Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301883

Identifier: 146301883

GI number: 146301883

Start: 4980207

End: 4980800

Strand: Reverse

Name: 146301883

Synonym: Fjoh_4147

Alternate gene names: NA

Gene position: 4980800-4980207 (Counterclockwise)

Preceding gene: 146301884

Following gene: 146301882

Centisome position: 81.69

GC content: 36.2

Gene sequence:

>594_bases
ATGGCGGTATATAAATTCGACGAAGTACTAAATGACCTAATGGATTATTTTATTCTGGGCGATCCAGATTATCTGCTTCA
ATACAAAATAGAAAATGACCTGCCGGATGATCTGCTGACGGAATTCACAACAGAAGAAACCGGAGATCAGGTTGTAGAAC
AAGGCGTAATTGTGCCAATGATAGGAATAGAAAATTATCCTTATACCATTTATTTCAATTTATCAGACGAAACGCCAGAG
TTGTTAAAAGCAGAAAATGAAGTACAGCACCAGCGTGACGGATATTGTTTAAAAGTTGTAAATGGCAGAATATACCTGTA
TACGATTCCGTATTTGAGAGATTTTACAGAAACCAAAGTCGGATTATTAAAGAAATACAAACACGCATCAATAGAACTGC
CAAACGGCTGGTATACAGTTACTATTCTGGCCGGATTAACCAAACAGCTTTTGGAAGCAGAAATGGTTTCGGGAAAAATA
GAAGAATTTGAAAGCATGGAACCTACTTTTGAATTTGTGCTAAAACCTTCTGCTGAAAAACCAGAGTATGCAGCTGATTT
TACATATCCATTTAAAGTTGAAATAGATGAATAG

Upstream 100 bases:

>100_bases
GCCTGACCGATTTTCATTTTAAAGTTATGGATGAAAGAGGATATGCTTTTGATAAGGAATACAGTTATTATATGGGAAAA
AGAACTAAAATCTAAAAACA

Downstream 100 bases:

>100_bases
ACAGATACCAATTGAAGAACTGAATCAGAATACTTTTTTCTGGAATTTTTATTTCTGCTGGTCAAGAGGCTATGATGAAA
AACAAGAAATAAATATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPMIGIENYPYTIYFNLSDETPE
LLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKVGLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKI
EEFESMEPTFEFVLKPSAEKPEYAADFTYPFKVEIDE

Sequences:

>Translated_197_residues
MAVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPMIGIENYPYTIYFNLSDETPE
LLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKVGLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKI
EEFESMEPTFEFVLKPSAEKPEYAADFTYPFKVEIDE
>Mature_196_residues
AVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPMIGIENYPYTIYFNLSDETPEL
LKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKVGLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKIE
EFESMEPTFEFVLKPSAEKPEYAADFTYPFKVEIDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22863; Mature: 22732

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPM
CCEEHHHHHHHHHHHHEECCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCCEEEE
IGIENYPYTIYFNLSDETPELLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKV
EECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCHHHHHHHHHH
GLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKIEEFESMEPTFEFVLKPSAEK
HHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCC
PEYAADFTYPFKVEIDE
CCCCCCCCCEEEEEECC
>Mature Secondary Structure 
AVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPM
CEEHHHHHHHHHHHHEECCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCCEEEE
IGIENYPYTIYFNLSDETPELLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKV
EECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCHHHHHHHHHH
GLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKIEEFESMEPTFEFVLKPSAEK
HHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCC
PEYAADFTYPFKVEIDE
CCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA