| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301968
Identifier: 146301968
GI number: 146301968
Start: 5094887
End: 5096422
Strand: Reverse
Name: 146301968
Synonym: Fjoh_4232
Alternate gene names: NA
Gene position: 5096422-5094887 (Counterclockwise)
Preceding gene: 146301969
Following gene: 146301967
Centisome position: 83.59
GC content: 37.89
Gene sequence:
>1536_bases ATGCCAATGATTAACTCAAAAAAATTACTGTTTCTTTTTTTAGTTTTAAGTGTAAAATTCTCTGTAACAGCACAAGTAAA ACTGCCCGCTTTAGTTGGCGATAATATGGTTTTACAGCAGAATGCCAAAGTTAATTTATGGGGATGGGCCTCTCCAAACG AAAAAATCACTCTTAATTTAGGATGGGCAAATAATCCTGTTGAGGTAACAGCCGATGCAGAAGGAAACTGGAAAACAGCC GTTACTACACCAAACGGAAGCGACAAAGCCTTTGATATTACAATTAATGCTTCTAATAAAATTGTCCTCAAAAATATTCT GATAGGTGAAGTCTGGCTTTGTTCCGGACAATCAAATATGTTTTTCCCTGTTGGAAGAGAAGAAGGAACCTGGAAAACCG GAGTTAAAAATTACGAAGAAGAAGTAAAAAACGCTTCATTCCCCAATATCAGATTATTCACTGTAGCGCTTAATGCTTCA CAAAAACCGCTTGAAGATGTTACAGGAAACTGGAAAATATGTTCGCCGGAAAACATCAAAACATTTTCGGCTGTTGCCTA TTTTTTCGGAAGAGATTTGTATCAAAAACTTAATGTGCCAATTGGGTTAATTTCGACTTCTTGGGGAGGAACAAAAGCCG AAGCGTGGACAGCTCAGAATATTTTAGAAGACGAAACCGCGTTTTTGCCTATTCTTCAGGAAGATGCTAAAAACGAAAAA ATACATCAGGAAAAACTCGAAGCCTATTATCTGGCTTTAACCAATGAAAGAATTGCAAGTGCTGCCAACGCTCCAAAAGG ACAGTTGAAAAAGCCTAAAAAAGAACCCAACAAAACTTCGTATGTTTTATACAATGCCATGTTACACCCCATTGTAAATT ACACCATAAAAGGTGCAATCTGGTATCAGGGCGAAAGCAACTCCGGAAAAGCGTATTTGTACAGAAGTTTGTTTCCGGCA ATGGTAAAAAGCTGGAGAGACGAATGGAAGCAGGGCGATTTCCCATTTTACTATGTGCAGATTACACCGCATAAAGGACA AAATGCCGAAATACGCGAAGCACAGTTAATGTCATTAAAAACAATTCCAAACAGCGGTATGGTTGTAACAACCGATGTTG GCGACGCGCAAAACATTCACCCAATCGATAAACAGACAGTAGGTTACAGACTCGCCTTAATTACAAGAGCAAAAACCTAT GGCGAAAACAAACTCGTTTATTCAGGACCGATTTTTAGTCACATGAAAATAAAGAAACAAAAAGCACAATTGTTTTTTGA TTATGCCGATTCTGGATTAAAGAAAACAGGTGATGTTTTAAAAGAATTTGAAATTGCCGGAGAAGATCAGGTTTTTTATC CCGCAGATGCTAAAATTGACGGAAAAACTGTTGTCGTTTCTTCTTCAAAAGTAAAAGAACCGGCAGCTGTTCGTTTTGCA TGGAAAGCCGTTCCTGAACCTAATTTATTCAATAATGACAATTTACCGGCTTCTCCTTTTAGAACAGACGACTGGGTAAT AGTTGAAAAGAAGTAA
Upstream 100 bases:
>100_bases TCTGACAGCTTTTTTTTCATTTTTGTATTACACAAAACAGGAAAGCACAGGATGCATAACTGGTGTAACTATTTTAAATT TAAAATGTACTTAAAAATCA
Downstream 100 bases:
>100_bases AGCTTATTTTTTAAACACATAGAAACATAGTTTGCAGAAGCTTCGGAGCTATGTGTAAAAACTAGTTTTTAAAGAGCTTT TTTAGAGAATTAAAAATCTA
Product: sialate O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase; Sialate O-Acetylesterase Homolog; Glycosyl Hydrolase
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MPMINSKKLLFLFLVLSVKFSVTAQVKLPALVGDNMVLQQNAKVNLWGWASPNEKITLNLGWANNPVEVTADAEGNWKTA VTTPNGSDKAFDITINASNKIVLKNILIGEVWLCSGQSNMFFPVGREEGTWKTGVKNYEEEVKNASFPNIRLFTVALNAS QKPLEDVTGNWKICSPENIKTFSAVAYFFGRDLYQKLNVPIGLISTSWGGTKAEAWTAQNILEDETAFLPILQEDAKNEK IHQEKLEAYYLALTNERIASAANAPKGQLKKPKKEPNKTSYVLYNAMLHPIVNYTIKGAIWYQGESNSGKAYLYRSLFPA MVKSWRDEWKQGDFPFYYVQITPHKGQNAEIREAQLMSLKTIPNSGMVVTTDVGDAQNIHPIDKQTVGYRLALITRAKTY GENKLVYSGPIFSHMKIKKQKAQLFFDYADSGLKKTGDVLKEFEIAGEDQVFYPADAKIDGKTVVVSSSKVKEPAAVRFA WKAVPEPNLFNNDNLPASPFRTDDWVIVEKK
Sequences:
>Translated_511_residues MPMINSKKLLFLFLVLSVKFSVTAQVKLPALVGDNMVLQQNAKVNLWGWASPNEKITLNLGWANNPVEVTADAEGNWKTA VTTPNGSDKAFDITINASNKIVLKNILIGEVWLCSGQSNMFFPVGREEGTWKTGVKNYEEEVKNASFPNIRLFTVALNAS QKPLEDVTGNWKICSPENIKTFSAVAYFFGRDLYQKLNVPIGLISTSWGGTKAEAWTAQNILEDETAFLPILQEDAKNEK IHQEKLEAYYLALTNERIASAANAPKGQLKKPKKEPNKTSYVLYNAMLHPIVNYTIKGAIWYQGESNSGKAYLYRSLFPA MVKSWRDEWKQGDFPFYYVQITPHKGQNAEIREAQLMSLKTIPNSGMVVTTDVGDAQNIHPIDKQTVGYRLALITRAKTY GENKLVYSGPIFSHMKIKKQKAQLFFDYADSGLKKTGDVLKEFEIAGEDQVFYPADAKIDGKTVVVSSSKVKEPAAVRFA WKAVPEPNLFNNDNLPASPFRTDDWVIVEKK >Mature_510_residues PMINSKKLLFLFLVLSVKFSVTAQVKLPALVGDNMVLQQNAKVNLWGWASPNEKITLNLGWANNPVEVTADAEGNWKTAV TTPNGSDKAFDITINASNKIVLKNILIGEVWLCSGQSNMFFPVGREEGTWKTGVKNYEEEVKNASFPNIRLFTVALNASQ KPLEDVTGNWKICSPENIKTFSAVAYFFGRDLYQKLNVPIGLISTSWGGTKAEAWTAQNILEDETAFLPILQEDAKNEKI HQEKLEAYYLALTNERIASAANAPKGQLKKPKKEPNKTSYVLYNAMLHPIVNYTIKGAIWYQGESNSGKAYLYRSLFPAM VKSWRDEWKQGDFPFYYVQITPHKGQNAEIREAQLMSLKTIPNSGMVVTTDVGDAQNIHPIDKQTVGYRLALITRAKTYG ENKLVYSGPIFSHMKIKKQKAQLFFDYADSGLKKTGDVLKEFEIAGEDQVFYPADAKIDGKTVVVSSSKVKEPAAVRFAW KAVPEPNLFNNDNLPASPFRTDDWVIVEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=525, Percent_Identity=28.1904761904762, Blast_Score=180, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57257; Mature: 57126
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMINSKKLLFLFLVLSVKFSVTAQVKLPALVGDNMVLQQNAKVNLWGWASPNEKITLNL CCCCCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCEEEECCCEEEEEEECCCCCEEEEEE GWANNPVEVTADAEGNWKTAVTTPNGSDKAFDITINASNKIVLKNILIGEVWLCSGQSNM CCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEEEEEEEEECCCCCE FFPVGREEGTWKTGVKNYEEEVKNASFPNIRLFTVALNASQKPLEDVTGNWKICSPENIK EEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHCCCCEEEECCCCCH TFSAVAYFFGRDLYQKLNVPIGLISTSWGGTKAEAWTAQNILEDETAFLPILQEDAKNEK HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCHHEEHHHHHCCCCCH IHQEKLEAYYLALTNERIASAANAPKGQLKKPKKEPNKTSYVLYNAMLHPIVNYTIKGAI HHHHHHEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCEEEEEEE WYQGESNSGKAYLYRSLFPAMVKSWRDEWKQGDFPFYYVQITPHKGQNAEIREAQLMSLK EECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHEEEEEE TIPNSGMVVTTDVGDAQNIHPIDKQTVGYRLALITRAKTYGENKLVYSGPIFSHMKIKKQ ECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCEEEEECCCCHHHHHHHH KAQLFFDYADSGLKKTGDVLKEFEIAGEDQVFYPADAKIDGKTVVVSSSKVKEPAAVRFA HHEEEEEHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEE WKAVPEPNLFNNDNLPASPFRTDDWVIVEKK EECCCCCCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure PMINSKKLLFLFLVLSVKFSVTAQVKLPALVGDNMVLQQNAKVNLWGWASPNEKITLNL CCCCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCEEEECCCEEEEEEECCCCCEEEEEE GWANNPVEVTADAEGNWKTAVTTPNGSDKAFDITINASNKIVLKNILIGEVWLCSGQSNM CCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEEEEEEEEECCCCCE FFPVGREEGTWKTGVKNYEEEVKNASFPNIRLFTVALNASQKPLEDVTGNWKICSPENIK EEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHCCCCEEEECCCCCH TFSAVAYFFGRDLYQKLNVPIGLISTSWGGTKAEAWTAQNILEDETAFLPILQEDAKNEK HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCHHEEHHHHHCCCCCH IHQEKLEAYYLALTNERIASAANAPKGQLKKPKKEPNKTSYVLYNAMLHPIVNYTIKGAI HHHHHHEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCEEEEEEE WYQGESNSGKAYLYRSLFPAMVKSWRDEWKQGDFPFYYVQITPHKGQNAEIREAQLMSLK EECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHEEEEEE TIPNSGMVVTTDVGDAQNIHPIDKQTVGYRLALITRAKTYGENKLVYSGPIFSHMKIKKQ ECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCEEEEECCCCHHHHHHHH KAQLFFDYADSGLKKTGDVLKEFEIAGEDQVFYPADAKIDGKTVVVSSSKVKEPAAVRFA HHEEEEEHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEE WKAVPEPNLFNNDNLPASPFRTDDWVIVEKK EECCCCCCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA