| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301836
Identifier: 146301836
GI number: 146301836
Start: 4919952
End: 4921376
Strand: Reverse
Name: 146301836
Synonym: Fjoh_4100
Alternate gene names: NA
Gene position: 4921376-4919952 (Counterclockwise)
Preceding gene: 146301837
Following gene: 146301835
Centisome position: 80.72
GC content: 37.75
Gene sequence:
>1425_bases ATGAAAAAAACAATTATTGCATTATTAACGATTTTAGCGAGTCTTCAAATCAATGCTAAAATCAAATTGCCAGCATTGTT CTCTGACAACATGATGTTGCAGCAAAAATCGAATGCACTCATTTGGGGCTGGGCAGAAAAGAACGCCAACATTGTAATCA AAACTTCTTGGGATTCTAAAACCTACAAGGTAAAAGCAGACGCTTCAGGTAAATGGAAAACAGAATTAAAAACGGTTTCA TTTGGTGGCCCATACACAATTGAAGTATCGGAAGGAAACGAAAAAGTAACTATCAAAAATGTCTTGTTGGGTGAAGTTTG GCTTTGTTCGGGACAATCTAATATGGAAATGCCGTTGAAAGGATTTCAAGGGCAACCAGTGAAAAACGGAAACGAAATCA TCGTAAGATCAGCCAATAAAAACATTCGTTTAATTACGATTCCAAGAGCAACAGTTTTAGAACCTTTGCAAGATTTTGAA GGAAAATGGGAAGAAGCTTCCCCAAAATCAACCTCCAATTTTAGTGCGACGGCTTGGTATTTTGGTTCGCTTTTGCAGGA AGTTTTAAATGTTCCGGTTGGTTTGATTCACGTTTCATACGGAGGTTCAAGCATGGAAGCTTGGATGAATCAGGAAATGC TGAAGGATTTTGCAAGCGCTAAAATTCCGACCACAAAAGAAGAATTGGCAAAAGACCCAAATCGTGTACCAACGACTTTG TTTAACGGAATGCTTTCGCCTGTAATTGGTTACGGAATAAAAGGTTGTATCTGGTATCAGGGTGAATCAAATTACGAAAG AGCTAGTGAATATACTGCTTTAATGAAGAAAATGGTAAGCAGTTGGAGAGCGTTGTGGAATCAAGGAGATTTTCCTTTTT ATTTTGCTCAGATTGCACCGTTTAATTACGCTTCATTTCATCCAAAAGATTATTTAGAAAAATACAATTCAGCTTATTTG AGAGAGGCGCAATTAAAAGCTTCAAAGGAAATTCCGAATTCAGCAATGGCAGTTTTAATGGATGTTGGAGAAGAAAACAA TATTCATCCAATGGATAAAGAAAAAGGCGGAGACAGATTGGCTTTTCAGGCTTTGGCCAGAACGTACGGAATTGAAGGTT TCGAATTCGAAAGTCCGAAATACAAATCAATGGAAATAAAAGACGGCGCTGTAACGGTTTCTTTTGATGATGTTAATAAC GGAATTACATCTTATGACAAAGAAGTTTTAGGTTTTGAAATAGCGGGAGCAGACAAAGTTTTTTATCCAGCAAAAACTGT GGTAAGAAGAAAATCGGTGGTTCTGACTTCGGATAAAGTGAAAAATCCTGTTGCAGTTCGTTATTTATGGAAAGATTTCG CTAAAGCGGAATTGTTTAGCGCAGGCGGTTTGCCGGTTTCTTCGTTTAGAACAGACGAATGGTGA
Upstream 100 bases:
>100_bases GCTAAAGCTGGAGGCAATTGAAAAATAAATATTCGCCACAGATTAAAGGATTCCCACAGATTAATAATCCTTTTAATCTG TGGCAAAAAAAAATAAAAAA
Downstream 100 bases:
>100_bases TTTATAATTGTTAATTGTAAATGATTAATGATGAGTTTAACGACTAGTTTGTCATTTCGACGAAGGAGGAATCTTCGCAA GTAGCTCCGCAATCTTTGTC
Product: sialate O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase; Sialate O-Acetylesterase Homolog; Glycosyl Hydrolase
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKKTIIALLTILASLQINAKIKLPALFSDNMMLQQKSNALIWGWAEKNANIVIKTSWDSKTYKVKADASGKWKTELKTVS FGGPYTIEVSEGNEKVTIKNVLLGEVWLCSGQSNMEMPLKGFQGQPVKNGNEIIVRSANKNIRLITIPRATVLEPLQDFE GKWEEASPKSTSNFSATAWYFGSLLQEVLNVPVGLIHVSYGGSSMEAWMNQEMLKDFASAKIPTTKEELAKDPNRVPTTL FNGMLSPVIGYGIKGCIWYQGESNYERASEYTALMKKMVSSWRALWNQGDFPFYFAQIAPFNYASFHPKDYLEKYNSAYL REAQLKASKEIPNSAMAVLMDVGEENNIHPMDKEKGGDRLAFQALARTYGIEGFEFESPKYKSMEIKDGAVTVSFDDVNN GITSYDKEVLGFEIAGADKVFYPAKTVVRRKSVVLTSDKVKNPVAVRYLWKDFAKAELFSAGGLPVSSFRTDEW
Sequences:
>Translated_474_residues MKKTIIALLTILASLQINAKIKLPALFSDNMMLQQKSNALIWGWAEKNANIVIKTSWDSKTYKVKADASGKWKTELKTVS FGGPYTIEVSEGNEKVTIKNVLLGEVWLCSGQSNMEMPLKGFQGQPVKNGNEIIVRSANKNIRLITIPRATVLEPLQDFE GKWEEASPKSTSNFSATAWYFGSLLQEVLNVPVGLIHVSYGGSSMEAWMNQEMLKDFASAKIPTTKEELAKDPNRVPTTL FNGMLSPVIGYGIKGCIWYQGESNYERASEYTALMKKMVSSWRALWNQGDFPFYFAQIAPFNYASFHPKDYLEKYNSAYL REAQLKASKEIPNSAMAVLMDVGEENNIHPMDKEKGGDRLAFQALARTYGIEGFEFESPKYKSMEIKDGAVTVSFDDVNN GITSYDKEVLGFEIAGADKVFYPAKTVVRRKSVVLTSDKVKNPVAVRYLWKDFAKAELFSAGGLPVSSFRTDEW >Mature_474_residues MKKTIIALLTILASLQINAKIKLPALFSDNMMLQQKSNALIWGWAEKNANIVIKTSWDSKTYKVKADASGKWKTELKTVS FGGPYTIEVSEGNEKVTIKNVLLGEVWLCSGQSNMEMPLKGFQGQPVKNGNEIIVRSANKNIRLITIPRATVLEPLQDFE GKWEEASPKSTSNFSATAWYFGSLLQEVLNVPVGLIHVSYGGSSMEAWMNQEMLKDFASAKIPTTKEELAKDPNRVPTTL FNGMLSPVIGYGIKGCIWYQGESNYERASEYTALMKKMVSSWRALWNQGDFPFYFAQIAPFNYASFHPKDYLEKYNSAYL REAQLKASKEIPNSAMAVLMDVGEENNIHPMDKEKGGDRLAFQALARTYGIEGFEFESPKYKSMEIKDGAVTVSFDDVNN GITSYDKEVLGFEIAGADKVFYPAKTVVRRKSVVLTSDKVKNPVAVRYLWKDFAKAELFSAGGLPVSSFRTDEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=495, Percent_Identity=25.2525252525253, Blast_Score=151, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53078; Mature: 53078
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIIALLTILASLQINAKIKLPALFSDNMMLQQKSNALIWGWAEKNANIVIKTSWDSK CCHHHHHHHHHHHHHEECEEEEECEEECCCEEEEECCCEEEEEEECCCCCEEEEECCCCC TYKVKADASGKWKTELKTVSFGGPYTIEVSEGNEKVTIKNVLLGEVWLCSGQSNMEMPLK EEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECEEEEECCCCCCCCCCC GFQGQPVKNGNEIIVRSANKNIRLITIPRATVLEPLQDFEGKWEEASPKSTSNFSATAWY CCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH FGSLLQEVLNVPVGLIHVSYGGSSMEAWMNQEMLKDFASAKIPTTKEELAKDPNRVPTTL HHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHH FNGMLSPVIGYGIKGCIWYQGESNYERASEYTALMKKMVSSWRALWNQGDFPFYFAQIAP HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC FNYASFHPKDYLEKYNSAYLREAQLKASKEIPNSAMAVLMDVGEENNIHPMDKEKGGDRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCCCCCHH AFQALARTYGIEGFEFESPKYKSMEIKDGAVTVSFDDVNNGITSYDKEVLGFEIAGADKV HHHHHHHHHCCCCEEECCCCCCEEEECCCEEEEEECCCCCCCHHHCHHHHEEEEECCCCE FYPAKTVVRRKSVVLTSDKVKNPVAVRYLWKDFAKAELFSAGGLPVSSFRTDEW ECCHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTIIALLTILASLQINAKIKLPALFSDNMMLQQKSNALIWGWAEKNANIVIKTSWDSK CCHHHHHHHHHHHHHEECEEEEECEEECCCEEEEECCCEEEEEEECCCCCEEEEECCCCC TYKVKADASGKWKTELKTVSFGGPYTIEVSEGNEKVTIKNVLLGEVWLCSGQSNMEMPLK EEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECEEEEECCCCCCCCCCC GFQGQPVKNGNEIIVRSANKNIRLITIPRATVLEPLQDFEGKWEEASPKSTSNFSATAWY CCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH FGSLLQEVLNVPVGLIHVSYGGSSMEAWMNQEMLKDFASAKIPTTKEELAKDPNRVPTTL HHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHH FNGMLSPVIGYGIKGCIWYQGESNYERASEYTALMKKMVSSWRALWNQGDFPFYFAQIAP HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC FNYASFHPKDYLEKYNSAYLREAQLKASKEIPNSAMAVLMDVGEENNIHPMDKEKGGDRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCCCCCHH AFQALARTYGIEGFEFESPKYKSMEIKDGAVTVSFDDVNNGITSYDKEVLGFEIAGADKV HHHHHHHHHCCCCEEECCCCCCEEEECCCEEEEEECCCCCCCHHHCHHHHEEEEECCCCE FYPAKTVVRRKSVVLTSDKVKNPVAVRYLWKDFAKAELFSAGGLPVSSFRTDEW ECCHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA