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The map label for this gene is yesY [H]

Identifier: 146301962

GI number: 146301962

Start: 5088463

End: 5089938

Strand: Direct

Name: yesY [H]

Synonym: Fjoh_4226

Alternate gene names: 146301962

Gene position: 5088463-5089938 (Clockwise)

Preceding gene: 146301961

Following gene: 146301971

Centisome position: 83.46

GC content: 37.6

Gene sequence:

>1476_bases
ATGAAATCACTTAAACTACTTTTCTTTTTATTTCTGGCTGTATTATTCTTCAATTTTACACCAAAACAAGACAACAAACC
CACTCTTTTTATGATTGGTGATTCTACTGTAAAAAACGGAAAAGGCAACGGCGCTGGCGGACTTTGGGGCTGGGGAGATT
TTATTGGACAGTTTTTGGATACAACCAAAATTAATGTAGAAAATCATGCTTTGGGCGGTACCAGTAGCAGAACTTTTCAG
GATAAAGGTTTGTGGAATGCCGTTTTAAATAAACTAAAAAAAGGTGATTATGTTTTAATTCAGTTTGGGCATAATGATGA
CGGACCTATAAATGACAGTCTGCGTGCACGCGGCACTATAAAAGGGATTGGAAACGAAACTCAGGAAATTGATAATATTC
TCACGAAAAAACACGAAATCGTACACAGTTACGGCTGGTATATCCAGAAAGTAATTCGCGAAGCAAAATCAAAAGGCGCA
ATCCCGATTGTGTGTTCGCCAATTCCGAGAAATGACTGGAAAGATGGAAAAGTGCCCCGCAATGATACTTCATACGGTTT
ATGGGCGAAACAAATTGCCGAAAAAGAGAAAGTTACGTTCATCAATTTGAATGAGAAAATGGCGCTTGAAATGGAAAAAT
CAGGAGAAGAAAAAGTAACCGGAACTTATTTTTATAAAAAAGACCATACGCATACTTCTTCAAAAGGTGCAGTTTTGTCT
GCTTCTATAATTATTGAGGAATTGAAAAACAGTAAAAATTCATTAAAAAATTATGTCCTGAAAAATTCAAAAATTGTGCT
GCCAGTTAAAAATAAAGTCTTTTTAATTGGCGATTCTACTATGGCCGATAATGGAAATCCGGATGCTGTGGGCTGGGGCG
TTGTGTTTCCTAAATATTGCGACACTACCCGAATTGAAGTAATAAATAAAGCAAAGGGCGGCCGAAGCAGCAGAACATTT
GATTATGAAGGGCTTTGGGATGAAGTCAAAAATCAGTTACAGCCGGGAAATTTAGTTTTGATTCAGTTTGGGCATAATGA
TGCCGGCGCTGTTGACAAGGAAAAATTCAGAGGTTCTTTAAAAGGAATTGGCGATGAAACGCAGGAAGTGATTCGTCCTG
ATGGTTCAAAAGAAATCGTTCATACTTTTGGCTGGTACATGACGAAGTTTATTCGCGAAGCTAAAGCAAAAGGTGCGATT
CCGATTGTTTTGAGCTTAACGCCAAGAAACGAATGGCCAAACGATAAAGTAGAGCGCAGAACGGATACTTATATTAAATG
GTCTAAAGAAATTGCTGAGAAAGAAAACGTGTTTTATATTGACTTAAGCGAGGCTGTGGCTCAAAAATATGAGGCTTTGG
GAAAAGAAAAGGTAAAAGTATTTTTCCCGAAAGATCATACGCATACAGGTATTGAAGGTGCTGATTTGAATGCTTTAACT
GCAGCGGAATGTATTAAGAAGAATTATGAATTGTGA

Upstream 100 bases:

>100_bases
ACAATAGTTAAAAAAAACTTTGCGAACCTTGCGGTTAAATAAAATCATTCCACAATTCACAACTCACAATTCACAACTCA
CAATTCATAATTCAAAAAAT

Downstream 100 bases:

>100_bases
ATTATGAATTGTTAATTATTAATTATAAATTGTCAATTATTAATTATGAACTTTGCGTTATTTAACTATATCTGAAAAAA
ACTGGTGTGCTTTGCGGTTA

Product: GDSL family lipase

Products: NA

Alternate protein names: RGAE [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKSLKLLFFLFLAVLFFNFTPKQDNKPTLFMIGDSTVKNGKGNGAGGLWGWGDFIGQFLDTTKINVENHALGGTSSRTFQ
DKGLWNAVLNKLKKGDYVLIQFGHNDDGPINDSLRARGTIKGIGNETQEIDNILTKKHEIVHSYGWYIQKVIREAKSKGA
IPIVCSPIPRNDWKDGKVPRNDTSYGLWAKQIAEKEKVTFINLNEKMALEMEKSGEEKVTGTYFYKKDHTHTSSKGAVLS
ASIIIEELKNSKNSLKNYVLKNSKIVLPVKNKVFLIGDSTMADNGNPDAVGWGVVFPKYCDTTRIEVINKAKGGRSSRTF
DYEGLWDEVKNQLQPGNLVLIQFGHNDAGAVDKEKFRGSLKGIGDETQEVIRPDGSKEIVHTFGWYMTKFIREAKAKGAI
PIVLSLTPRNEWPNDKVERRTDTYIKWSKEIAEKENVFYIDLSEAVAQKYEALGKEKVKVFFPKDHTHTGIEGADLNALT
AAECIKKNYEL

Sequences:

>Translated_491_residues
MKSLKLLFFLFLAVLFFNFTPKQDNKPTLFMIGDSTVKNGKGNGAGGLWGWGDFIGQFLDTTKINVENHALGGTSSRTFQ
DKGLWNAVLNKLKKGDYVLIQFGHNDDGPINDSLRARGTIKGIGNETQEIDNILTKKHEIVHSYGWYIQKVIREAKSKGA
IPIVCSPIPRNDWKDGKVPRNDTSYGLWAKQIAEKEKVTFINLNEKMALEMEKSGEEKVTGTYFYKKDHTHTSSKGAVLS
ASIIIEELKNSKNSLKNYVLKNSKIVLPVKNKVFLIGDSTMADNGNPDAVGWGVVFPKYCDTTRIEVINKAKGGRSSRTF
DYEGLWDEVKNQLQPGNLVLIQFGHNDAGAVDKEKFRGSLKGIGDETQEVIRPDGSKEIVHTFGWYMTKFIREAKAKGAI
PIVLSLTPRNEWPNDKVERRTDTYIKWSKEIAEKENVFYIDLSEAVAQKYEALGKEKVKVFFPKDHTHTGIEGADLNALT
AAECIKKNYEL
>Mature_491_residues
MKSLKLLFFLFLAVLFFNFTPKQDNKPTLFMIGDSTVKNGKGNGAGGLWGWGDFIGQFLDTTKINVENHALGGTSSRTFQ
DKGLWNAVLNKLKKGDYVLIQFGHNDDGPINDSLRARGTIKGIGNETQEIDNILTKKHEIVHSYGWYIQKVIREAKSKGA
IPIVCSPIPRNDWKDGKVPRNDTSYGLWAKQIAEKEKVTFINLNEKMALEMEKSGEEKVTGTYFYKKDHTHTSSKGAVLS
ASIIIEELKNSKNSLKNYVLKNSKIVLPVKNKVFLIGDSTMADNGNPDAVGWGVVFPKYCDTTRIEVINKAKGGRSSRTF
DYEGLWDEVKNQLQPGNLVLIQFGHNDAGAVDKEKFRGSLKGIGDETQEVIRPDGSKEIVHTFGWYMTKFIREAKAKGAI
PIVLSLTPRNEWPNDKVERRTDTYIKWSKEIAEKENVFYIDLSEAVAQKYEALGKEKVKVFFPKDHTHTGIEGADLNALT
AAECIKKNYEL

Specific function: May play role in the degradation of rhamnogalacturonan derived from plant cell walls. Probably has broad substrate specificity and may degrade several types of acetylated substrates [H]

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 55137; Mature: 55137

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKLLFFLFLAVLFFNFTPKQDNKPTLFMIGDSTVKNGKGNGAGGLWGWGDFIGQFLD
CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHC
TTKINVENHALGGTSSRTFQDKGLWNAVLNKLKKGDYVLIQFGHNDDGPINDSLRARGTI
CEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCEEE
KGIGNETQEIDNILTKKHEIVHSYGWYIQKVIREAKSKGAIPIVCSPIPRNDWKDGKVPR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
NDTSYGLWAKQIAEKEKVTFINLNEKMALEMEKSGEEKVTGTYFYKKDHTHTSSKGAVLS
CCCCCCHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEH
ASIIIEELKNSKNSLKNYVLKNSKIVLPVKNKVFLIGDSTMADNGNPDAVGWGVVFPKYC
HHHHHHHHHCHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEECEECCCCC
DTTRIEVINKAKGGRSSRTFDYEGLWDEVKNQLQPGNLVLIQFGHNDAGAVDKEKFRGSL
CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
KGIGDETQEVIRPDGSKEIVHTFGWYMTKFIREAKAKGAIPIVLSLTPRNEWPNDKVERR
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH
TDTYIKWSKEIAEKENVFYIDLSEAVAQKYEALGKEKVKVFFPKDHTHTGIEGADLNALT
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHH
AAECIKKNYEL
HHHHHHHCCCC
>Mature Secondary Structure
MKSLKLLFFLFLAVLFFNFTPKQDNKPTLFMIGDSTVKNGKGNGAGGLWGWGDFIGQFLD
CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHC
TTKINVENHALGGTSSRTFQDKGLWNAVLNKLKKGDYVLIQFGHNDDGPINDSLRARGTI
CEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCEEE
KGIGNETQEIDNILTKKHEIVHSYGWYIQKVIREAKSKGAIPIVCSPIPRNDWKDGKVPR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
NDTSYGLWAKQIAEKEKVTFINLNEKMALEMEKSGEEKVTGTYFYKKDHTHTSSKGAVLS
CCCCCCHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEH
ASIIIEELKNSKNSLKNYVLKNSKIVLPVKNKVFLIGDSTMADNGNPDAVGWGVVFPKYC
HHHHHHHHHCHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEECEECCCCC
DTTRIEVINKAKGGRSSRTFDYEGLWDEVKNQLQPGNLVLIQFGHNDAGAVDKEKFRGSL
CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
KGIGDETQEVIRPDGSKEIVHTFGWYMTKFIREAKAKGAIPIVLSLTPRNEWPNDKVERR
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH
TDTYIKWSKEIAEKENVFYIDLSEAVAQKYEALGKEKVKVFFPKDHTHTGIEGADLNALT
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHH
AAECIKKNYEL
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]