| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301839
Identifier: 146301839
GI number: 146301839
Start: 4928840
End: 4929964
Strand: Reverse
Name: 146301839
Synonym: Fjoh_4103
Alternate gene names: NA
Gene position: 4929964-4928840 (Counterclockwise)
Preceding gene: 146301840
Following gene: 146301838
Centisome position: 80.86
GC content: 37.6
Gene sequence:
>1125_bases ATGAAAATTAAATATCTAATCCTAGCCATTTCAGCACTAGCCATAACTAGCTGTGCAACCAAATACAAGAAAAGAGAAAT TACCGACAACGTAATGCAGGAGATTTACGAAGAAATCAAAACTCCTTATAAATACGGTTTGGTGATGGTTCCTACCGATA ACTCATACAAAATGGATTGTCCAAGTGTTTTTAGAAAAGACGGAAAATGGTATATGACCTATTTAATTTATGATGGAAGA GGTTACGAAACTTGGCTTGCGGAAAGCGACAATCTTTTAGATTGGAAACATCTGGGAAAAGTAATGTCCTTCTCAGAAAA TGAAAAACACTGGGATGTGAACCAAAAAGCAGGGTATATTTCGTTACAAGATTTGACTTGGGGCGGAAGCTACGAATGGG AAAAATACGATGACAAATACTGGATGAGTTATTTTGGCGGAGACAGCAAAGGTTATGAAGCAGGAGTATTATCAATCGGA ATGGCATATACCAAAGAAGCACCGACAAAACCACATGAATTCCAAAGATTAGAAAGTCCGGTTTTGACTCCAAAAGACAA AGAGGCCAGATGGTGGGATAATAGTACGATGTACAAAAACAGTGTAATTCGTGATAAAGATAAATTGACAGGACACAATT TTATCATGTATTATAATGCCCGCGGTGATAGTATAAATCCTGCGAAAGGAGCAGAACGTATTGCGATGGCAGTATCAAAC GACATGAAAACATGGAAGCGTTATGGCGATAAACCATTAATCAATCATCATAAAGGAATTTCGGGTGATGCTTATATTCA GCGAATTAATGATACTTGGGTAATGTTCTATTTTGGAGCTTTCTGGACGGGTTGGAATCAAGGTGCATTTAACCGTTTTG CCGTTTCGAATGATTTGGTAAACTGGACGGACTGGAAAGGCGACAATTTAGTTAAATCATCTGAACCATACGATGATATG TTCGCGCATAAATCATTTGTAGTTAAACATGATGGGATTGTGTATCATTTTTACTGCGCCGTTAACAAAGCAGAACAAAG AGGAATCGCAATTGCAACGTCCAAAGATTTAGGAAAAAGCAAATTGAATTTTGTAGCACCACCGGAGAAAAAGAAGAAGA ATTAG
Upstream 100 bases:
>100_bases TTGCAGATCAGGCAGATAAAAAAATCAGCTAAATCAGCAAAATCTGCGAGAGAAACAAAATAAAATCCGCGTCATTCGCG TACCAAAATATAACCAAAAA
Downstream 100 bases:
>100_bases GAGGAAAGTACAAAGTACAAAGAATTAAGATACAGTACATTTTAAACCTGACAGGTTTTTAAAACCTGTCAGGTTTAATT ACACAAAAGTAAATAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDCPSVFRKDGKWYMTYLIYDGR GYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYISLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIG MAYTKEAPTKPHEFQRLESPVLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLVNWTDWKGDNLVKSSEPYDDM FAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKSKLNFVAPPEKKKKN
Sequences:
>Translated_374_residues MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDCPSVFRKDGKWYMTYLIYDGR GYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYISLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIG MAYTKEAPTKPHEFQRLESPVLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLVNWTDWKGDNLVKSSEPYDDM FAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKSKLNFVAPPEKKKKN >Mature_374_residues MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDCPSVFRKDGKWYMTYLIYDGR GYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYISLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIG MAYTKEAPTKPHEFQRLESPVLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLVNWTDWKGDNLVKSSEPYDDM FAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKSKLNFVAPPEKKKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43452; Mature: 43452
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDC CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCC PSVFRKDGKWYMTYLIYDGRGYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYI HHHHHCCCCEEEEEEEECCCCCEEEECCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCEE SLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIGMAYTKEAPTKPHEFQRLESP EEEEEECCCCCCCCCCCCCEEEHEECCCCCCCCCCEEEECHHHCCCCCCCCHHHHHHCCC VLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN CCCCCCCCCEECCCCCEECCCHHCCCHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLV HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCEEEECCCCC NWTDWKGDNLVKSSEPYDDMFAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKS CCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCEEEEEEEEECHHHHCCEEEEECCCCCCC KLNFVAPPEKKKKN CCCCCCCCHHHCCC >Mature Secondary Structure MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDC CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCC PSVFRKDGKWYMTYLIYDGRGYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYI HHHHHCCCCEEEEEEEECCCCCEEEECCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCEE SLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIGMAYTKEAPTKPHEFQRLESP EEEEEECCCCCCCCCCCCCEEEHEECCCCCCCCCCEEEECHHHCCCCCCCCHHHHHHCCC VLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN CCCCCCCCCEECCCCCEECCCHHCCCHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLV HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCEEEECCCCC NWTDWKGDNLVKSSEPYDDMFAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKS CCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCEEEEEEEEECHHHHCCEEEEECCCCCCC KLNFVAPPEKKKKN CCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA