| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301835
Identifier: 146301835
GI number: 146301835
Start: 4917463
End: 4919847
Strand: Reverse
Name: 146301835
Synonym: Fjoh_4099
Alternate gene names: NA
Gene position: 4919847-4917463 (Counterclockwise)
Preceding gene: 146301836
Following gene: 146301834
Centisome position: 80.69
GC content: 35.26
Gene sequence:
>2385_bases ATGCAACGAAGATTTCTCCTTCGTCGAAATGACAAAAAAACTTTAAAAAGAGTAAAATTGAAATACATTAAATACATACT TCTCTTCACAACGCTTTGCCTCAAAGCGCAAATTCCTACGCTCGATAATTACAATCAGGTTTGGACAACGCAAAGCAACA ATTCATCAGAATCTATGCCTTTGGGTGGCGGTGATATTGGTATGAATGTTTGGGTCGAGAAAGGTGATTTGTATTTCTAT TTTTCGCGAAGCGGCACTTTTGATGAACATAATACTTTATTGAAACTAGGAAGAGTAAAAGTGACTTTAAGTCCGAATCC GTTTGAAGGAAAAGATGGTTTTCATCAGGAATTAAAGCTCAAAGATGGTTATGTTTTAGTTGGGCAAAACAACACAAAAA TAAAACTTTGGGTTGATGTTTTTAAACCGATTATTCATGTTGATTTAGAAAGTAAAAATCCGTTGAAAATGACTGCTTCT TACGAAAGCTGGCGTTATCAAAATCGTTATCCAAAAGGAAAAGAAAACAACGCTAATTCATATAAATGGGCGCCTCAAGG AGAACTTATTACATATAAAGATTCTATTTCGTTTGAAAATAATGGTGTCAAATTTTATCACAGAAATCGAGAAAATACTG TTTTTGATGTAGCGGTAAAACAGCAGAAAATGGAATCGGTTAAAGACCAAATGCTGAACCCGATTGCGAATCTGACTTTT GGTGGATTCATGAAAGGCGATAACTTAAAACCAGACGGAACATATCTTGGGAAATATCAGGATACGGATTTTAAAGGCTT TACTTTATCAAGCATAAAACCATCCAAAAAACAGGCATTAGAAATTTATTTAAACACCAGTCAATCTGATTTTGTTGCTT GGAATAATGGATTGAAAAGTTTCATTTCGGCAAATAAAAACACAGCAAAACAATCCGAAAAAAACACTCAAAAATGGTGG AATAATTTCTGGAACCGTAGTTTTATTTTTACTCAAAAAAATCAGTCAACTGCAAAAGATTCGGTGTATCAAATTGGACA GAATTATCAGTTGTTCAGATATATGCTTGGATGCAATGCGTACGGAAAATATCCAACCAAATTTAACGGCGGACTTTTTA CCGTTGATCCTGTCCATACTAATAAAGACCTGAATTTCACACCCGATTTTAGAAATTGGGGAGGAGGAACTATGACAGCT CAAAATCAGCGATTAGTTTATTTTCCGATGGTGAAAAGCGGTGATTTTGATATGATGAAATCACAATTGGATTATTACGT AAGTCTTCAAAAAAATGCCGAATTACGTTCTAAAGTATATTGGAAACATAACGGATCTTCATTCACAGAACAATTAGAAA ACTTTGGACTTCCAAATCCAGCTGAATACGAATGGACACGTCCCGCAGATTACGATCCGGGAATGGAATATAATGCGTGG CTAGAATATGAATGGGATACGGTTTTAGAATTCTGCCAAATGATGTTACAGCAAAAAGAATATGCTGGAGAAGACATTCA AAAATACAACCAATTCATTATAAGCTGTCTTAGATTTTTCGATGAACATTATCAATATTTAGCAAAGCAGAGAGGCAGAA AAGCTTTGGATGGAAATGGAAAATTAATTCTTTTTCCGGGTTCGGGAGCTGAAACTTATAAAATGGCGAATAATGCCAAT AGCACGATTTCGGCTTTGCAAGTTATTACAGAAAACCTTTTAAACCTTTCGGGTAACCACTTGTCAAAAGAAGAGTCAGA ATATTTAAAAGCATTTCAAACGAGAATTCCGCCTTTGAATTTTGGGCAGATTGAAAATCATAAAGTTTTACTTCCTGCTA AAACTTGGGAAAGAGTGAATAATTCAGAAGTTCCGCAATTATATCCCGTTTATCCGTGGGGAATTTACGGCGTAGGAAAA CCTGATTTAAAAACGGCTTTAAATACTTGGAAATACGATTCTGATGCATTGAAATTTAGAAGTCATGTAGGTTGGAAACA GGATAATATTTTCTCCGCTCGTTTGGGTTTAACCGAAGAAGCGATGAAATACAATACACTAAAAATGGCCAGTTCAGAAA GACGTTTTCCAGCATTTTGGGGTCCTGGATTTGACTGGGTTCCAGATCATAATTGGGGCGGATCGGGGATGATTGGCATG CAGGAAATGCTTTTGCAGGAAGCAGACGGGAAAATCTATCTTTTTCCAGCATGGCCAAAAGATTGGAACGTTCATTTTAA ATTACATGCCAAACAAAATACAACAATTGAAGCCGAACTCATGAATGGAGAATTTAAGGTTTTAAAAGTAATTCCAGAAG AAAGAAAAAAAGACATTATAAATCTGCTAGGAAAATCTGAAGCAGAGAAAACAAAATTAAACTAA
Upstream 100 bases:
>100_bases TAATTGTTAATTGTAAATGATTAATGATGAGTTTAACGACTAGTTTGTCATTTCGACGAAGGAGGAATCTTCGCAAGTAG CTCCGCAATCTTTGTCGATC
Downstream 100 bases:
>100_bases CTATTGCTAATTAAAATGATAAAGAAATTAATAAGCGGTGCTGTTTTGTCCTTGCTTTTGACCACAAACGGACAAGCACA ATCAGTTGCAAATACTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMPLGGGDIGMNVWVEKGDLYFY FSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKLKDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTAS YESWRYQNRYPKGKENNANSYKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKSFISANKNTAKQSEKNTQKWW NNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNAYGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTA QNQRLVYFPMVKSGDFDMMKSQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNGKLILFPGSGAETYKMANNAN STISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLNFGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGK PDLKTALNTWKYDSDALKFRSHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDIINLLGKSEAEKTKLN
Sequences:
>Translated_794_residues MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMPLGGGDIGMNVWVEKGDLYFY FSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKLKDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTAS YESWRYQNRYPKGKENNANSYKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKSFISANKNTAKQSEKNTQKWW NNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNAYGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTA QNQRLVYFPMVKSGDFDMMKSQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNGKLILFPGSGAETYKMANNAN STISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLNFGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGK PDLKTALNTWKYDSDALKFRSHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDIINLLGKSEAEKTKLN >Mature_794_residues MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMPLGGGDIGMNVWVEKGDLYFY FSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKLKDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTAS YESWRYQNRYPKGKENNANSYKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKSFISANKNTAKQSEKNTQKWW NNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNAYGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTA QNQRLVYFPMVKSGDFDMMKSQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNGKLILFPGSGAETYKMANNAN STISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLNFGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGK PDLKTALNTWKYDSDALKFRSHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDIINLLGKSEAEKTKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92105; Mature: 92105
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMP CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC LGGGDIGMNVWVEKGDLYFYFSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKL CCCCCCCEEEEEECCCEEEEECCCCCCCHHHHEEEECEEEEEECCCCCCCCCCCCHHEEE KDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTASYESWRYQNRYPKGKENNANS CCCEEEECCCCCEEEEEHHHHCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCCCCCCC YKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF EEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKS CCEECCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHH FISANKNTAKQSEKNTQKWWNNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNA HHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCC YGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTAQNQRLVYFPMVKSGDFDMMK CCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCHHHHH SQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW HHCCEEEEECCCCCCHHEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNG EEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KLILFPGSGAETYKMANNANSTISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLN EEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC FGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGKPDLKTALNTWKYDSDALKFR CCCCCCCEEEEECHHHHHCCCCCCCEEEECCCCCEECCCCHHHHHHHHHCCCCCHHHHHH SHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM HHCCCCCCCEEEEECCCCHHHHHHHHEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHH QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDII HHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHH NLLGKSEAEKTKLN HHHCCCCCHHCCCC >Mature Secondary Structure MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMP CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC LGGGDIGMNVWVEKGDLYFYFSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKL CCCCCCCEEEEEECCCEEEEECCCCCCCHHHHEEEECEEEEEECCCCCCCCCCCCHHEEE KDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTASYESWRYQNRYPKGKENNANS CCCEEEECCCCCEEEEEHHHHCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCCCCCCC YKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF EEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKS CCEECCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHH FISANKNTAKQSEKNTQKWWNNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNA HHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCC YGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTAQNQRLVYFPMVKSGDFDMMK CCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCHHHHH SQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW HHCCEEEEECCCCCCHHEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNG EEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KLILFPGSGAETYKMANNANSTISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLN EEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC FGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGKPDLKTALNTWKYDSDALKFR CCCCCCCEEEEECHHHHHCCCCCCCEEEECCCCCEECCCCHHHHHHHHHCCCCCHHHHHH SHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM HHCCCCCCCEEEEECCCCHHHHHHHHEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHH QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDII HHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHH NLLGKSEAEKTKLN HHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA