| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yieH [H]
Identifier: 146301920
GI number: 146301920
Start: 5025277
End: 5025915
Strand: Reverse
Name: yieH [H]
Synonym: Fjoh_4184
Alternate gene names: 146301920
Gene position: 5025915-5025277 (Counterclockwise)
Preceding gene: 146301921
Following gene: 146301914
Centisome position: 82.43
GC content: 36.31
Gene sequence:
>639_bases ATGAATGTAAAATGTATTATTTTCGATTGTGACGGAGTTTTGGTTGATACTGAGAAAATTGGCAACGGAATACTGCTGGC AATGGCTCAGGAACACGGATTCGAAATGGAACTCGAAGATGCATACCGATATTTTAACGGTCGAAATTTAAAAGATTGTT TTCGTCATATTGAAGAAGCAATTGACCAGAAACTGCCTGAAAATTTTGAAACAGAATATCGCGAGAAAAGTTTTGAAGCT TTTAAAACACAGGTAAAACCTATGAAAGGCATTGAAGATTTTATTGCAAAATTAAAAATTCCGTATTGTGTGGCATCAAG CGGACCTGTCGAAAAAATCCGTTTGAATCTTGAAGTGTCGGGGTTGATCGACAAATTCGAAAATAAAATATTCAGTTCGT ATCAAATTGGCAGCTGGAAACCAGAACCGGGAATTTTTCTGCAGGCCGCTCAGCAAATGGGTTTTGAAGTAAAAGACTGT ATTGTGATAGAAGACAGTAAAGCAGGAGTAAAGGCAGGTGTAAGCGGAGGTTTTAAAGTATACGGTTTTGTTAATGGTTT TAATAACGAAGATTTAGAAGAAGAAGGAGCCATTTTATTTGACAGCTACGAAGAATTGAGTAAAATGCTGTCAATTTAA
Upstream 100 bases:
>100_bases CTTTAAAGCACAATAACGGCTTTGCAAAATAATTTTTGTACTTTCCATTTTGGTTTACCGCTAATAGTATAAAGCGGTTC TAAAAAGTAAATTAAAAATT
Downstream 100 bases:
>100_bases TTTTAGAAAATAATCTATAAAAAAAGCTGTCCTTTTTGAGGACAGCTTTACATTAGTTGTGTTGTAGTTTAATAATTAAT TTATTTTAACCAAATGAGCT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNVKCIIFDCDGVLVDTEKIGNGILLAMAQEHGFEMELEDAYRYFNGRNLKDCFRHIEEAIDQKLPENFETEYREKSFEA FKTQVKPMKGIEDFIAKLKIPYCVASSGPVEKIRLNLEVSGLIDKFENKIFSSYQIGSWKPEPGIFLQAAQQMGFEVKDC IVIEDSKAGVKAGVSGGFKVYGFVNGFNNEDLEEEGAILFDSYEELSKMLSI
Sequences:
>Translated_212_residues MNVKCIIFDCDGVLVDTEKIGNGILLAMAQEHGFEMELEDAYRYFNGRNLKDCFRHIEEAIDQKLPENFETEYREKSFEA FKTQVKPMKGIEDFIAKLKIPYCVASSGPVEKIRLNLEVSGLIDKFENKIFSSYQIGSWKPEPGIFLQAAQQMGFEVKDC IVIEDSKAGVKAGVSGGFKVYGFVNGFNNEDLEEEGAILFDSYEELSKMLSI >Mature_212_residues MNVKCIIFDCDGVLVDTEKIGNGILLAMAQEHGFEMELEDAYRYFNGRNLKDCFRHIEEAIDQKLPENFETEYREKSFEA FKTQVKPMKGIEDFIAKLKIPYCVASSGPVEKIRLNLEVSGLIDKFENKIFSSYQIGSWKPEPGIFLQAAQQMGFEVKDC IVIEDSKAGVKAGVSGGFKVYGFVNGFNNEDLEEEGAILFDSYEELSKMLSI
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=209, Percent_Identity=28.2296650717703, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI87082080, Length=212, Percent_Identity=25.4716981132075, Blast_Score=62, Evalue=3e-11, Organism=Drosophila melanogaster, GI116008157, Length=186, Percent_Identity=29.5698924731183, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23976; Mature: 23976
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKCIIFDCDGVLVDTEKIGNGILLAMAQEHGFEMELEDAYRYFNGRNLKDCFRHIEEA CCEEEEEEECCCEEEEHHHCCCEEEEEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHH IDQKLPENFETEYREKSFEAFKTQVKPMKGIEDFIAKLKIPYCVASSGPVEKIRLNLEVS HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEEEHH GLIDKFENKIFSSYQIGSWKPEPGIFLQAAQQMGFEVKDCIVIEDSKAGVKAGVSGGFKV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEE YGFVNGFNNEDLEEEGAILFDSYEELSKMLSI EEEEECCCCCCCCCCCCEEEECHHHHHHHHCC >Mature Secondary Structure MNVKCIIFDCDGVLVDTEKIGNGILLAMAQEHGFEMELEDAYRYFNGRNLKDCFRHIEEA CCEEEEEEECCCEEEEHHHCCCEEEEEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHH IDQKLPENFETEYREKSFEAFKTQVKPMKGIEDFIAKLKIPYCVASSGPVEKIRLNLEVS HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEEEHH GLIDKFENKIFSSYQIGSWKPEPGIFLQAAQQMGFEVKDCIVIEDSKAGVKAGVSGGFKV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEE YGFVNGFNNEDLEEEGAILFDSYEELSKMLSI EEEEECCCCCCCCCCCCEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]