| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301921
Identifier: 146301921
GI number: 146301921
Start: 5026010
End: 5026474
Strand: Reverse
Name: 146301921
Synonym: Fjoh_4185
Alternate gene names: NA
Gene position: 5026474-5026010 (Counterclockwise)
Preceding gene: 146301922
Following gene: 146301920
Centisome position: 82.44
GC content: 34.62
Gene sequence:
>465_bases ATGAAACAGAGCGCCGGAATATTAGCATATAAATTTGTAGATAAAACCATTTTTTTCTTTTTGGTTCATCCAGGCGGTCC GTTTTGGAAAAATAAAGATTTAGAAAGCTGGTCAATTCCAAAAGGAGAATTTACTATTGAAGAAGATCCGTTAGAAGCTG CTAAACGAGAATTTGAGGAAGAAACGGGTTTTAAAGTCGATGGAGATTTTATTAAACTTGAATATGTAAAATTGAAATCG GGTAAAATGGTTCATGCATGGGCTGTTGAATTTGAGCTCGATGAATCTTTGATTAAAAGCAATGACTTTGAAATGGAATG GCCTCCAAAATCCGGTAAACTTCAAAGTTTTCCTGAAGTAGACAAAGGCGAATGGTTTCAAACTGCCGAAGCCATAAAGA AAATAAATCCAGCACAGGCTGATTTTATTGTTCAGATGGTTTCTAAAATTTCATCTTCACTTTAA
Upstream 100 bases:
>100_bases TAATGTTGTTCCGCCAAATGGTAAATCATAACTAAATAGTTAAGATTGAAAAAGAATGACGATATTTATACAGTAAGATT AAAAAACAAACAGTAATTGT
Downstream 100 bases:
>100_bases AGCACAATAACGGCTTTGCAAAATAATTTTTGTACTTTCCATTTTGGTTTACCGCTAATAGTATAAAGCGGTTCTAAAAA GTAAATTAAAAATTATGAAT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT-Like Protein; MutT/Nudix Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase Protein; NUDIX Hydrolase Family Protein; NUDIX Domain-Contain Protein; NTP Pyrophosphohydrolase; MutT Protein; Hydrolase NUDIX Family; MutT-Like Domain-Containing Protein; NUDIX Family Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKQSAGILAYKFVDKTIFFFLVHPGGPFWKNKDLESWSIPKGEFTIEEDPLEAAKREFEEETGFKVDGDFIKLEYVKLKS GKMVHAWAVEFELDESLIKSNDFEMEWPPKSGKLQSFPEVDKGEWFQTAEAIKKINPAQADFIVQMVSKISSSL
Sequences:
>Translated_154_residues MKQSAGILAYKFVDKTIFFFLVHPGGPFWKNKDLESWSIPKGEFTIEEDPLEAAKREFEEETGFKVDGDFIKLEYVKLKS GKMVHAWAVEFELDESLIKSNDFEMEWPPKSGKLQSFPEVDKGEWFQTAEAIKKINPAQADFIVQMVSKISSSL >Mature_154_residues MKQSAGILAYKFVDKTIFFFLVHPGGPFWKNKDLESWSIPKGEFTIEEDPLEAAKREFEEETGFKVDGDFIKLEYVKLKS GKMVHAWAVEFELDESLIKSNDFEMEWPPKSGKLQSFPEVDKGEWFQTAEAIKKINPAQADFIVQMVSKISSSL
Specific function: Unknown
COG id: COG4119
COG function: function code LR; Predicted NTP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17675; Mature: 17675
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSAGILAYKFVDKTIFFFLVHPGGPFWKNKDLESWSIPKGEFTIEEDPLEAAKREFEE CCCCCCEEEHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH ETGFKVDGDFIKLEYVKLKSGKMVHAWAVEFELDESLIKSNDFEMEWPPKSGKLQSFPEV HCCCEECCCEEEEEEEEECCCCEEEEEEEEEECCHHHHCCCCCEEECCCCCCCCCCCCCC DKGEWFQTAEAIKKINPAQADFIVQMVSKISSSL CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQSAGILAYKFVDKTIFFFLVHPGGPFWKNKDLESWSIPKGEFTIEEDPLEAAKREFEE CCCCCCEEEHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH ETGFKVDGDFIKLEYVKLKSGKMVHAWAVEFELDESLIKSNDFEMEWPPKSGKLQSFPEV HCCCEECCCEEEEEEEEECCCCEEEEEEEEEECCHHHHCCCCCEEECCCCCCCCCCCCCC DKGEWFQTAEAIKKINPAQADFIVQMVSKISSSL CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA