Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301845

Identifier: 146301845

GI number: 146301845

Start: 4938713

End: 4938928

Strand: Direct

Name: 146301845

Synonym: Fjoh_4109

Alternate gene names: NA

Gene position: 4938713-4938928 (Clockwise)

Preceding gene: 146301844

Following gene: 146301851

Centisome position: 81.0

GC content: 34.72

Gene sequence:

>216_bases
GTGTCGAAACTTAAATTAAATAGAATAAAAGTTGTTTTAGTTGAAAACAATCGAACTAGTAAGGAATTAGCCAATCATTT
AGGCAAAACCGTATCAACTGTTTCGCGTTGGTGTACAAATGAAGCTCAGCCTTCTATTGAAACGCTTTATGAGGTTGCTA
AATATTTGAAGGTTGATATTCGGGAGTTGTTGCTTTCGACTGGGAACAAATCATAA

Upstream 100 bases:

>100_bases
ACTAAATTATTGTTTTAGGGCAATTTTGAGTATTTAAAGTATTCTTTTTATTATATTTAAATTATAAGATATTTGCATGA
AATGTCAATAAATCAACATT

Downstream 100 bases:

>100_bases
AAAAACGCTTTCTTGTAAGGAAAGCGTTTTTTTGTAAGTTGAAAATTCTAAAACTTTATGACAAAACTAAATCAGCGCTG
GTTAGCTTTACCTTTGGTTT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MSKLKLNRIKVVLVENNRTSKELANHLGKTVSTVSRWCTNEAQPSIETLYEVAKYLKVDIRELLLSTGNKS

Sequences:

>Translated_71_residues
MSKLKLNRIKVVLVENNRTSKELANHLGKTVSTVSRWCTNEAQPSIETLYEVAKYLKVDIRELLLSTGNKS
>Mature_70_residues
SKLKLNRIKVVLVENNRTSKELANHLGKTVSTVSRWCTNEAQPSIETLYEVAKYLKVDIRELLLSTGNKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8060; Mature: 7929

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKLNRIKVVLVENNRTSKELANHLGKTVSTVSRWCTNEAQPSIETLYEVAKYLKVDI
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RELLLSTGNKS
HHHHHHCCCCC
>Mature Secondary Structure 
SKLKLNRIKVVLVENNRTSKELANHLGKTVSTVSRWCTNEAQPSIETLYEVAKYLKVDI
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RELLLSTGNKS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA