| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301946
Identifier: 146301946
GI number: 146301946
Start: 5059990
End: 5060577
Strand: Reverse
Name: 146301946
Synonym: Fjoh_4210
Alternate gene names: NA
Gene position: 5060577-5059990 (Counterclockwise)
Preceding gene: 146301947
Following gene: 146301945
Centisome position: 83.0
GC content: 36.22
Gene sequence:
>588_bases ATGAGCAGTAAAGCCGAAATTTTAAACAGAATAAAAGCGAATCAGCCTGATTTGGTTACGGAACTGCCGGATTTAAATCT TTTAGGTTCCGAGAATTTTGATACACTCGAAACTTATAAAACGGTTTTAAAAGGAATTGGCGGAGATCCGGTTGAAGTAT CAAACTATCAGGAAATCATCGATTATATAAAAGCAAATTATAATCTTCAAAAAAGATTAATTACAACACTCCCGGAACTT TCAGAAATTGCTTCTTTAGACTGGAACAATGTCGATCCGCATTCGCTTCAGGATGTTGAGCTTACAGTTATAAAAGCACA TTTTGGAGTTGCAGAAAACAGCGGACTCTGGGTAACAGATGATATTTTAGGACAGCGTGTTTCGCCTTTTATTGCACAGT ATTTAGCAATAATTGTTCACAAAAATGATATTGTTAGAACCATGCAGCAAGCTTATGAAAGAATAGGGAATCAGGAATAT GGTTTCGGGACTTTTATTGCAGGACCATCAAAAACGGCAGATATCGAACAATCGTTAGTTTTAGGTGCGCATGGAGCTAG AGGACTAATTGTTTTTTTATTAGATTAG
Upstream 100 bases:
>100_bases ATGAACAAATGGTACGACCAGCGCGAAATGCCAGACGTACCGCAGGAATCTTTTAGAGAATGGTACAAGAAAAATTCGAG AGAATCTAAAACAAAAGACA
Downstream 100 bases:
>100_bases AGAAAAATAAATTTTATAGAAAAAGAGGACTGCTAAGTCCTCTTTTTTATTTTCAATATATAGGGAAAATCTCAAATGAG AGAAGTAAAATATAAGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: LOW QUALITY PROTEIN YkgG Family Protein
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSSKAEILNRIKANQPDLVTELPDLNLLGSENFDTLETYKTVLKGIGGDPVEVSNYQEIIDYIKANYNLQKRLITTLPEL SEIASLDWNNVDPHSLQDVELTVIKAHFGVAENSGLWVTDDILGQRVSPFIAQYLAIIVHKNDIVRTMQQAYERIGNQEY GFGTFIAGPSKTADIEQSLVLGAHGARGLIVFLLD
Sequences:
>Translated_195_residues MSSKAEILNRIKANQPDLVTELPDLNLLGSENFDTLETYKTVLKGIGGDPVEVSNYQEIIDYIKANYNLQKRLITTLPEL SEIASLDWNNVDPHSLQDVELTVIKAHFGVAENSGLWVTDDILGQRVSPFIAQYLAIIVHKNDIVRTMQQAYERIGNQEY GFGTFIAGPSKTADIEQSLVLGAHGARGLIVFLLD >Mature_194_residues SSKAEILNRIKANQPDLVTELPDLNLLGSENFDTLETYKTVLKGIGGDPVEVSNYQEIIDYIKANYNLQKRLITTLPELS EIASLDWNNVDPHSLQDVELTVIKAHFGVAENSGLWVTDDILGQRVSPFIAQYLAIIVHKNDIVRTMQQAYERIGNQEYG FGTFIAGPSKTADIEQSLVLGAHGARGLIVFLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21643; Mature: 21512
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKAEILNRIKANQPDLVTELPDLNLLGSENFDTLETYKTVLKGIGGDPVEVSNYQEII CCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH DYIKANYNLQKRLITTLPELSEIASLDWNNVDPHSLQDVELTVIKAHFGVAENSGLWVTD HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEECCCCCEEEH DILGQRVSPFIAQYLAIIVHKNDIVRTMQQAYERIGNQEYGFGTFIAGPSKTADIEQSLV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHH LGAHGARGLIVFLLD CCCCCCCEEEEEEEC >Mature Secondary Structure SSKAEILNRIKANQPDLVTELPDLNLLGSENFDTLETYKTVLKGIGGDPVEVSNYQEII CCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH DYIKANYNLQKRLITTLPELSEIASLDWNNVDPHSLQDVELTVIKAHFGVAENSGLWVTD HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEECCCCCEEEH DILGQRVSPFIAQYLAIIVHKNDIVRTMQQAYERIGNQEYGFGTFIAGPSKTADIEQSLV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHH LGAHGARGLIVFLLD CCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA