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The map label for this gene is 146301976

Identifier: 146301976

GI number: 146301976

Start: 5107523

End: 5109145

Strand: Reverse

Name: 146301976

Synonym: Fjoh_4240

Alternate gene names: NA

Gene position: 5109145-5107523 (Counterclockwise)

Preceding gene: 146301977

Following gene: 146301975

Centisome position: 83.8

GC content: 33.7

Gene sequence:

>1623_bases
ATGAAAACAGATCTAGAATTAATTAAAAAAGATATCGGAGCAGAAAAACTGGGAACAAATCTGTTATCAGTTTCAGAACG
GCTGGATAAACTGTCAGATAAAAGATTTTCAGATGTAATTTCTAAAGACGAAAATGGACGTATCCTGCAATGGATCAATT
TTGTACAAGAAGGAGGCGGAACACTCGGTATTTCATTAGTGGGTTACGCTTTTGTGCTAGAATATGTCGGCATACGGTTT
CTTAGAATTGCAGGAACCAGCGCAGGAGCCATTAATACCTTATTTCTTGCTGCAATGGGCAGTAAAGATGAACCTAAATC
AGCGGAGTTATATGATATGATGATGGATGATAAGCGGTTCTCTCTCAAAAGTTTTGTTGATGCCAAATTGGGAATTGTAA
AAAAAATAATTTTTTCTTTCACCAGCGGTTCGAATTTTTTGAAAAATTTAGCTTGGTTTTATGGAATTATCGCGCTGCTC
GCTTTAATTATTCTGCCGATTTTTATGGCGATTGGATTTTCTCTAAAAATTGCATATTTCGTTTTTTTAGCGGTTTTTTT
GTTTATCACCGTAAGAGTAATAATGTTGTTATATAGATTTCACAAATACAATTACGGCATTAATCCCGGTAAAAGTTTTG
AGGAATTTTTAAAGAAGGAATTAGAAATTTTCGGAATCAAAAATCTAAAAGATTTAAAATCAAAATCAGAAGGTGATTTT
ATACTAAATGATAAAATTTTCATGAGTACAAAAGGTGCCAGAGTGGAGTCACTCGATAATCTTTCCAGTCTTAAAAATAC
GGTATCAGATAAAAAATGGTATTCGGACATCTACGATGAGGTGCTTAAAAAAACAGATCATAATAAGTCTTTTGAACCTA
ATGATTCAAATTTTAATCAAAACCCGCCTAATTTGTATCTTATAAGGGAAGAAGACTCTCAGGATTACAATGCTTTAACC
AATAAAGAGAAAGCACATCAGAAAGAAAGCATTGATAAAATTGGTTTTGACTATTCTTTTGTGACAACAGATATTGCCAA
TCAATGCAAAATTGTACTGCCTAAAGACGAAAAACTGTACAAGTTTGATCCTGAGGGCAGCCCCGCTGTATTTGTAAGAG
CTTCTATGGCAATACCTGTGTTTTTTGAACCGAAAAAAATTGCCGTAAATAATACCAGTGACTGGCTGAAAACAAAAGGA
TTTATTAATCTCTCTACCGAAAGTATTTTTATTGACGGAGGTTCACTTTCTAATTTCCCTATTAATTTATTTCATAACAG
TCATATAACAGAGGCCAGGGTGCCTATTTTTGGAGCGCGCATACAAGATGAGAAGCCTGTTGAAAATAAAAAGCTGCGCC
TTACCTTTGCAAGTTACGCTTTCAGTATTCTCAATACACTGCGAAATAACGAAGATTCATCATTTTTGGCAATTAATCCG
TTTTATAAAAAATTCAGCATTGCCGAAATAAACACGTATGATACAAAAATAAGCTGGCTGAATTTTGCACTGACTAAAAA
TGAAAAAAGAAAATTATTCTTAGCAGGTGTAGAAGCAGCATTAGTTTTTTTGGAGCAGTTTAACTGGGAAGTGTATAAAG
AGGAACGAAAAAAAACATTGTAA

Upstream 100 bases:

>100_bases
TTACTGAGTAGTTGTAAATGTTAGTTAGAAATAAATAATCTGGAGGATCAGTCCAGTGAAAAAATTCCAGAAATTCAAAT
ACTAAAAATTAATCTAAGCT

Downstream 100 bases:

>100_bases
CCCTGTATTTTCCAATGCTGTTGGTCTGCCATAAATTTAAAAACAAATATTCTGCATTATTGAATTTTAATTATGGCTTA
AATTGTAATTAAAATACCGT

Product: patatin

Products: NA

Alternate protein names: Esterase

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKTDLELIKKDIGAEKLGTNLLSVSERLDKLSDKRFSDVISKDENGRILQWINFVQEGGGTLGISLVGYAFVLEYVGIRF
LRIAGTSAGAINTLFLAAMGSKDEPKSAELYDMMMDDKRFSLKSFVDAKLGIVKKIIFSFTSGSNFLKNLAWFYGIIALL
ALIILPIFMAIGFSLKIAYFVFLAVFLFITVRVIMLLYRFHKYNYGINPGKSFEEFLKKELEIFGIKNLKDLKSKSEGDF
ILNDKIFMSTKGARVESLDNLSSLKNTVSDKKWYSDIYDEVLKKTDHNKSFEPNDSNFNQNPPNLYLIREEDSQDYNALT
NKEKAHQKESIDKIGFDYSFVTTDIANQCKIVLPKDEKLYKFDPEGSPAVFVRASMAIPVFFEPKKIAVNNTSDWLKTKG
FINLSTESIFIDGGSLSNFPINLFHNSHITEARVPIFGARIQDEKPVENKKLRLTFASYAFSILNTLRNNEDSSFLAINP
FYKKFSIAEINTYDTKISWLNFALTKNEKRKLFLAGVEAALVFLEQFNWEVYKEERKKTL

Sequences:

>Translated_540_residues
MKTDLELIKKDIGAEKLGTNLLSVSERLDKLSDKRFSDVISKDENGRILQWINFVQEGGGTLGISLVGYAFVLEYVGIRF
LRIAGTSAGAINTLFLAAMGSKDEPKSAELYDMMMDDKRFSLKSFVDAKLGIVKKIIFSFTSGSNFLKNLAWFYGIIALL
ALIILPIFMAIGFSLKIAYFVFLAVFLFITVRVIMLLYRFHKYNYGINPGKSFEEFLKKELEIFGIKNLKDLKSKSEGDF
ILNDKIFMSTKGARVESLDNLSSLKNTVSDKKWYSDIYDEVLKKTDHNKSFEPNDSNFNQNPPNLYLIREEDSQDYNALT
NKEKAHQKESIDKIGFDYSFVTTDIANQCKIVLPKDEKLYKFDPEGSPAVFVRASMAIPVFFEPKKIAVNNTSDWLKTKG
FINLSTESIFIDGGSLSNFPINLFHNSHITEARVPIFGARIQDEKPVENKKLRLTFASYAFSILNTLRNNEDSSFLAINP
FYKKFSIAEINTYDTKISWLNFALTKNEKRKLFLAGVEAALVFLEQFNWEVYKEERKKTL
>Mature_540_residues
MKTDLELIKKDIGAEKLGTNLLSVSERLDKLSDKRFSDVISKDENGRILQWINFVQEGGGTLGISLVGYAFVLEYVGIRF
LRIAGTSAGAINTLFLAAMGSKDEPKSAELYDMMMDDKRFSLKSFVDAKLGIVKKIIFSFTSGSNFLKNLAWFYGIIALL
ALIILPIFMAIGFSLKIAYFVFLAVFLFITVRVIMLLYRFHKYNYGINPGKSFEEFLKKELEIFGIKNLKDLKSKSEGDF
ILNDKIFMSTKGARVESLDNLSSLKNTVSDKKWYSDIYDEVLKKTDHNKSFEPNDSNFNQNPPNLYLIREEDSQDYNALT
NKEKAHQKESIDKIGFDYSFVTTDIANQCKIVLPKDEKLYKFDPEGSPAVFVRASMAIPVFFEPKKIAVNNTSDWLKTKG
FINLSTESIFIDGGSLSNFPINLFHNSHITEARVPIFGARIQDEKPVENKKLRLTFASYAFSILNTLRNNEDSSFLAINP
FYKKFSIAEINTYDTKISWLNFALTKNEKRKLFLAGVEAALVFLEQFNWEVYKEERKKTL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61649; Mature: 61649

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDLELIKKDIGAEKLGTNLLSVSERLDKLSDKRFSDVISKDENGRILQWINFVQEGGG
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
TLGISLVGYAFVLEYVGIRFLRIAGTSAGAINTLFLAAMGSKDEPKSAELYDMMMDDKRF
EEHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHH
SLKSFVDAKLGIVKKIIFSFTSGSNFLKNLAWFYGIIALLALIILPIFMAIGFSLKIAYF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLAVFLFITVRVIMLLYRFHKYNYGINPGKSFEEFLKKELEIFGIKNLKDLKSKSEGDF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCE
ILNDKIFMSTKGARVESLDNLSSLKNTVSDKKWYSDIYDEVLKKTDHNKSFEPNDSNFNQ
EECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NPPNLYLIREEDSQDYNALTNKEKAHQKESIDKIGFDYSFVTTDIANQCKIVLPKDEKLY
CCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEE
KFDPEGSPAVFVRASMAIPVFFEPKKIAVNNTSDWLKTKGFINLSTESIFIDGGSLSNFP
EECCCCCCEEEEEEEEEEEEEECCCEEEECCCHHHHHCCCEEEECCCEEEEECCCCCCCC
INLFHNSHITEARVPIFGARIQDEKPVENKKLRLTFASYAFSILNTLRNNEDSSFLAINP
EEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECC
FYKKFSIAEINTYDTKISWLNFALTKNEKRKLFLAGVEAALVFLEQFNWEVYKEERKKTL
HHHCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MKTDLELIKKDIGAEKLGTNLLSVSERLDKLSDKRFSDVISKDENGRILQWINFVQEGGG
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
TLGISLVGYAFVLEYVGIRFLRIAGTSAGAINTLFLAAMGSKDEPKSAELYDMMMDDKRF
EEHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHH
SLKSFVDAKLGIVKKIIFSFTSGSNFLKNLAWFYGIIALLALIILPIFMAIGFSLKIAYF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLAVFLFITVRVIMLLYRFHKYNYGINPGKSFEEFLKKELEIFGIKNLKDLKSKSEGDF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCE
ILNDKIFMSTKGARVESLDNLSSLKNTVSDKKWYSDIYDEVLKKTDHNKSFEPNDSNFNQ
EECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NPPNLYLIREEDSQDYNALTNKEKAHQKESIDKIGFDYSFVTTDIANQCKIVLPKDEKLY
CCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEE
KFDPEGSPAVFVRASMAIPVFFEPKKIAVNNTSDWLKTKGFINLSTESIFIDGGSLSNFP
EECCCCCCEEEEEEEEEEEEEECCCEEEECCCHHHHHCCCEEEECCCEEEEECCCCCCCC
INLFHNSHITEARVPIFGARIQDEKPVENKKLRLTFASYAFSILNTLRNNEDSSFLAINP
EEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECC
FYKKFSIAEINTYDTKISWLNFALTKNEKRKLFLAGVEAALVFLEQFNWEVYKEERKKTL
HHHCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA