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The map label for this gene is yteR [H]

Identifier: 146301972

GI number: 146301972

Start: 5104517

End: 5105641

Strand: Direct

Name: yteR [H]

Synonym: Fjoh_4236

Alternate gene names: 146301972

Gene position: 5104517-5105641 (Clockwise)

Preceding gene: 146301971

Following gene: 146301978

Centisome position: 83.72

GC content: 36.53

Gene sequence:

>1125_bases
ATGAAAAAATTAATTTCACTTTTAGCCGTCTCCATTTTTTACACTTCGAGTCTTTCTGCACAAGAACCATTTGATAAAAA
ATTGGTTTTAAAGCAAATGATGCTTGCCAATGATTATTTTATGCAAAAATGGCCCGACACAGGAAAAACAATTATTACCA
ATAAAGAACGTCCTAGTAATATCTGGACGCGCGGGGTTTATTATGAAGGATTAATGGCACTGCATGAAATTTTACCAAAA
GAAGCATATTATGATTATGCTTATGCTTGGGCTGAATTTCACAAATGGGGATTTAACGGCGGCAACGTAACCCGAAATGC
TGATAATTACTGTGCAGCTCAGACCTATATTGATTTGTACAATTTAGAACCTGATGCTAAAAAACTTAAAAACACAAAGG
CAAATATAAACATGCTTCTCAACACGCCTCAGCTAAATGACTGGTCATGGATTGATGCCATACAAATGGGAATGCCTGTT
TTTGCCAAAATGGGAGTGTTAGAGAAAAACAATCGTTATTTCGAAAAAATGTACGACATGTATATGTTTTCACGAAACAA
ACACGGCGATAATGGTTTATACAATCCTAAAGAAGGCTTATGGTGGCGTGATGCGGATTTTGATCCCCCGTATAAAGAAC
CTAACGGCAAAAACTGTTATTGGAGCCGTGGTAACGGATGGGTTATTGCCGCTCTGGCAAAAGTTTTAACTATTATTCCT
GAAAATGCACCGCACAGGGAACAATATGTAAAAGATTTAAAAGCTATGGCTGGAGCACTGGTTTCTATTCAAAGAGTTGA
TGGTTTTTGGAATGTAAGCTTACACGATCCATCAAATTTTGGTGAAAAAGAAACATCCGGAACCGCTTTATTTATTTATG
GAATGGCGTACGGAATAAACAGCGGGATTTTGAAAAAAGAAACCTATTTACCTGTTATTCAAAAAGCATGGAATGCTATT
ACAACCGAAAGTCTGCACACAAACGGTTTTTTAGGTTACCTGCAGTCGACTGGAAAAGAACCAAAAGACGGACAACCTTT
GTCTTACGACAAAATTCCTGATTTTGAAGATTATGGTTTAGGCTGTTTTTTATTGGCCGGATCAGAAATTTATAAATTAA
AATAA

Upstream 100 bases:

>100_bases
AGTTTGATGCAACAAAATGGATTCCAATGCCGTCCGGACTTTTAGGTCCTGTAACCCTGACCGCTCTAAAACAAGAAAAC
TAACTGCCAAATAACCACAA

Downstream 100 bases:

>100_bases
CAACAAAAAAGGCGGACATATAATATGGACCGCCTTTTTTTATCAAAACACTAACAACAAAATATCCTACATCATAAAAA
ACAAAGCTTTTTGAAGAGTA

Product: glycosyl hydrolase family protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKKLISLLAVSIFYTSSLSAQEPFDKKLVLKQMMLANDYFMQKWPDTGKTIITNKERPSNIWTRGVYYEGLMALHEILPK
EAYYDYAYAWAEFHKWGFNGGNVTRNADNYCAAQTYIDLYNLEPDAKKLKNTKANINMLLNTPQLNDWSWIDAIQMGMPV
FAKMGVLEKNNRYFEKMYDMYMFSRNKHGDNGLYNPKEGLWWRDADFDPPYKEPNGKNCYWSRGNGWVIAALAKVLTIIP
ENAPHREQYVKDLKAMAGALVSIQRVDGFWNVSLHDPSNFGEKETSGTALFIYGMAYGINSGILKKETYLPVIQKAWNAI
TTESLHTNGFLGYLQSTGKEPKDGQPLSYDKIPDFEDYGLGCFLLAGSEIYKLK

Sequences:

>Translated_374_residues
MKKLISLLAVSIFYTSSLSAQEPFDKKLVLKQMMLANDYFMQKWPDTGKTIITNKERPSNIWTRGVYYEGLMALHEILPK
EAYYDYAYAWAEFHKWGFNGGNVTRNADNYCAAQTYIDLYNLEPDAKKLKNTKANINMLLNTPQLNDWSWIDAIQMGMPV
FAKMGVLEKNNRYFEKMYDMYMFSRNKHGDNGLYNPKEGLWWRDADFDPPYKEPNGKNCYWSRGNGWVIAALAKVLTIIP
ENAPHREQYVKDLKAMAGALVSIQRVDGFWNVSLHDPSNFGEKETSGTALFIYGMAYGINSGILKKETYLPVIQKAWNAI
TTESLHTNGFLGYLQSTGKEPKDGQPLSYDKIPDFEDYGLGCFLLAGSEIYKLK
>Mature_374_residues
MKKLISLLAVSIFYTSSLSAQEPFDKKLVLKQMMLANDYFMQKWPDTGKTIITNKERPSNIWTRGVYYEGLMALHEILPK
EAYYDYAYAWAEFHKWGFNGGNVTRNADNYCAAQTYIDLYNLEPDAKKLKNTKANINMLLNTPQLNDWSWIDAIQMGMPV
FAKMGVLEKNNRYFEKMYDMYMFSRNKHGDNGLYNPKEGLWWRDADFDPPYKEPNGKNCYWSRGNGWVIAALAKVLTIIP
ENAPHREQYVKDLKAMAGALVSIQRVDGFWNVSLHDPSNFGEKETSGTALFIYGMAYGINSGILKKETYLPVIQKAWNAI
TTESLHTNGFLGYLQSTGKEPKDGQPLSYDKIPDFEDYGLGCFLLAGSEIYKLK

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 42881; Mature: 42881

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLISLLAVSIFYTSSLSAQEPFDKKLVLKQMMLANDYFMQKWPDTGKTIITNKERPSN
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
IWTRGVYYEGLMALHEILPKEAYYDYAYAWAEFHKWGFNGGNVTRNADNYCAAQTYIDLY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEE
NLEPDAKKLKNTKANINMLLNTPQLNDWSWIDAIQMGMPVFAKMGVLEKNNRYFEKMYDM
CCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
YMFSRNKHGDNGLYNPKEGLWWRDADFDPPYKEPNGKNCYWSRGNGWVIAALAKVLTIIP
HHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHCC
ENAPHREQYVKDLKAMAGALVSIQRVDGFWNVSLHDPSNFGEKETSGTALFIYGMAYGIN
CCCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCCCEEEEEEEHHCCC
SGILKKETYLPVIQKAWNAITTESLHTNGFLGYLQSTGKEPKDGQPLSYDKIPDFEDYGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GCFLLAGSEIYKLK
EEEEEECCEEEECC
>Mature Secondary Structure
MKKLISLLAVSIFYTSSLSAQEPFDKKLVLKQMMLANDYFMQKWPDTGKTIITNKERPSN
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
IWTRGVYYEGLMALHEILPKEAYYDYAYAWAEFHKWGFNGGNVTRNADNYCAAQTYIDLY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEE
NLEPDAKKLKNTKANINMLLNTPQLNDWSWIDAIQMGMPVFAKMGVLEKNNRYFEKMYDM
CCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
YMFSRNKHGDNGLYNPKEGLWWRDADFDPPYKEPNGKNCYWSRGNGWVIAALAKVLTIIP
HHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHCC
ENAPHREQYVKDLKAMAGALVSIQRVDGFWNVSLHDPSNFGEKETSGTALFIYGMAYGIN
CCCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCCCEEEEEEEHHCCC
SGILKKETYLPVIQKAWNAITTESLHTNGFLGYLQSTGKEPKDGQPLSYDKIPDFEDYGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GCFLLAGSEIYKLK
EEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]