| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301877
Identifier: 146301877
GI number: 146301877
Start: 4976243
End: 4976470
Strand: Reverse
Name: 146301877
Synonym: Fjoh_4141
Alternate gene names: NA
Gene position: 4976470-4976243 (Counterclockwise)
Preceding gene: 146301880
Following gene: 146301876
Centisome position: 81.62
GC content: 37.72
Gene sequence:
>228_bases ATGAGCAAATCAATTTTTTATCACGCAGGTTGTCCAGTTTGCGTAAGCGCAGAACACGACATTTTAAATTTAGTTAAAGA TGTTGAAGTAGTAAACATTGGTGAAGACAGATCCCGAATTGCTGAAGCTCAAAAAGCGGGTATAAAATCAGTTCCGGCTT TGGTAACGCCAAACGGAAATGTACTGCATATTAATTTTGGTGCTTCGATAGAAGAAGTAATTGGGTAA
Upstream 100 bases:
>100_bases GACCAGAAAACGCCCGAAAATGAAAAAACTGGATTATTTAATGGTTAGGTATCCTGCCTAATTTTGTCTCGGCAATGAAG TCAAATTAAAATCAAATCAA
Downstream 100 bases:
>100_bases ATATAAACGCCTCTTTGGAGTTTCTTCAAAGAGGTTTTTATAAGCATTGAATTGAAACAAAGGTTTTTTTTAAACACATA GAGACATAGTTTTTGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Hypothetic Protein
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSKSIFYHAGCPVCVSAEHDILNLVKDVEVVNIGEDRSRIAEAQKAGIKSVPALVTPNGNVLHINFGASIEEVIG
Sequences:
>Translated_75_residues MSKSIFYHAGCPVCVSAEHDILNLVKDVEVVNIGEDRSRIAEAQKAGIKSVPALVTPNGNVLHINFGASIEEVIG >Mature_74_residues SKSIFYHAGCPVCVSAEHDILNLVKDVEVVNIGEDRSRIAEAQKAGIKSVPALVTPNGNVLHINFGASIEEVIG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7972; Mature: 7841
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSIFYHAGCPVCVSAEHDILNLVKDVEVVNIGEDRSRIAEAQKAGIKSVPALVTPNGN CCCCEEEECCCCEEEECCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCEEECCCCC VLHINFGASIEEVIG EEEEECCCCHHHHCC >Mature Secondary Structure SKSIFYHAGCPVCVSAEHDILNLVKDVEVVNIGEDRSRIAEAQKAGIKSVPALVTPNGN CCCEEEECCCCEEEECCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCEEECCCCC VLHINFGASIEEVIG EEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA