTSLSSCSNYIEEESLSNVPADATYKTASGFQLLINTNYAWLKSIYGGNPWLFESGTDMYAEGRTPEPA
GLSQYALLIPTSDNVADLYRPCYQLIQSVNKAVYYSSVTEQTANLNTLLGEARFLRAQAYFLLVQTYGGVPIVNEHVTTP
VLSFTRNSAEEVYTQIISDLDFALANVGTTAYSTTGRVNKRAVNDLLAKVYLTRGYESYGKADDFSKAAAYADAAIGGQT
LAIAFDQLFKPGNDLNAETIFSVQYDKASTSTDPTKLGNNQFYYFSSYLGGAETGAPLRSYNLCPTDYALGLYEKGDARW
NATFMTEIVEGPETTNGVTKTILYYPYYRSSNPASLKVRHFYEPKWFTPADKTAWMTANASRLSATFVYHPWGEYSAAHT
LIKNLDCYTIPVKKFDDPDPTTPSSTGPVSTRDIIVSRLGETYLIAAEAYLKAGVPSTGLDRLNEVRRRAGVANATIGQF
NIDYILDERGRELLGEYKRWFDLKRTGTLVARASAYNYKIKAANFVGVDGQLKILRPIPQSALDLNQNKDFPQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61721; Mature: 61721

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIIMLGMIVTSLSSCSNYIEEESLSNVPADATYKTASGFQLLINTNYAWLKSIYGGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCHHHHHHHCCCC
PWLFESGTDMYAEGRTPEPAGLSQYALLIPTSDNVADLYRPCYQLIQSVNKAVYYSSVTE
CEEEECCCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEHHHHH
QTANLNTLLGEARFLRAQAYFLLVQTYGGVPIVNEHVTTPVLSFTRNSAEEVYTQIISDL
HHCCHHHHHHHHHHHHHHEEEEEEEECCCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHH
DFALANVGTTAYSTTGRVNKRAVNDLLAKVYLTRGYESYGKADDFSKAAAYADAAIGGQT
HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCC
LAIAFDQLFKPGNDLNAETIFSVQYDKASTSTDPTKLGNNQFYYFSSYLGGAETGAPLRS
CEEEHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
YNLCPTDYALGLYEKGDARWNATFMTEIVEGPETTNGVTKTILYYPYYRSSNPASLKVRH
CCCCCCHHEECEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEEE
FYEPKWFTPADKTAWMTANASRLSATFVYHPWGEYSAAHTLIKNLDCYTIPVKKFDDPDP
EECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCC
TTPSSTGPVSTRDIIVSRLGETYLIAAEAYLKAGVPSTGLDRLNEVRRRAGVANATIGQF
CCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHCCCCCCEECCE
NIDYILDERGRELLGEYKRWFDLKRTGTLVARASAYNYKIKAANFVGVDGQLKILRPIPQ
EEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECEEECCCCCEEEECCCCH
SALDLNQNKDFPQNPGY
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIIIMLGMIVTSLSSCSNYIEEESLSNVPADATYKTASGFQLLINTNYAWLKSIYGGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCHHHHHHHCCCC
PWLFESGTDMYAEGRTPEPAGLSQYALLIPTSDNVADLYRPCYQLIQSVNKAVYYSSVTE
CEEEECCCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEHHHHH
QTANLNTLLGEARFLRAQAYFLLVQTYGGVPIVNEHVTTPVLSFTRNSAEEVYTQIISDL
HHCCHHHHHHHHHHHHHHEEEEEEEECCCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHH
DFALANVGTTAYSTTGRVNKRAVNDLLAKVYLTRGYESYGKADDFSKAAAYADAAIGGQT
HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCC
LAIAFDQLFKPGNDLNAETIFSVQYDKASTSTDPTKLGNNQFYYFSSYLGGAETGAPLRS
CEEEHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
YNLCPTDYALGLYEKGDARWNATFMTEIVEGPETTNGVTKTILYYPYYRSSNPASLKVRH
CCCCCCHHEECEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEEE
FYEPKWFTPADKTAWMTANASRLSATFVYHPWGEYSAAHTLIKNLDCYTIPVKKFDDPDP
EECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCC
TTPSSTGPVSTRDIIVSRLGETYLIAAEAYLKAGVPSTGLDRLNEVRRRAGVANATIGQF
CCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHCCCCCCEECCE
NIDYILDERGRELLGEYKRWFDLKRTGTLVARASAYNYKIKAANFVGVDGQLKILRPIPQ
EEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECEEECCCCCEEEECCCCH
SALDLNQNKDFPQNPGY
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA