| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301884
Identifier: 146301884
GI number: 146301884
Start: 4980806
End: 4981558
Strand: Reverse
Name: 146301884
Synonym: Fjoh_4148
Alternate gene names: NA
Gene position: 4981558-4980806 (Counterclockwise)
Preceding gene: 146301885
Following gene: 146301883
Centisome position: 81.71
GC content: 28.69
Gene sequence:
>753_bases ATGATTAAAGATCTAGGACATGGTTATAAAATTATAGACAACAAATTTATTCTTTGTTATGAAAGCGAAGTGTTTAAAAA GTTTTACAAAACGATTGATTTTGAAACTTTTAAAATAACAGTCACAAACGCAGAATATGACAATGATGGTTTTGCATCAA CGATTTATTTTACAGATAAAAACCATGTTTATATTCAAAGCGCTTTTACCGCTTTTGCGATTCTTGAAGATGCAAAATCT AATGATTTTAAAGTAATAGATATTAAAAAAGGATATACATTTTCAAATGGAAATTATTTTCGGCATGATGATAAGATGCC TTTCGATCTGAGTAAAGCCAAACACCTCAATAATTATCACATTCAGGTTGGCGATAAATTATATTTTGGAGACGTAAAAC TGATTGAAAATGTCGATTTAGAGTCATTTACAATTCCGCATCCGGATTTAATTGGAAATCTGGCTTTAGATAAAAACCAT GTTTTCTTTAAAGGAAATATAGTTCCAGAAGCCAATCCAAATACATTTAAAGTTCTGGAAGGTTGTTTAGACGGAACTTA TTATTTAGAATGCGATAATGTTTTTTATGCTAAAGATGATAAATATGCTTATTACATCAGAACAATCAATGATGAAGTAA AAGTGATAAAAACCAAAAGCCTGACCGATTTTCATTTTAAAGTTATGGATGAAAGAGGATATGCTTTTGATAAGGAATAC AGTTATTATATGGGAAAAAGAACTAAAATCTAA
Upstream 100 bases:
>100_bases GGACAATCATGAAATGGCTGTAAGTTCCATTATCTGTATACGTCCAAAAAAGCTCTAATCAATTCGAAATAATTAGATAA AAAATAAAAATAAAGCGATC
Downstream 100 bases:
>100_bases AAACAATGGCGGTATATAAATTCGACGAAGTACTAAATGACCTAATGGATTATTTTATTCTGGGCGATCCAGATTATCTG CTTCAATACAAAATAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MIKDLGHGYKIIDNKFILCYESEVFKKFYKTIDFETFKITVTNAEYDNDGFASTIYFTDKNHVYIQSAFTAFAILEDAKS NDFKVIDIKKGYTFSNGNYFRHDDKMPFDLSKAKHLNNYHIQVGDKLYFGDVKLIENVDLESFTIPHPDLIGNLALDKNH VFFKGNIVPEANPNTFKVLEGCLDGTYYLECDNVFYAKDDKYAYYIRTINDEVKVIKTKSLTDFHFKVMDERGYAFDKEY SYYMGKRTKI
Sequences:
>Translated_250_residues MIKDLGHGYKIIDNKFILCYESEVFKKFYKTIDFETFKITVTNAEYDNDGFASTIYFTDKNHVYIQSAFTAFAILEDAKS NDFKVIDIKKGYTFSNGNYFRHDDKMPFDLSKAKHLNNYHIQVGDKLYFGDVKLIENVDLESFTIPHPDLIGNLALDKNH VFFKGNIVPEANPNTFKVLEGCLDGTYYLECDNVFYAKDDKYAYYIRTINDEVKVIKTKSLTDFHFKVMDERGYAFDKEY SYYMGKRTKI >Mature_250_residues MIKDLGHGYKIIDNKFILCYESEVFKKFYKTIDFETFKITVTNAEYDNDGFASTIYFTDKNHVYIQSAFTAFAILEDAKS NDFKVIDIKKGYTFSNGNYFRHDDKMPFDLSKAKHLNNYHIQVGDKLYFGDVKLIENVDLESFTIPHPDLIGNLALDKNH VFFKGNIVPEANPNTFKVLEGCLDGTYYLECDNVFYAKDDKYAYYIRTINDEVKVIKTKSLTDFHFKVMDERGYAFDKEY SYYMGKRTKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29273; Mature: 29273
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDLGHGYKIIDNKFILCYESEVFKKFYKTIDFETFKITVTNAEYDNDGFASTIYFTDK CCCCCCCCEEEECCCEEEEECHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECC NHVYIQSAFTAFAILEDAKSNDFKVIDIKKGYTFSNGNYFRHDDKMPFDLSKAKHLNNYH CEEEEEEHHEEEEEEECCCCCCEEEEEEECCEEECCCCEEEECCCCCCCCHHHHCCCCEE IQVGDKLYFGDVKLIENVDLESFTIPHPDLIGNLALDKNHVFFKGNIVPEANPNTFKVLE EEECCEEEECCEEEEECCCCCEEECCCCHHHEEEEECCCEEEEECCCCCCCCCCHHHHHH GCLDGTYYLECDNVFYAKDDKYAYYIRTINDEVKVIKTKSLTDFHFKVMDERGYAFDKEY HHCCCEEEEEECCEEEECCCCEEEEEEEECCCEEEEEECCCCEEEEEEEECCCCEECCCC SYYMGKRTKI CEECCEECCC >Mature Secondary Structure MIKDLGHGYKIIDNKFILCYESEVFKKFYKTIDFETFKITVTNAEYDNDGFASTIYFTDK CCCCCCCCEEEECCCEEEEECHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECC NHVYIQSAFTAFAILEDAKSNDFKVIDIKKGYTFSNGNYFRHDDKMPFDLSKAKHLNNYH CEEEEEEHHEEEEEEECCCCCCEEEEEEECCEEECCCCEEEECCCCCCCCHHHHCCCCEE IQVGDKLYFGDVKLIENVDLESFTIPHPDLIGNLALDKNHVFFKGNIVPEANPNTFKVLE EEECCEEEECCEEEEECCCCCEEECCCCHHHEEEEECCCEEEEECCCCCCCCCCHHHHHH GCLDGTYYLECDNVFYAKDDKYAYYIRTINDEVKVIKTKSLTDFHFKVMDERGYAFDKEY HHCCCEEEEEECCEEEECCCCEEEEEEEECCCEEEEEECCCCEEEEEEEECCCCEECCCC SYYMGKRTKI CEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA