Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301840

Identifier: 146301840

GI number: 146301840

Start: 4930085

End: 4931761

Strand: Reverse

Name: 146301840

Synonym: Fjoh_4104

Alternate gene names: NA

Gene position: 4931761-4930085 (Counterclockwise)

Preceding gene: 146301841

Following gene: 146301839

Centisome position: 80.89

GC content: 36.31

Gene sequence:

>1677_bases
ATGTTTTCAAAAGACACAAAATACAACTTCAAATTAAAAACCGCTTTCATAATGCTGGTAACTGTCTGCGTCCAAGCCAC
AGCACAAACCACAGCATGGAAACCAGCTTCATTTGAAATTGTAAAATCAAAATACAAGACATTCAAAACCGCACAATACG
CTCATGTATTTTCAGGAAGCAAACACAATATTGCCCGTTTAGCTCCAGAATTGCAAGGCTTAACAGGAATTGAACTTCCT
TTAGATAAATATAAAAATGAAAATAATGCTCCATTACAATTAAAATTTAAAGAACAAGTTCAGGTTTTGATTGGAGTTTT
TCAAGAAAATAATTCAGATTATCTTCAAGCTGATAAGTTTCAAAATGTCAAATTAATTTTAGAAAACGGATTGACCATTA
CAGGTTTACCTCCAGTAAATGTATATGCGATTTCTTTCTCAAAAGGAACACAAACATTAAATTTTGGAAAAGGATTATTT
GCAGTTTTAGGAGTTGTAAAAGCTTCTGAAAAACTAGAACCAAGAAACGCCAATTTTCCAGATGGAAAACTTTGGAATCC
AACTTTTATCGTAGAAGGATTTTCAGATGAAAAACCGCTTTTCGAAGTTATTGGCGGAGAAAATAAACCCGTTATTGATG
AAGGAATGTCTGGAACTGAAGGAATTCAGGGTGGTTTTGAAGGCGGACGCGTTGTAAAAGTTGGCGATATGTATCACATG
TTTCCAACTGAAAGAGCAGGTGAAAAAGGCGTTGATTACTATTACGATCGTGTAAAAACCAAAATCGGACATTGGACAAG
TAAAGATGCAATCCATTGGAAAAGAGAATCAACTATTTATCAAGCAAGCGGAACTTATGCCGTTACAGAAGATGATAATC
CAATGAATGATCGTCGTGCAGCTATTTGGTCTTATATGCCAATTTTCAACGAAAAAGCAAACAAATGGTATGGCTATTAT
TTGGCGTATACGGTAAGTAAAGAAATAGAACCAAATCATTCATTCGGAAGAATTTGGCGTTGTGAATCGACTGTAGATGG
AATCGACGGAATTGGTGGTCCTTATAAAAATATTGGAATCATTATGGAACCAGGATTAGATTCTCTACCATGGGAAGGTC
GTCAGGGTGTTGCTTCCTTTTTTCCTTATCAGGTAGGCGATAAATACTTCGGATTTTACAGCGGTGCGTATCCGTTCAAT
TCATGGGCAGATTATCCGAAAAAATCAGGAAAGGGATGGTTTGTTGCATTAGCTGAATCAAAAAGTTTAGAAGGTCCTTG
GTTGAGAATGAATAAAGGTTTGGAACCAATTAAGACCATGCATCCGTTATTCGTAGAAAATCCAATTGTAAGTCAGTTGC
CAAACGGAATGTACATCGCGATTTTCGACGGAGGGCCAGACGGCTGGGGGCATCATTTACCAAATATGATTGCGTATTCA
TTATCTGCAGACGGAATCAATTGGGCAGAAGCACATTATTTACCAATAGAAACTAAAGTCGATAAATGGTGGGATATTAT
GCGAACGCCTTTGTGTTTAATCCCAGAAGGAAATGACGTTTACACTATAGTCTATAACGCCATCGACCTAAAAAGAAGAT
TTCATCCAACAGGAATGGTAAAGGTAAAATTGAATAAAGATGTGATGGAGTCTAAATTAAAGGAATTGAAAAAATAA

Upstream 100 bases:

>100_bases
ACGAAGCAACCTCACTATGATTGCACAAAGCTTGATATAGTAAATGTGATTGCTCGTTCCTCGCAATGACGCAAAATCAG
AACCAAAAAATAAAAAACCA

Downstream 100 bases:

>100_bases
ATTAAAGTTTCCCGCAGATTTTGCAGATCAGGCAGATAAAAAAATCAGCTAAATCAGCAAAATCTGCGAGAGAAACAAAA
TAAAATCCGCGTCATTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MFSKDTKYNFKLKTAFIMLVTVCVQATAQTTAWKPASFEIVKSKYKTFKTAQYAHVFSGSKHNIARLAPELQGLTGIELP
LDKYKNENNAPLQLKFKEQVQVLIGVFQENNSDYLQADKFQNVKLILENGLTITGLPPVNVYAISFSKGTQTLNFGKGLF
AVLGVVKASEKLEPRNANFPDGKLWNPTFIVEGFSDEKPLFEVIGGENKPVIDEGMSGTEGIQGGFEGGRVVKVGDMYHM
FPTERAGEKGVDYYYDRVKTKIGHWTSKDAIHWKRESTIYQASGTYAVTEDDNPMNDRRAAIWSYMPIFNEKANKWYGYY
LAYTVSKEIEPNHSFGRIWRCESTVDGIDGIGGPYKNIGIIMEPGLDSLPWEGRQGVASFFPYQVGDKYFGFYSGAYPFN
SWADYPKKSGKGWFVALAESKSLEGPWLRMNKGLEPIKTMHPLFVENPIVSQLPNGMYIAIFDGGPDGWGHHLPNMIAYS
LSADGINWAEAHYLPIETKVDKWWDIMRTPLCLIPEGNDVYTIVYNAIDLKRRFHPTGMVKVKLNKDVMESKLKELKK

Sequences:

>Translated_558_residues
MFSKDTKYNFKLKTAFIMLVTVCVQATAQTTAWKPASFEIVKSKYKTFKTAQYAHVFSGSKHNIARLAPELQGLTGIELP
LDKYKNENNAPLQLKFKEQVQVLIGVFQENNSDYLQADKFQNVKLILENGLTITGLPPVNVYAISFSKGTQTLNFGKGLF
AVLGVVKASEKLEPRNANFPDGKLWNPTFIVEGFSDEKPLFEVIGGENKPVIDEGMSGTEGIQGGFEGGRVVKVGDMYHM
FPTERAGEKGVDYYYDRVKTKIGHWTSKDAIHWKRESTIYQASGTYAVTEDDNPMNDRRAAIWSYMPIFNEKANKWYGYY
LAYTVSKEIEPNHSFGRIWRCESTVDGIDGIGGPYKNIGIIMEPGLDSLPWEGRQGVASFFPYQVGDKYFGFYSGAYPFN
SWADYPKKSGKGWFVALAESKSLEGPWLRMNKGLEPIKTMHPLFVENPIVSQLPNGMYIAIFDGGPDGWGHHLPNMIAYS
LSADGINWAEAHYLPIETKVDKWWDIMRTPLCLIPEGNDVYTIVYNAIDLKRRFHPTGMVKVKLNKDVMESKLKELKK
>Mature_558_residues
MFSKDTKYNFKLKTAFIMLVTVCVQATAQTTAWKPASFEIVKSKYKTFKTAQYAHVFSGSKHNIARLAPELQGLTGIELP
LDKYKNENNAPLQLKFKEQVQVLIGVFQENNSDYLQADKFQNVKLILENGLTITGLPPVNVYAISFSKGTQTLNFGKGLF
AVLGVVKASEKLEPRNANFPDGKLWNPTFIVEGFSDEKPLFEVIGGENKPVIDEGMSGTEGIQGGFEGGRVVKVGDMYHM
FPTERAGEKGVDYYYDRVKTKIGHWTSKDAIHWKRESTIYQASGTYAVTEDDNPMNDRRAAIWSYMPIFNEKANKWYGYY
LAYTVSKEIEPNHSFGRIWRCESTVDGIDGIGGPYKNIGIIMEPGLDSLPWEGRQGVASFFPYQVGDKYFGFYSGAYPFN
SWADYPKKSGKGWFVALAESKSLEGPWLRMNKGLEPIKTMHPLFVENPIVSQLPNGMYIAIFDGGPDGWGHHLPNMIAYS
LSADGINWAEAHYLPIETKVDKWWDIMRTPLCLIPEGNDVYTIVYNAIDLKRRFHPTGMVKVKLNKDVMESKLKELKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63019; Mature: 63019

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKDTKYNFKLKTAFIMLVTVCVQATAQTTAWKPASFEIVKSKYKTFKTAQYAHVFSGS
CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
KHNIARLAPELQGLTGIELPLDKYKNENNAPLQLKFKEQVQVLIGVFQENNSDYLQADKF
CCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEECCCC
QNVKLILENGLTITGLPPVNVYAISFSKGTQTLNFGKGLFAVLGVVKASEKLEPRNANFP
CCEEEEEECCCEEECCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCC
DGKLWNPTFIVEGFSDEKPLFEVIGGENKPVIDEGMSGTEGIQGGFEGGRVVKVGDMYHM
CCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEE
FPTERAGEKGVDYYYDRVKTKIGHWTSKDAIHWKRESTIYQASGTYAVTEDDNPMNDRRA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCEEEECCCCCCCCHHH
AIWSYMPIFNEKANKWYGYYLAYTVSKEIEPNHSFGRIWRCESTVDGIDGIGGPYKNIGI
HHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCE
IMEPGLDSLPWEGRQGVASFFPYQVGDKYFGFYSGAYPFNSWADYPKKSGKGWFVALAES
EECCCCCCCCCCCCCCHHHHCCHHCCCCEEEEECCCCCCCCHHCCCCCCCCEEEEEEECC
KSLEGPWLRMNKGLEPIKTMHPLFVENPIVSQLPNGMYIAIFDGGPDGWGHHLPNMIAYS
CCCCCCEEEECCCCCHHHHHCCHHHCCCHHHHCCCCEEEEEECCCCCCCHHHCCHHEEEE
LSADGINWAEAHYLPIETKVDKWWDIMRTPLCLIPEGNDVYTIVYNAIDLKRRFHPTGMV
ECCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHCCCCCEE
KVKLNKDVMESKLKELKK
EEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MFSKDTKYNFKLKTAFIMLVTVCVQATAQTTAWKPASFEIVKSKYKTFKTAQYAHVFSGS
CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
KHNIARLAPELQGLTGIELPLDKYKNENNAPLQLKFKEQVQVLIGVFQENNSDYLQADKF
CCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEECCCC
QNVKLILENGLTITGLPPVNVYAISFSKGTQTLNFGKGLFAVLGVVKASEKLEPRNANFP
CCEEEEEECCCEEECCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCC
DGKLWNPTFIVEGFSDEKPLFEVIGGENKPVIDEGMSGTEGIQGGFEGGRVVKVGDMYHM
CCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEE
FPTERAGEKGVDYYYDRVKTKIGHWTSKDAIHWKRESTIYQASGTYAVTEDDNPMNDRRA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCEEEECCCCCCCCHHH
AIWSYMPIFNEKANKWYGYYLAYTVSKEIEPNHSFGRIWRCESTVDGIDGIGGPYKNIGI
HHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCE
IMEPGLDSLPWEGRQGVASFFPYQVGDKYFGFYSGAYPFNSWADYPKKSGKGWFVALAES
EECCCCCCCCCCCCCCHHHHCCHHCCCCEEEEECCCCCCCCHHCCCCCCCCEEEEEEECC
KSLEGPWLRMNKGLEPIKTMHPLFVENPIVSQLPNGMYIAIFDGGPDGWGHHLPNMIAYS
CCCCCCEEEECCCCCHHHHHCCHHHCCCHHHHCCCCEEEEEECCCCCCCHHHCCHHEEEE
LSADGINWAEAHYLPIETKVDKWWDIMRTPLCLIPEGNDVYTIVYNAIDLKRRFHPTGMV
ECCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHCCCCCEE
KVKLNKDVMESKLKELKK
EEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA