| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301880
Identifier: 146301880
GI number: 146301880
Start: 4978196
End: 4978810
Strand: Reverse
Name: 146301880
Synonym: Fjoh_4144
Alternate gene names: NA
Gene position: 4978810-4978196 (Counterclockwise)
Preceding gene: 146301881
Following gene: 146301877
Centisome position: 81.66
GC content: 35.77
Gene sequence:
>615_bases ATGAAAAAAATAATCTTATTACTAACATTGGCATTTTCTGCCTTTTTAGCTCAGGCTCAAACAGGAACAACACTTAAAGC CGGAGATACTGCACCAGATTTTAAACTGAAAAATGTTGACAACAAAGAAGTTTCTTTTGGGACTTTTAAAGATGCAAAAG GTTATATCGTAGTTTTTACCTGCAATACCTGTCCTTATGCAGTAGGTTACGAGCAAAGAATTATCGATTTAGATAAAAAA ATCAAACCACAGGGATATCCTGTAATTGCAATTAATCCAAATGATCCGGAAGCTTCTACAGCAGATACTTTCAGCAAAAT GCAGGATTTGGCAAAAGAAAAAAAATACCCTTTCCCATATTTATTTGATCCGGGACAAAAAATTACTGACGAATACGGAG CAAAACGCACACAGCACGTTTTCATTGTTTCTAAAACGGCAAAAGGAAACGTAGTAGAATATGTAGGCGCTATCGACAAC GATCCGGAAGGAACAAAAGCCGATAAAGTAAAATATGCAGAAGATGTAATTGCATCTTTAAAAACCGGTCAAAAACCGGC TGTAACACAAACCAAAGAAATTGGCTGTACAGTAAAAAGAAAAGCGAAAGCTTAA
Upstream 100 bases:
>100_bases TATTCCGGCAACACTTTTTATCAAAAACGATAAACGAAAATTTGTAGAAAGCGAATTTACCTACGAACAATTATTAACTG AATATAAAAAACTGTAAACC
Downstream 100 bases:
>100_bases TTACCAGAATTTAATTTGTTAAAACGCCTCAGGATATGAGGCGTTTTTTTATATAATCGTTTCGTTGATTCTCTGCTCTT TAAGTTCCAGTTCGGCAATA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Redoxin Domain Protein; Redoxin; Thiol-Disulfide Isomerase/Thioredoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase Or Thioredoxin; Peroxiredoxin; Thiol-Disulfide Isomerase; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thioredoxin; Thioredoxin Family Protein; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKKIILLLTLAFSAFLAQAQTGTTLKAGDTAPDFKLKNVDNKEVSFGTFKDAKGYIVVFTCNTCPYAVGYEQRIIDLDKK IKPQGYPVIAINPNDPEASTADTFSKMQDLAKEKKYPFPYLFDPGQKITDEYGAKRTQHVFIVSKTAKGNVVEYVGAIDN DPEGTKADKVKYAEDVIASLKTGQKPAVTQTKEIGCTVKRKAKA
Sequences:
>Translated_204_residues MKKIILLLTLAFSAFLAQAQTGTTLKAGDTAPDFKLKNVDNKEVSFGTFKDAKGYIVVFTCNTCPYAVGYEQRIIDLDKK IKPQGYPVIAINPNDPEASTADTFSKMQDLAKEKKYPFPYLFDPGQKITDEYGAKRTQHVFIVSKTAKGNVVEYVGAIDN DPEGTKADKVKYAEDVIASLKTGQKPAVTQTKEIGCTVKRKAKA >Mature_204_residues MKKIILLLTLAFSAFLAQAQTGTTLKAGDTAPDFKLKNVDNKEVSFGTFKDAKGYIVVFTCNTCPYAVGYEQRIIDLDKK IKPQGYPVIAINPNDPEASTADTFSKMQDLAKEKKYPFPYLFDPGQKITDEYGAKRTQHVFIVSKTAKGNVVEYVGAIDN DPEGTKADKVKYAEDVIASLKTGQKPAVTQTKEIGCTVKRKAKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22413; Mature: 22413
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILLLTLAFSAFLAQAQTGTTLKAGDTAPDFKLKNVDNKEVSFGTFKDAKGYIVVFT CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCEECCCCCCCCCEEEEEE CNTCPYAVGYEQRIIDLDKKIKPQGYPVIAINPNDPEASTADTFSKMQDLAKEKKYPFPY CCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCE LFDPGQKITDEYGAKRTQHVFIVSKTAKGNVVEYVGAIDNDPEGTKADKVKYAEDVIASL EECCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH KTGQKPAVTQTKEIGCTVKRKAKA HCCCCCCCCCHHHCCCEEECCCCC >Mature Secondary Structure MKKIILLLTLAFSAFLAQAQTGTTLKAGDTAPDFKLKNVDNKEVSFGTFKDAKGYIVVFT CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCEECCCCCCCCCEEEEEE CNTCPYAVGYEQRIIDLDKKIKPQGYPVIAINPNDPEASTADTFSKMQDLAKEKKYPFPY CCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCE LFDPGQKITDEYGAKRTQHVFIVSKTAKGNVVEYVGAIDNDPEGTKADKVKYAEDVIASL EECCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH KTGQKPAVTQTKEIGCTVKRKAKA HCCCCCCCCCHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA