| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301977
Identifier: 146301977
GI number: 146301977
Start: 5109435
End: 5110265
Strand: Reverse
Name: 146301977
Synonym: Fjoh_4241
Alternate gene names: NA
Gene position: 5110265-5109435 (Counterclockwise)
Preceding gene: 146301980
Following gene: 146301976
Centisome position: 83.82
GC content: 39.11
Gene sequence:
>831_bases ATGAAAAAAATTAAATCAATCCTGATTCTGTCATTTACAGCATTAGTACTATTGTCTTGTAACAAAGAAGATGAGACTGT ATCATCTGGTCAAGAGTCTTTAAAAGTAACACCAGAGGTGTTGGAAAAACTTAAATCACTTTCTTTGAACACCTCAGATG TGCAGGTGATCCAAAATACTAGTTTAGAAGGTGCTGTTGAAGACGCGTTCCTTGTAGAAGGGGATATTATCATCACGCAG GCACAATTAAACAAAATGGATCTTCACGGAGGTATTACAACAGAACAATACCGTACTACTAATTTAGTATCTGCTCCAAG AACGATCAAAGTTGTTGGTTTATCAGGAACTGGTACAACAGCCCTGACTACCAATATGCGTAACGGACTGCAGGCTGCTA TAAACAGATACAATAATTTAGGATTATCTATAAACTTTACTTTGACTTTTAGTTCAAGTACTTCAGGCGCAAACATTGTA GTGCGGAGACAAACCGGATCTGCCGGCGGAGTAGCTGGTTTCCCTTCAGGAGGAAATCCATATAATTCAGTTACCTTATA TTCAGGATTAGATTCTTATTCAACAAATGTAAACGCACACGTTGCGGCACATGAAATAGGACATTGTATTGGTCTGCGTC ATACAGACTGGTTCAGCCGTCAAAGCTGCGGGCAGAATTCAAATGAAGGAACTGCTGGTGTAGGAGCAATTCTTATTCCG GGAACACCTTCTGGATATGATGCTACTTCTTACATGAGAGCGTGTTTCGGTTCAAACGAAACCGGTGCTTTCAATGCTAA TGATATTACAGCATTGAACTATTTATATTAA
Upstream 100 bases:
>100_bases TTTTAAGATTAAAATATATATAAATTTGATAATAAATATTACAATATTTTGTAAAAGAACCCCTGTCTATCAATTTATTT AACAAACTAAAGAAATTATT
Downstream 100 bases:
>100_bases AAACTAAACTATAGGGGTATCTTGCAAAATAGAAGAGGCTGTTTCATAATTTATGAAACAGCCTTTTTTATTGGATATAT TTTGACTCGTTTATCCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: M27 Family Peptidase; Ricin B Lectin
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKKIKSILILSFTALVLLSCNKEDETVSSGQESLKVTPEVLEKLKSLSLNTSDVQVIQNTSLEGAVEDAFLVEGDIIITQ AQLNKMDLHGGITTEQYRTTNLVSAPRTIKVVGLSGTGTTALTTNMRNGLQAAINRYNNLGLSINFTLTFSSSTSGANIV VRRQTGSAGGVAGFPSGGNPYNSVTLYSGLDSYSTNVNAHVAAHEIGHCIGLRHTDWFSRQSCGQNSNEGTAGVGAILIP GTPSGYDATSYMRACFGSNETGAFNANDITALNYLY
Sequences:
>Translated_276_residues MKKIKSILILSFTALVLLSCNKEDETVSSGQESLKVTPEVLEKLKSLSLNTSDVQVIQNTSLEGAVEDAFLVEGDIIITQ AQLNKMDLHGGITTEQYRTTNLVSAPRTIKVVGLSGTGTTALTTNMRNGLQAAINRYNNLGLSINFTLTFSSSTSGANIV VRRQTGSAGGVAGFPSGGNPYNSVTLYSGLDSYSTNVNAHVAAHEIGHCIGLRHTDWFSRQSCGQNSNEGTAGVGAILIP GTPSGYDATSYMRACFGSNETGAFNANDITALNYLY >Mature_276_residues MKKIKSILILSFTALVLLSCNKEDETVSSGQESLKVTPEVLEKLKSLSLNTSDVQVIQNTSLEGAVEDAFLVEGDIIITQ AQLNKMDLHGGITTEQYRTTNLVSAPRTIKVVGLSGTGTTALTTNMRNGLQAAINRYNNLGLSINFTLTFSSSTSGANIV VRRQTGSAGGVAGFPSGGNPYNSVTLYSGLDSYSTNVNAHVAAHEIGHCIGLRHTDWFSRQSCGQNSNEGTAGVGAILIP GTPSGYDATSYMRACFGSNETGAFNANDITALNYLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29202; Mature: 29202
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKSILILSFTALVLLSCNKEDETVSSGQESLKVTPEVLEKLKSLSLNTSDVQVIQNT CCHHHHHHHHHHHHHHEEECCCCCCHHHCCHHHEEECHHHHHHHHHCCCCCCCEEEEECC SLEGAVEDAFLVEGDIIITQAQLNKMDLHGGITTEQYRTTNLVSAPRTIKVVGLSGTGTT CCCCCCCCEEEEECCEEEEEECCCEEECCCCCCCCCEECCCEECCCCEEEEEEECCCCCE ALTTNMRNGLQAAINRYNNLGLSINFTLTFSSSTSGANIVVRRQTGSAGGVAGFPSGGNP EEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCC YNSVTLYSGLDSYSTNVNAHVAAHEIGHCIGLRHTDWFSRQSCGQNSNEGTAGVGAILIP CCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEEEC GTPSGYDATSYMRACFGSNETGAFNANDITALNYLY CCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKKIKSILILSFTALVLLSCNKEDETVSSGQESLKVTPEVLEKLKSLSLNTSDVQVIQNT CCHHHHHHHHHHHHHHEEECCCCCCHHHCCHHHEEECHHHHHHHHHCCCCCCCEEEEECC SLEGAVEDAFLVEGDIIITQAQLNKMDLHGGITTEQYRTTNLVSAPRTIKVVGLSGTGTT CCCCCCCCEEEEECCEEEEEECCCEEECCCCCCCCCEECCCEECCCCEEEEEEECCCCCE ALTTNMRNGLQAAINRYNNLGLSINFTLTFSSSTSGANIVVRRQTGSAGGVAGFPSGGNP EEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCC YNSVTLYSGLDSYSTNVNAHVAAHEIGHCIGLRHTDWFSRQSCGQNSNEGTAGVGAILIP CCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEEEC GTPSGYDATSYMRACFGSNETGAFNANDITALNYLY CCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA