Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301839

Identifier: 146301839

GI number: 146301839

Start: 4928840

End: 4929964

Strand: Reverse

Name: 146301839

Synonym: Fjoh_4103

Alternate gene names: NA

Gene position: 4929964-4928840 (Counterclockwise)

Preceding gene: 146301840

Following gene: 146301838

Centisome position: 80.86

GC content: 37.6

Gene sequence:

>1125_bases
ATGAAAATTAAATATCTAATCCTAGCCATTTCAGCACTAGCCATAACTAGCTGTGCAACCAAATACAAGAAAAGAGAAAT
TACCGACAACGTAATGCAGGAGATTTACGAAGAAATCAAAACTCCTTATAAATACGGTTTGGTGATGGTTCCTACCGATA
ACTCATACAAAATGGATTGTCCAAGTGTTTTTAGAAAAGACGGAAAATGGTATATGACCTATTTAATTTATGATGGAAGA
GGTTACGAAACTTGGCTTGCGGAAAGCGACAATCTTTTAGATTGGAAACATCTGGGAAAAGTAATGTCCTTCTCAGAAAA
TGAAAAACACTGGGATGTGAACCAAAAAGCAGGGTATATTTCGTTACAAGATTTGACTTGGGGCGGAAGCTACGAATGGG
AAAAATACGATGACAAATACTGGATGAGTTATTTTGGCGGAGACAGCAAAGGTTATGAAGCAGGAGTATTATCAATCGGA
ATGGCATATACCAAAGAAGCACCGACAAAACCACATGAATTCCAAAGATTAGAAAGTCCGGTTTTGACTCCAAAAGACAA
AGAGGCCAGATGGTGGGATAATAGTACGATGTACAAAAACAGTGTAATTCGTGATAAAGATAAATTGACAGGACACAATT
TTATCATGTATTATAATGCCCGCGGTGATAGTATAAATCCTGCGAAAGGAGCAGAACGTATTGCGATGGCAGTATCAAAC
GACATGAAAACATGGAAGCGTTATGGCGATAAACCATTAATCAATCATCATAAAGGAATTTCGGGTGATGCTTATATTCA
GCGAATTAATGATACTTGGGTAATGTTCTATTTTGGAGCTTTCTGGACGGGTTGGAATCAAGGTGCATTTAACCGTTTTG
CCGTTTCGAATGATTTGGTAAACTGGACGGACTGGAAAGGCGACAATTTAGTTAAATCATCTGAACCATACGATGATATG
TTCGCGCATAAATCATTTGTAGTTAAACATGATGGGATTGTGTATCATTTTTACTGCGCCGTTAACAAAGCAGAACAAAG
AGGAATCGCAATTGCAACGTCCAAAGATTTAGGAAAAAGCAAATTGAATTTTGTAGCACCACCGGAGAAAAAGAAGAAGA
ATTAG

Upstream 100 bases:

>100_bases
TTGCAGATCAGGCAGATAAAAAAATCAGCTAAATCAGCAAAATCTGCGAGAGAAACAAAATAAAATCCGCGTCATTCGCG
TACCAAAATATAACCAAAAA

Downstream 100 bases:

>100_bases
GAGGAAAGTACAAAGTACAAAGAATTAAGATACAGTACATTTTAAACCTGACAGGTTTTTAAAACCTGTCAGGTTTAATT
ACACAAAAGTAAATAAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDCPSVFRKDGKWYMTYLIYDGR
GYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYISLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIG
MAYTKEAPTKPHEFQRLESPVLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN
DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLVNWTDWKGDNLVKSSEPYDDM
FAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKSKLNFVAPPEKKKKN

Sequences:

>Translated_374_residues
MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDCPSVFRKDGKWYMTYLIYDGR
GYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYISLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIG
MAYTKEAPTKPHEFQRLESPVLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN
DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLVNWTDWKGDNLVKSSEPYDDM
FAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKSKLNFVAPPEKKKKN
>Mature_374_residues
MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDCPSVFRKDGKWYMTYLIYDGR
GYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYISLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIG
MAYTKEAPTKPHEFQRLESPVLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN
DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLVNWTDWKGDNLVKSSEPYDDM
FAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKSKLNFVAPPEKKKKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43452; Mature: 43452

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDC
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCC
PSVFRKDGKWYMTYLIYDGRGYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYI
HHHHHCCCCEEEEEEEECCCCCEEEECCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCEE
SLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIGMAYTKEAPTKPHEFQRLESP
EEEEEECCCCCCCCCCCCCEEEHEECCCCCCCCCCEEEECHHHCCCCCCCCHHHHHHCCC
VLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN
CCCCCCCCCEECCCCCEECCCHHCCCHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLV
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCEEEECCCCC
NWTDWKGDNLVKSSEPYDDMFAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKS
CCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCEEEEEEEEECHHHHCCEEEEECCCCCCC
KLNFVAPPEKKKKN
CCCCCCCCHHHCCC
>Mature Secondary Structure
MKIKYLILAISALAITSCATKYKKREITDNVMQEIYEEIKTPYKYGLVMVPTDNSYKMDC
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCC
PSVFRKDGKWYMTYLIYDGRGYETWLAESDNLLDWKHLGKVMSFSENEKHWDVNQKAGYI
HHHHHCCCCEEEEEEEECCCCCEEEECCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCEE
SLQDLTWGGSYEWEKYDDKYWMSYFGGDSKGYEAGVLSIGMAYTKEAPTKPHEFQRLESP
EEEEEECCCCCCCCCCCCCEEEHEECCCCCCCCCCEEEECHHHCCCCCCCCHHHHHHCCC
VLTPKDKEARWWDNSTMYKNSVIRDKDKLTGHNFIMYYNARGDSINPAKGAERIAMAVSN
CCCCCCCCCEECCCCCEECCCHHCCCHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
DMKTWKRYGDKPLINHHKGISGDAYIQRINDTWVMFYFGAFWTGWNQGAFNRFAVSNDLV
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCEEEECCCCC
NWTDWKGDNLVKSSEPYDDMFAHKSFVVKHDGIVYHFYCAVNKAEQRGIAIATSKDLGKS
CCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCEEEEEEEEECHHHHCCEEEEECCCCCCC
KLNFVAPPEKKKKN
CCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA